Gambusia affinis (western mosquitofish): 122826975
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Entry
122826975 CDS
T07758
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122826975
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122826975
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122826975
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122826975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Adaptin_N
HEAT_2
Cnd1
Sec7-like_HUS
ParcG
MMS19_N
MMS19_C
HEAT_DAAF5
TAN
Motif
Other DBs
NCBI-GeneID:
122826975
NCBI-ProteinID:
XP_043965341
LinkDB
All DBs
Position
LG24:complement(923812..945960)
Genome browser
AA seq
1621 aa
AA seq
DB search
MEEDEEEKMSSMEDLLDLVLQKDLGRRLQVGPEITELLLHPDRCPGLDQDQNLLDRMVDA
LASSWVNSSNYKVVLLGMEVLSALVDRLQERFRTQVGTVLPSLMDRLGDSKDQVREQDQA
LLLKVMDQSANPQYVWERMMGGFKHKNTRTREGLCLCLISTLNVFGSQSLTLNKIVPHIC
NLLGDPTSQVRDAAMFCLVEIYRHVGERVRIDLGKKGLPQSRLNMIFSKFDEVQRSGVMV
PSPLSGVVSAVVLTVTRQGGSRGGRGRSEEELSSTDKTFEDDESVDGGRSSSRAASVSGR
KAVSMGSFRRPSSASSSKSAGRDGSSAGAVDEEDFIQAFEDVPTVQIHSNREVEEAMTKI
RDVLSDDKKDWELRVAALKKLRSLLLAGALEFDCFLQQLRLLEASFKLSAKDLRSQVVRE
ACITLGHLSAVLGSRFDHAAEAIMPPLLNLVPNSAKVMATSGVAAIRLILRHTHCPRLVP
IISSSCSSKSVAVRRRCFEFVDLILQEWQTSSLDRHGALLMETIKKGIHDADAEARSVAR
KCYWSYQGHFSREAELLFQGLESAYQRALQAHLRSGDALVSLPASDRSSSSSQESLNRPL
AMKSSAGSSSSRGQHQGQHQGGAPHRPGAASSPATLQRSRSDVDVNASASARSRMPAVSA
AAAALPPGSYASLGRVRTRRTNGGTGATATDGRSRGKVVSQSQPGSRSGSPGRLLSSTYG
RILRPAAGGNGAPCSVSDKTRHRGHRSQGCSRETSPSRTAAARSRIPRPSMSQGCSRETS
RESSRDTSPARGFSPLASRPHSRSTSALSSAEGCSDRLAHQARISASVNAMRVLNTGTEV
EAAVADALLLGDSRSSKRRPVRRRFESPGIYSDDDANSDASSACSERSFSSRNGAGPHFL
RQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKGQRTLSRVELKRLCEIFTRMFADPHSK
RVFSMFLETLVDFIVLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFP
LELQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMDPADFVNSSETRLAVSRIITWT
TEPKSADVRKTLHTWAGEDRSSTASLPREGHQEERCKQAAQVVLIALFELNTPEFTMLLG
ALPKTFQDGTTKLLHSHLRSASAGIAMAAPGDSAGRTPPRPPGSRSSPLTSPTNHGGLSP
SRLWGWSADGLSKYPPLPPFPSPLPPSASLKALRRAYSPSMLEYDSENLNTEDLYGSLRG
VSEAIQNFSFRSQEELVEPLRRDVKRDGTVGVAAASDPERRYCGDMTEGGRTALDNKTSL
LNMPSPRSFSGPRFRDYNPYNYTDGSPEKPGPEDGAEPQRDGRRQESGENKTQNAKSFPA
GSAEQLELVGELLKELSQTGEQEDRRGALLELLKVARQDSLLVWDEHFKTLLLLLLETLG
DKDHSVRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASALAG
SIHPEQCIKVLCPIVQTTDYPVNLAAIKMQTRAVERVCREPLLQLLPDVVPGLLQGYDNT
ESSVRKASVFCLVAVYAVIGEELKPYLSQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISS
Y
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgaggaggagaagatgagcagcatggaggacctgctggacctggttctg
cagaaagacttgggccggcggctgcaggtggggccggagatcactgaactgctgctccac
ccggaccgctgtcccgggctggaccaggaccagaacctgctggacaggatggtggacgcc
ctggccagctcctgggtcaactccagcaactacaaggtggttctgctggggatggaggtt
ctgtcggctctggtggaccggctgcaggagaggttcaggactcaggtgggaacagtcctg
cccagcctgatggaccggctgggcgactcgaaggaccaggtgcgggagcaggaccaggcg
ctgctgctgaaggtcatggaccagtcggccaaccctcagtacgtctgggagcgcatgatg
ggagggttcaagcacaagaacacccggaccagagagggactctgcctctgcctcatctcc
accctcaacgtgtttggctctcagagtctgacgctgaataaaatcgttcctcacatctgc
aacctgctgggagacccgaccagtcaggtccgtgatgctgccatgttctgcctggtggag
atctaccgccacgtaggagagcgagtgagaatcgacctggggaagaaagggctgcctcaa
tcacggctcaacatgatcttcagtaagttcgatgaggtccagaggtcaggggtcatggtg
ccgtctcctctgtcaggagtggtgtcagctgtcgtcctcacagtcacaagacagggaggc
agcagaggaggaagaggacggagcgaagaggagctttcctccacagataaaacctttgag
gacgatgagtcggtggacggcggccgttcctcgtccagagcagcctctgtgtctgggagg
aaggcggtgagcatgggctcgttccgacggccatcctcagcctccagcagcaagtctgca
gggcgggacgggtcgagtgcaggagctgtggatgaggaggatttcatccaagcctttgag
gacgttcccacagttcagatccactccaaccgggaggtggaggaggccatgacgaagatc
cgggacgttttgtcggatgataagaaggactgggagctgagagtggccgccctgaagaag
cttcgctcgctgctgctggctggagcgctggagttcgactgctttctgcagcagctgcgg
ctcctggaggcgtccttcaagctgtctgccaaagacctgcggtctcaggtggtccgggag
gcctgcatcacgctgggccacctgtcggcggtgctgggcagccgcttcgaccacgccgcc
gaggccatcatgcctcccctcctcaacctggtgcccaacagtgccaaagtcatggccacg
tcgggcgtggccgccatccgcctcatcctcagacacacacactgtcctcgcctcgtcccc
atcatcagcagcagctgctcctccaagtctgtggctgtcagaagacgctgctttgagttt
gtggacctgattctgcaggagtggcagaccagcagcctggacagacatggagcgttgctg
atggagacgataaagaaggggatccatgatgctgatgctgaagctcgatctgtggccagg
aagtgctactggagctaccagggtcacttcagccgggaggcggagcttctgttccagggc
ctggagtcggcctatcagagagctctgcaggcccacctgcgcagcggagacgccctggtg
tcgctgccggcctccgaccgttcctcgtcctcgtctcaggagagcctgaatcggccgctg
gcgatgaagagctcagcaggaagcagcagcagcagaggtcagcaccaaggtcagcaccaa
ggtggcgccccccacaggccgggagccgcctcgtctccagccactctgcagcgatcccgc
agcgacgtcgacgtcaacgccagcgccagcgcccgcagcaggatgcccgccgtcagcgcc
gccgccgccgctcttcctcctggatcctacgcttcgctggggcgagttcggaccaggagg
acgaacggcggaaccggtgccacggcgacagacggccggagccgagggaaggtcgtctct
cagtcccagcccggcagccggtccggttctccgggccgcctgctcagctccacgtacggc
cggatcctgaggcccgccgcaggcggcaacggcgccccctgcagcgtgagcgacaagacg
cgacaccgaggtcaccgcagccagggctgcagccgagagaccagtccgtccagaaccgca
gccgcccggagtcggatccctcggcccagcatgagtcagggctgcagccgggagaccagt
cgcgagagcagccgcgacaccagccccgccaggggcttctccccgctggccagccggcct
cattcccgttccaccagcgccctgtcctctgcagagggctgctcagaccggctggcccat
caggcccggatctcggcctccgtcaacgccatgcgggtcctgaacacgggcaccgaggtg
gaggcggccgtggccgacgctctgctgttgggagactccaggagtagtaagcggcggccc
gtccggcggcgcttcgagtctcccggtatctactctgacgacgacgccaacagcgacgcc
tccagcgcctgctccgagcgctccttcagctccaggaacggcgccgggccccacttcctg
cggcagacggaggatgtggcggaggtcctgaaccactgcgccagctccaactggtcggag
aggaaggagggcctgctgggcctgcagaacttgctgaagggccagaggacgctcagccgt
gtggagctgaagagactctgtgagatcttcaccaggatgtttgcagaccctcacagcaag
agagtgttcagcatgttcctggagacgctggtggacttcatcgtcctgcaccgggacgac
ctgcaggactggctcttcgtcctgctcactcagctgctgaagaagatgggcgccgacctg
ctgggctcggtccaggccaaggtccagaaggctctggacgtcaccagggattcgttcccc
ctggagctgcagttcaacatcctgatgcgtttcatcgtggaccagacccagacgcccaac
ctgaaggtcaaggtggccatcctgcgctacatcgaggctctggcccgacagatggacccg
gccgacttcgtcaactccagcgagacgcgcctggccgtctcacgcatcatcacctggacc
accgagcccaagagcgccgacgtccgcaagacgctccacacctgggcaggtgaggaccga
agctccaccgcctctctgccccgggaggggcatcaggaggagaggtgcaagcaggcggcc
caggtggttctgatcgccctgtttgagctcaacaccccagagttcaccatgctgctggga
gcgctgcccaaaaccttccaggacggaaccaccaagctgctgcacagccacctgaggagc
gccagcgccggcatcgccatggcggctccaggcgactcagccggccggacgcctccccgc
ccccccggcagccgcagcagccctctgacctcgcccaccaaccacggcggcctctccccc
agtcggctgtggggctggagcgccgacggcctctccaaataccctcctcttcctcccttc
ccctcccctcttcctccctctgcctccctcaaggccttacggcgagcgtactctcccagc
atgctggagtacgacagtgagaacctgaacactgaggatctgtacggatccctgcgcggc
gtctctgaggccatccagaacttcagcttccgcagccaggaggagctggtggagccgctg
cggcgggacgtgaagcgggacggaacggtcggcgtggcggcagcatcggacccagagcgc
cggtactgtggcgacatgacggagggcggccggacggctctggacaacaagacgtccctg
ctgaacatgccttcgcctcggtcgttctccgggccgcgcttcagggactacaacccctac
aactacacagacggctcgccggaaaagcccggcccggaggacggcgccgagccacagaga
gacggccggcggcaggagagcggagaaaacaagacacagaacgccaagagctttccagcc
gggtcggcggagcagctggagctggtgggggagctgctgaaggagctgtcccagaccggg
gagcaggaggacaggcggggggcgctgctggagctgctgaaggtggcccgccaggacagc
ctgctggtgtgggacgaacacttcaagaccctgctgctgctgctgctggagacgctgggc
gacaaagaccactcggtccgggcgctggcgctccgggttctgaaggagatcctgcggaac
cagccggcccggttcaagaactacgcagagctgaccatcatgaagacgctggaggctcac
aaggactctcacaaagaggtggtgcgtgcggctgaggaggcggcctccgccctggccggc
tccatccacccggagcagtgcatcaaggtgctgtgccccatcgtccagaccaccgactac
cccgtcaacctggcggccatcaagatgcagactcgcgcggtggagcgcgtctgcagggag
ccgctgctgcagctgctgccggacgtcgttcccggcctgctgcagggctacgacaacacg
gagagcagcgtccgcaaggccagcgtcttctgcctggtggccgtctacgccgtcatcgga
gaggagctcaagccctacctgtcccagctgaccggcagcaagatgaagctgctgaatctt
tacatcaagagagctcagacctccaccagcaacagcagcagctcctccgacatctcctcc
tactga
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integrated database retrieval system
