Gambusia affinis (western mosquitofish): 122826909
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Entry
122826909 CDS
T07758
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122826909 (gtf3c3)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
122826909 (gtf3c3)
TFIIIC, fungi type
122826909 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_8
TPR_1
TPR_14
TPR_19
TPR_7
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_9
TPR_10
ARM_TT21_5th
ANAPC3
PknG_TPR
HAT_PRP39_C
TPR_21
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
122826909
NCBI-ProteinID:
XP_043965219
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All DBs
Position
LG24:complement(9116235..9132942)
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AA seq
923 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDRRRDERKAEDSEEFTEDENKPSTSAQTKSAIEDGVSPG
VQQAFASILGETAAAASSEEEDSLSYVDDKDDRDFNVEEEEEAKGVTKERKRRLRQGGKR
GLKSKLEDEEEEEDMTVGDVFKLEMELNRENRRLMKGRRHGSKLPQALRGLMGEANIRYA
RGEKEDAILMCMEIIRQSPLAYEPFSTLAMIYEDSGDVDKALQFGLIAAHLNPSDCEEWI
RLADMSLEQDNVRQAIICYTKAIKYDPTNVRYLWERSSLQMRLGEHKQCMDGYRKILSLL
PQEDGEHFMQLSKDMAKSYYESNDLPSALSVIEEGLARHPGLVSDDFLNMAAELYICNRQ
YKKTLQVLVKFADIVLIRAASPSESSALSVKDMVTEEQQKEGEEGTKSNTAEDNDEILDV
QVPDSVPVDLRAKLIVCLIQLNVFSPSEGLVSTLMEQSPEEIGDLYLDVAEAYLEQGRYT
SALPLLSALVVSEKYDLAVVWLRHAECLKALGHMKAAAESYTKVVEMAPLHLEARLSLAT
VQQQLGRMDCALKALESMYDSDTLAQDSSAAQKELKLLLHRSTLLKTQGKMEDYLDAMIT
MISMLLKVAMQRAKVCVRSVTLAGQNHLRLVKIEDMLPEIADHESAYLDNMCKTNVLSKE
DWWQLLLSCLLGLCDLQRYEEVDLLVESAMEFYSFYDNKPRRKELEFFGLSATVLNQNYY
KAYNYIRLMLIENVDLPQFWNIFHQLTISSQHQRHHRFCLRLLLKHPDNHALCVLCGHNA
MVSGSFKHALGQYIQALKTHPENPLHSLYVGLTFFHMASQKYVAKRHALVLQGFSFLWRY
VELRGECQESLYNLGRALHQMGLTHLAIHYYQKALSLPAWKLDGISGDQVDLRREIAFNL
SLIYQSSGNMEMARQLIRTHCTI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggttcagcgcagaacttatcgactacctggaaggtagaataaccttcgaagag
tttgacagacggagagacgagcggaaagcggaggactcagaggaatttacagaagatgaa
aacaaaccttcaacctcggcacaaacaaaatctgctattgaggacggagtcagcccagga
gtacagcaagcctttgcttccattctgggagaaacggcagcagcagcgtcttcagaagag
gaggacagcttgagctatgttgatgacaaagatgatagggatttcaatgtggaggaggaa
gaggaggcaaagggagtgaccaaagagaggaagaggaggctgaggcaaggaggcaaaaga
ggcctgaagagcaagttggaggatgaggaggaggaggaggacatgacggtgggagacgtg
ttcaagctggagatggagctgaaccgagaaaacagaaggttgatgaaggggcgtcgtcat
ggcagcaagctgcctcaggctctcagggggctgatgggagaggccaacatccgttacgct
cggggggagaaagaggatgccatcttgatgtgcatggagatcataagacaatctcctctg
gcctatgagccattctccactctggccatgatctatgaggacagtggagatgtggacaaa
gcgctgcagtttggactcatcgctgcccacctcaacccttcagactgtgaggagtggatc
cgactggccgacatgtctcttgagcaggacaacgtccgacaggccatcatctgctacacc
aaagccatcaagtatgatcccaccaatgtccgctacctgtgggaacgctccagtctccag
atgcgcttgggggagcacaagcagtgcatggacggctaccgcaagatcctgtctctgctg
cctcaggaggatggggagcacttcatgcagttgtccaaagacatggctaagagttactat
gagagcaatgacctgccctcagcattgagtgtgatagaggaaggtctggcccgacaccct
ggcttggtcagcgatgatttcctcaacatggcagctgagctctacatttgcaaccgccag
tacaagaagaccctgcaggttctggtcaaatttgcagacattgtgttgattcgagcagcg
tctccatcagaaagctcagctctgtctgtgaaggacatggtgacagaggagcagcagaag
gaaggggaagagggcacaaagtcaaacactgcagaggacaacgatgaaattctggatgtt
caggttccagacagtgtcccagttgatctcagggccaagctcattgtctgcctcatacag
ctaaatgttttctcaccgtctgagggcttagtgtcgactttgatggaacagagtccagag
gagatcggggacctgtacctggacgtggctgaagcttacttggagcagggacgctacacg
tctgctctgcctttgctgtcggccctcgtcgtctctgagaagtacgacctagctgtggtc
tggctgcggcacgcagagtgtcttaaggccctgggccacatgaaggcggcagcagagagc
tacaccaaggtggtggagatggccccgctgcacctggaggcccggttgtctctcgccacg
gtgcagcagcagctggggcggatggactgtgctctgaaagcgttggagtccatgtacgat
agcgacacgctggcccaggattcgtccgctgcacagaaggaattgaagctgctgctgcat
cgctccacactgctgaagactcagggtaagatggaggattatctggacgctatgatcacc
atgatctccatgcttctcaaggttgctatgcaacgggccaaggtgtgtgttcgttctgta
actctagcaggacagaaccacctgagacttgtgaagattgaagacatgctgccagaaatc
gccgaccatgaaagtgcctatctggacaacatgtgtaaaaccaacgttttatccaaagag
gactggtggcagctgttgctcagctgcctgctgggcttgtgtgacctgcagcgttacgag
gaggtggatctcctggtggagtcggccatggagttctactccttctatgacaacaagccc
aggaggaaggagctggagttctttggcctctctgccaccgtcctaaaccaaaactactat
aaggcatacaactacatcagattaatgcttatagaaaatgtagatctacctcagttttgg
aacatttttcatcagctgacaatatcgtcccagcaccagcgccaccaccgcttctgtcta
cggctgctgttaaagcatcctgacaaccatgcactgtgtgttctgtgcggacacaacgcc
atggtgtctggaagcttcaagcacgctctgggacagtacattcaggctttaaagacccac
ccagaaaacccactgcacagcctttatgtgggtctcacctttttccacatggcctcccag
aagtatgtagccaaacgtcatgctctagtactgcagggattttccttcttgtggcgatac
gtggagctgcgtggagagtgtcaggagagcttgtacaatctgggccgagctctgcaccag
atgggccttacacatttggccatacattattaccaaaaggcgctgtcgctacctgcatgg
aaactggatggaatctcaggagatcaggttgatttgaggagagagattgcttttaactta
tcactcatctatcagtccagtgggaacatggagatggcccggcagctcatcagaactcat
tgcactatatga
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