Gambusia affinis (western mosquitofish): 122826955
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Entry
122826955 CDS
T07758
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122826955 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122826955 (ttc37)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122826955 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_19
TPR_8
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_9
TPR_7
ANAPC3
TPR_MalT
PknG_TPR
TPR_15
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
122826955
NCBI-ProteinID:
XP_043965312
LinkDB
All DBs
Position
LG03:complement(12318881..12334280)
Genome browser
AA seq
1569 aa
AA seq
DB search
MSNKEVKAALKSAREAINNKEFKEVLKHCKAVLKLEKNNYNAWVFIGKAASELEQPDQSQ
AAYRKAVELEPEQLLAWQGLANLYENTDQWDFKDELPSVYQRLVELYAKTDKTKSYDMIK
KLSDIYQSDREYLKLAKVWLQLVQLKEEEGVDKKELVQLLQKMTHLLSDCINDEEQDNET
QQHLITAFEKAMILTEPVPGEEHKKLSADYIKCLSKLPHEESKMKEACQSMSSVYPNQTY
PLEVLCSHYLKTNNMGEDAVGCFSRLLEMAPNSGLGHLGLGTKALLEGRYNEAVDDLEKG
IKKMSSATGWHSLAEAQFKIHRHSESTASCSQGLNVCTSEDKELRDKLLRLKLEALVRSE
GEQAASQALETFSQITEAEKDPVLLALKGRAYLNKGQIDQSLKLLSELEVSNPSLPQGLA
LRGLAHLAEGQLQLAEQSFLQATKQTPDSGEYFFFLGKLYWDMGSETRKDRSKTHTHLLK
AAKLDPHLGCAFRYLGHYYREVANDVARAQGCYRKAFQLNSGDAESGAALVDLSMGQGDM
DSALATLESVTEKATPGSAKWAWMRRGLYYLKTGEHQQAIADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVDEYLQITTQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAVDLIQQSIHNLFRAVQLRPDLSCLWKLLGDACT
AVRVVSPSRAQVVVPTLLSGFDSSTQDHVLNQAQTLKAGERCYAHALKLMPEVASLWYDL
GLNYYHQATNSPRSTDEHQNSLDLEKAQQCLKKAIKMESGNYSYWNALGVISMSRGLESY
ALAQHCFIKSIEVEPNNVVAWTNLGTLYLTKDNIELAHEAFKIAQSLEPLYVNCWIGQAL
IAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAIS
AAHVALCKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSSSSSEMLVFSL
GSCARALCNSGQWDEAVQVYKSTPLQDLSDLVGLALAYCRAGLYPESISVYERALAVTSN
EKEKAYILTALAMLQHQQGNLDSAKTLLFKCSLLKEPISESLLCLCALGLVHSDATLAAA
ALTELLKQGSASGGVVEQRCLLTCSLLALQGNYSAVQREASRAVHSNPGNSSLWALLSRV
IPQYYPRKAQGGAVAGHIACLFSMTKGKRALLFSGVNQMACGRHTGEDPHRNALKTMQKA
VLLCPDDPATWAGLMAACHTENTSCYLSGSAPRRHSLEHTLMSVVSEKVRSVEEMERPLA
QALEGWVLQQAVSGLMQQGQLEQAEALCTQVLNVSPEHPAVMLSLTQVQCQRLLMADGGT
VLTEQVLEQLNKVVMMNPTNIGAWHWLADVYRSQGLLVQAVLAYRQSLQLALQLGAHSFQ
IASLLRLALLALGPCMAGLPGSEWKDLVMEATTEVLKLGSSPMALLFQALLQYVTKMTAR
ETRRLLERSVYVSPDDFPVTVVQVASWYLLRHLHAKNDQELLNVLLQHAKMNGNQRLLDF
YTELTSSSS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagtgaaagccgctttgaaaagtgccagagaggccattaacaacaaa
gagttcaaagaagtcttaaagcactgcaaggctgttctgaaacttgaaaagaacaattac
aatgcctgggtgttcatcggcaaggcagccagtgaactggaacaacccgatcagtcacaa
gcggcctacaggaaggcggtggagctggagcctgagcagctgctggcctggcagggttta
gcaaatctttatgaaaatactgatcagtgggatttcaaagatgagctgcctagtgtctac
cagaggcttgtggagctttatgcaaagacggataaaactaaaagctacgacatgatcaaa
aagctgtcggatatttaccagtctgacagggaatatttgaagctggctaaggtttggctc
cagctcgtccagctgaaggaggaagagggtgtggataagaaggagttggtgcagttactg
caaaagatgacccatctcctctccgactgcatcaatgacgaggagcaggacaacgagact
caacagcatttgataacggcgttcgagaaggccatgattctcactgagcccgtgccagga
gaggagcacaagaagctctcggctgattatattaaatgtctttcgaaactgccacacgaa
gaaagcaaaatgaaagaggcttgtcagtccatgtcgtctgtgtacccaaaccaaacctat
cctctagaggtcctttgcagccactatctcaaaacaaataacatgggtgaggacgcagtc
ggctgtttttcccgactcctggaaatggcccccaacagtggattgggtcacttaggtctg
ggtaccaaggctcttctggagggaaggtataacgaagctgttgatgacctggaaaaagga
ataaagaaaatgagctcagcaacgggatggcacagcctggctgaggctcagtttaaaata
cacagacactctgagagcactgcttcatgctcacaaggcctaaatgtttgtacgtctgaa
gacaaggagctgcgagacaaactccttcgactgaagctggaggctttagtgagaagtgag
ggagagcaggctgccagtcaggctttggagacattctcacagattactgaggctgaaaaa
gatccggttctgttagccctgaaaggacgtgcatacctcaacaaaggacagattgatcaa
tcgctcaagcttttgtcagagctggaagtctccaacccaagtctgccccagggattggct
ctgagaggtctggcacatttagcagaaggtcagcttcagctagcagagcagagcttctta
caggctacaaagcagaccccggacagcggagagtacttcttcttccttggaaaactttat
tgggatatgggctcagagacccgtaaagaccggagtaaaactcacacacacctgttaaag
gcagcaaagttagatccgcatctcggctgtgcatttcgctaccttggccattattaccgg
gaggtggcaaatgacgtcgctcgtgcacaggggtgctacaggaaggctttccagttaaac
agcggcgatgccgaatctggagctgctttggtggatctcagcatggggcagggagatatg
gacagtgcattggcaaccctcgagtcagtgacggagaaagccacaccgggctccgctaag
tgggcctggatgagacgaggcctgtactacctgaagaccggagaacaccaacaagccata
gcggacttgcaggctgctttgagggcagatcccgaggactgggtttgttgggaatgttta
ggtgaggcctacctcaaccgacggagcttcacagcagctctgaaggccttcggcaaagca
catcagctccagcccagctccatctacagcgtctaccaggcagctgccatcaaacagact
ctgggaaagttcaaggaagccgtggatgagtatttgcaaatcacaacacagcaggactat
gttcctgctctgaaaggcctgggggagtgtcagttgtctttggccaagagtttaatggag
gactgcagagatggaggcgccgttgacctcattcaacaatccatacacaacctcttcaga
gccgtgcagctgcgaccagacctgtcttgtctgtggaagctgctgggagatgcgtgcacc
gctgtcagagttgtttcgccaagcagagctcaagttgtggtgccgaccttgctgtctgga
tttgactccagcacgcaggatcacgtgttgaaccaagctcagacactcaaagctggcgag
aggtgttatgcccatgctttgaagctgatgcctgaggttgccagcctttggtatgacttg
gggctaaattattaccaccaggccacaaactcaccccgctctacagatgaacaccaaaac
tctctggacctggagaaggcacagcagtgcttgaaaaaagctatcaagatggagagtggg
aactacagctactggaatgccttgggagtgatttccatgtccagaggtctggagagctat
gctttggctcagcattgcttcatcaagtccatagaagttgagccaaacaatgttgtcgca
tggacaaaccttggtacgctgtatttaacaaaggacaacatagagcttgcgcatgaagcc
ttcaaaattgcacagtctttggagccactgtatgtcaactgctggattggtcaggcgctg
atcgcagaacgcgtgggaagctacgacactatggatcttttcaggcacaccactgagctc
agcacacatatggaaggagtcaaaggttacgcctactgggtttgttccacgctcctggat
aagagcaacagggacagtgaactgtaccgctacaacattgtgcaaatgaatgccatctca
gctgctcatgtagcactctgcaagtacacagaacgaatccagtctgacccagacgccttt
attatgctgggttaccttaacgaacatctgcaactgaagaggcaggccctacaagcatac
caaagagctgttgaacttcttcagtcctcgtcctcttctgaaatgttggtcttctctctt
ggcagctgcgctcgtgctttatgcaactcgggccagtgggacgaagcagtccaggtttat
aagtccactccacttcaggacctcagtgacctggtagggctggctttggcctactgcagg
gcaggactctacccagaaagcattagcgtgtatgagcgagccttggctgtgacctccaat
gagaaggagaaggcttacatactgactgctctggccatgctgcagcaccaacagggcaac
ctagactcagccaagacgctgcttttcaaatgctcattgttaaaggagcccatctcagag
tctctgctttgcttgtgtgcgctggggttggtgcacagcgacgccacgctagctgcagcc
gccctgactgagctgctaaagcaagggtctgcctcagggggggttgtagagcagcgatgt
ctgctcacctgctccttgctggcccttcagggcaactacagcgcagtgcaaagagaggcc
tccagagctgtgcacagtaatcctggaaattcctccctttgggctcttctgtccagagtg
atacctcaatactaccccagaaaggctcaggggggtgcagtagctggccacatcgcctgt
ctctttagtatgaccaaagggaagagggcgctgttgttcagcggcgtgaaccaaatggct
tgtgggagacacactggagaggatcctcacagaaatgcacttaagaccatgcagaaagct
gtcctgctctgccctgatgatccagcaacatgggctggattaatggcagcctgtcacact
gaaaacacctcctgttatctttctggctctgctcctcgccgacactcattggaacacact
ctgatgtctgtggtttctgagaaagtgcgcagcgtggaggagatggagcgccccctagcc
caggctctggaaggctgggtgttacagcaggctgtgtctggtctcatgcaacaaggacag
ctggagcaagcagaggctctctgcacacaggttctcaatgtgtcccccgagcacccggca
gtgatgctgtcactgacgcaggttcagtgccagcgcctcctcatggccgatggtggtact
gtccttacagagcaggtcctggagcagctaaacaaagtcgtaatgatgaaccccaccaac
attggagcatggcattggctggctgatgtgtaccgtagccagggcctcctggtccaggct
gtgctggcttacagacagagcctacagcttgccctgcagctgggcgcacacagcttccag
atagccagcctcctccgactggctctgctggctcttggaccctgcatggctggactccct
ggaagtgagtggaaggaccttgttatggaagccactacggaggttttgaagctgggctcc
tctcccatggccctcctcttccaggccttgctccaatatgtgaccaagatgactgcaagg
gaaacgaggcgtttgctggagaggtccgtttatgtttcacctgatgatttcccagtaacg
gtggtgcaggtggcgagttggtacctcctcagacacttgcacgccaaaaatgatcaagaa
ctacttaatgttcttctgcaacacgccaaaatgaatggaaatcaaaggttgttggatttt
tacacagaactaacatcttcctcatcatga
DBGET
integrated database retrieval system
