Gambusia affinis (western mosquitofish): 122826855
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Entry
122826855 CDS
T07758
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122826855
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122826855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
122826855
NCBI-ProteinID:
XP_043965118
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All DBs
Position
LG24:8233187..8245887
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AA seq
922 aa
AA seq
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MGQKDHVEAGAVLHLAPHLEYLHVAGTDRQAGGLDGPPAMEEQAENFTTTATVGSPPEES
GGSDGERKTAPPATADSERGEVSYTSSKNTHQPLCRTPCVDLGTEGPPEPPSVPSGEPER
EPADSPAPEPEPKLAGKDYQAKLEFALKLGYSEETVRQVLSKLGPDTLINDILGELVKLG
TKPDGEQPAGTLTSTSSSSSSSSDVLDGQRSDSPLPSESVCDQDNLRPIVVDGSNVAMSH
GNKEVFSCQGIQLAVDWFVERGHQEITVFVPAWRKEQSRPDAPITDQEILRRLEKEKILV
FTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSF
VNDKFMPPDDPLGRHGPSLDNFLRKRPILPEQKKQPCPYGKKCTYGHKCKYYHPERGAQP
QRAVADELRASAKSCVPSKNQGDTGLVKSHSVPTGTIEAKSGAPKRQSDPSVRALSYSDA
EEKLLAKSRLESQKSNVGAGGSSSSSSSSSIGCSGGLAVSSSLAGPTPGFGLLQDQQSRS
GTHLPAPSHDLYPHCETPDLSYYSVTRAYCGLSLSSRRSPDCRYPNDPELRHGSMGSAGS
ECGSESSISCGSSDSYSDRSCPGCPPEPLLEESVHFPNPAGRLYAHHMASNHELCSLHAA
DYPSIQHNHTSNPAVHSYHLNAACGQSCLHEQPEGPPKRPLYPLPPHLQHQPLAARSSCP
GDYHSLPQSNHQPPGSPIGRCLAPTRSESVSDSHLYEHLSASHHHHRPKTLPSWETYYRQ
PSLPPSRYEPSAYQSLPDTHQSSWHPAPWPQEGYSSSHPALHPSPTRYLGHPPPPALSPH
PPYPPHSSHLALLSHPPPPYGPQHPESPVHCRYEDVREKAYVDLCNIFPSELVRRVMARS
PHVTDPQQLAAAILAEKAQSGY
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcgggagcagtcctccacctggcaccgcacctggag
tatctccacgtagcagggaccgaccggcaggctggcggccttgacggaccccctgctatg
gaggagcaggcggagaacttcaccaccaccgccactgttggttcccctccggaggagagc
ggtgggtctgacggcgagcgcaagacggcgccgccggccacagcagactcggagagagga
gaggtcagctacacttccagtaaaaacacccaccagccgctgtgccgcacgccatgtgta
gacctgggcacggaggggcctccggagcctccgtcggttccctcaggagaaccggagcgg
gaaccggccgactcccccgcaccagaaccagagcccaaactggcggggaaggactaccag
gcgaagctggagtttgccttgaagctgggttactctgaagagactgtgcgccaggtgctg
tccaagctgggacccgacaccctcatcaacgacatactgggcgaattggtcaaactgggc
accaaacctgacggcgagcagccagcgggaacattgacctctacctcatcgtcttcatca
tcctcgtctgatgtgctggacgggcagagatcggactctccactgccctcggagtccgtc
tgtgaccaggacaacctgcgaccgatcgtggtggacggcagcaacgtggccatgagtcat
ggcaacaaggaggtgttttcctgtcagggcatccagctggctgtagactggtttgtggag
cgcggccatcaggaaatcacggttttcgtgcctgcttggaggaaagagcagtcccgccct
gatgctccaataacggatcaggagatcctgcggcgcctcgagaaagaaaagatcctggtc
ttcaccccctcacggcgcgtccaaggtcggcgcgtggtctgctatgacgatcgcttcatc
gtcaagctggcttatgagtcagatggcatcatcgtctccaatgacaactacagagacctg
gctaatgaaaagcctgagtggaagaagttcatagacgagcggctgctcatgtattctttt
gtcaatgacaaatttatgcctccagatgaccccctcggacgtcacggccccagcctggac
aacttcttgaggaaaaggccaatcctgcctgagcagaagaaacaaccctgtccatatggg
aaaaagtgcacgtacggccacaagtgcaagtactaccaccctgagagaggagcgcagcct
cagcgcgccgtggccgatgagttgcgtgccagtgccaagagctgcgtcccctccaagaac
cagggcgatactggactggtgaagagccacagtgtgccaactggtaccatcgaggcaaaa
agcggtgccccaaaaaggcaatcagatcccagcgtccgagctctgtcgtacagcgacgcc
gaggaaaagctgctggcgaaaagtagactagaaagccagaagagcaacgtgggagcaggt
gggagcagcagcagcagttctagtagcagcatcggctgtagcggaggtttagctgtgtct
tcatccctggcaggaccgacacctggttttggtcttttgcaagaccaacagtccagatca
gggacacatctaccggcccccagccatgatctctaccctcactgtgagactccagactta
agctactactctgtgacacgggcctactgcggcctgagcctctcctcccgacgaagcccg
gactgccgctaccccaacgatccggagctgcggcacggctcgatgggctccgcaggttct
gaatgcgggagcgaaagcagcatcagttgcggtagcagcgactcgtatagcgaccgatct
tgtcccggatgccccccagaacctttactagaagaaagcgttcatttccccaaccctgcc
ggccgcctgtacgctcatcacatggcttctaaccacgagctgtgcagtctgcatgcggca
gattacccaagcatccaacacaaccacacctctaatccagccgtccattcctaccatctg
aatgctgcgtgtggacagagctgtcttcatgagcagccagaggggccccctaagcggccc
ctttaccctctgcctcctcacctccaacaccagccgctagctgcccgctccagctgcccc
ggcgactaccactctctgcctcagtccaaccatcaaccccctggatctcccattggccgc
tgcctggcccccactcgcagcgaaagcgtgtccgactcgcatctgtacgaacatctctcc
gcctctcaccaccaccatcgacccaaaacgctgcccagctgggagacgtattacagacag
ccgtcgctcccaccatcaaggtacgagccgtcggcctaccagagtctgcctgatacgcat
cagtcgtcctggcacccggcaccgtggcctcaagagggctacagctcgtctcacccagct
ctgcacccgtccccgacacgttacttaggccacccgccgccaccagccctctctccccac
cctccttacccgcctcacagctcccatctcgctcttctgtcgcaccctccccctccgtac
gggccgcagcaccccgagtcccccgtgcactgccgctacgaagacgtgagggagaaggcg
tacgtcgacctttgcaacatcttcccctcggagctggtgaggcgtgtgatggctaggagc
ccccatgtcacggacccccagcagctggctgccgccatcttggcagagaaagctcaaagt
ggctactga
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