Gambusia affinis (western mosquitofish): 122826868
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Entry
122826868 CDS
T07758
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04136
Autophagy - other
gaf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122826868 (atg13)
04136 Autophagy - other
122826868 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122826868 (atg13)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122826868 (atg13)
Membrane trafficking [BR:
gaf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122826868 (atg13)
Atg1 complex
122826868 (atg13)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122826868 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122826868
NCBI-ProteinID:
XP_043965139
LinkDB
All DBs
Position
LG24:8683856..8690172
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AA seq
533 aa
AA seq
DB search
MDGDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSSRQFERSAPIMGIIVDHFVDAPCGNQRPITMGQPCNFRAPDED
DGGGFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHNL
YASRLTYQPAPAGGAAEFNINQVKEGGNILVLAQPQPPHGADVHLTVENAPNTPSSSGDE
DGLLQSGEGRRDDGRSVSPSDPVESLSAFTRKVGAFVNKPNTQLTAASLDLPFAAFAPRG
LDSEENDPMVRPPDSPPSQSPLQASLHSQGSDGSGPQDDFVMVDFRPAFSKDDLLPMDLG
TFYREFQNPPQLASLSLHTSSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacctgagtccacaggataagaaagacttggacaagttcatcaagtttttt
gccttaaagactgttcaggtgatcgttcaagctcgcctgggggagaagatctgcactcgc
tcgtcttcgtcacccactggctcagactggtttaatttggccatcaaagacatcccagag
gtcactcatgaggccaagaaggcgctggccggccaacttccaggcatcggccgatccatg
tgtgtggagatctccctaaagacctcagagggagactccatggagttagagacttggtgc
ctggagatgaatgagaagtgcgataaggacattaaagtgtcgtacacggtctataaccgg
ctgtctgtcctcctaaaatctctactggccatcaccagagtgactcccgcctataagctg
tccaggaagcagggccacgactacgtcatattatacaggatctactttggggaagtccag
ctgggtggattaggagaaggtttccaaacggtgcgcgtcggtgttgtcggcaccccggtc
ggcacggtaacgctgtcatgtgcctaccgcaccaacctggcgttcatgtccagcaggcag
ttcgaacggtcggctcccatcatgggaatcattgtggatcactttgtggacgcgccctgc
ggcaatcagcgtccaatcacaatggggcagccctgcaacttcagagccccggatgaggat
gacggcggagggtttgctggagttcaggactctcaggaggtctgtaccacctccttctcc
acctcccctccctctcagtgtgtctgcactctgagtccgtccccttccaaactgtccaag
cccctcccgctggacagtctccagctcccattggctccaggacttgtcactcacaatctc
tatgcttccaggttgacctaccagcctgcacctgcaggaggagctgctgagttcaacata
aaccaggttaaagaaggggggaacattctggttctggctcagcctcagcctcctcatgga
gccgatgtccatctgactgtagaaaacgctccaaacacaccgagcagcagtggcgatgaa
gacggcctactgcagagcggtgagggaagaagggacgatgggaggagcgtctctccctct
gacccagtggagtccctcagcgcgttcacaaggaaggttggggcttttgtgaataaaccc
aacactcagctaacagctgccagtctggacctcccattcgctgcatttgctcctcgtggc
ctggactctgaggagaacgaccccatggtgcgtcctccggactctcctccctcgcagtcg
cccctgcaggccagccttcactctcagggctcggacggatcgggaccgcaggacgacttc
gtcatggtcgactttcgtccagctttctctaaagacgaccttttgccgatggatctgggc
actttctatcgagagtttcaaaaccctccacagctggccagcctctcgctgcacaccagc
tcccagtcgatggctgacgacctggactctctgccggagaaactgcgtgtgtatgagaag
aacattgacgaatttgacgcgtttgtggacatgcttcagtag
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