Gambusia affinis (western mosquitofish): 122827065
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Entry
122827065 CDS
T07758
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00310
Lysine degradation
gaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122827065 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122827065 (setdb2)
Enzymes [BR:
gaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
122827065 (setdb2)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122827065 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122827065 (setdb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
122827065
NCBI-ProteinID:
XP_043965570
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All DBs
Position
LG24:complement(2902045..2906528)
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AA seq
601 aa
AA seq
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MGDVLDPRVVERAKSFWAEKDVEQVFTGVFQYLDHLKQALQKKTALDKEFVQAQRLLECL
DCVPLGSPPDQDSSVVQVVIGSGGLLPAHFNGLSPPAGREELLPPLAPVQLQYHPHPCCK
ACLPGLPRTPQSSSLLYTQNPLKVPLLCGFKRLSAMPLVSQTDTGPDGLDTAVAGGNWDV
IYKTPCGQSLRNFQDVESFLSATESHDVLQVDFFTFNHVVQLDPVPQDRVQLRDQPWPDL
SRGAEPVPVELVVEKGRARPAGFRYRKDRWPHGCFLSRGAALFDACCDCNDGCSDAQLCA
CVAMTTGGRGYSYQRLLEPVQSGLFECGPWCGCDRARCQNRLVQRGVRVRLQVFETEDRG
WGVRCRDDLDRGTFVCVYAGVVLQRARSPTEPLPPKLTRAELPSDDEVEVVTEWLAPPIL
EARSDLLEASPPPPGSTASTQHVPVIQRPGESSGASQNHDQVGGLFEVRVAVAMDSQEDG
SPTSFKRRAEREEVCFIDASKEGNVGRFINHSCQPNLFIQNVFTDSHDPAFPVIAFFTNR
VVKAGTELTWNYSSDAHTSSSKQEQEVPCLCRSNGCQGWLHLEEQLCDVCAAEGPGGTEE
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgttggatccacgggttgtggagagggcgaaaagcttctgggcggagaag
gacgtggagcaggttttcaccggggtcttccagtacctggaccacctgaagcaggccctg
cagaagaagacggctctagataaagagttcgtccaggcccagaggctgctggaatgtctg
gactgcgttcccctcgggtctcctccggaccaagactcctccgtggtccaggtggtcatc
ggttcaggagggctgctgccggctcacttcaatggactgtcgccccctgctggcagagag
gagctgctgcctccgctggcgccggtccagctgcagtatcaccctcacccctgctgcaag
gcctgcctgccagggttacccagaaccccccagtccagctcgctgctatacacccagaac
ccgctgaaggtgccgctgctgtgcggcttcaagaggctgagcgccatgcctctggtgtcc
cagaccgacaccggcccggacggcttggacacggcggttgctgggggcaactgggatgtc
atctacaagacgccgtgcgggcagagcctcaggaacttccaggacgtcgagtccttcctg
tcggcgacggagagccacgatgtcctgcaggtagacttcttcaccttcaaccacgtggtg
cagctggacccggtccctcaggaccgggtccagctgcgggatcagccatggcccgacctg
agccggggggcggagcctgttcccgtggagctggtggtggagaagggtcgggcccggccc
gcgggcttccggtaccggaaggaccgctggccgcacggctgctttctgagccgtggtgct
gcgctgttcgacgcctgctgcgactgcaacgacggctgcagtgacgcgcagctctgtgcc
tgcgtcgccatgacgaccggggggcggggctacagctaccagcggctgctggagccggtc
caatcaggcctgtttgagtgcggtccgtggtgcggctgcgaccgggcccgctgccagaac
cggctggtccaaagaggggtcagagttcgcctccaagtctttgagactgaggaccggggc
tggggggtccgttgccgtgacgaccttgaccgaggaacgttcgtctgcgtctacgcaggt
gtggttctgcagcgggcccgcagccccacggagccgctgccccccaagctgacccgggcc
gagctgccgtccgacgacgaggtggaggtcgtcacagagtggctggccccgcccatcctg
gaggcgcgcagcgacttgctagaggcctcgccccctccgccaggctccaccgcctccacg
cagcacgtcccggtgatccagagacccggcgagtccagcggcgcctctcagaaccacgac
caggtcggaggcctgtttgaggtgagggttgccgtggcgatggacagccaggaggacggc
agcccgacgagcttcaaacgacgagcagagagagaagaagtctgcttcatcgacgccagc
aaggagggaaacgtcgggcgcttcatcaatcacagctgccagcccaacctgttcatccag
aacgtcttcacggactcccatgatcccgccttccccgtcatcgccttcttcaccaacagg
gtggtgaaagccggcactgagctcacctggaactactcctctgatgctcacacctccagc
tcaaagcaggaacaggaagtgccttgtctctgccgtagcaacggttgccagggatggctc
cacctggaggagcagctgtgtgatgtctgtgcagctgaaggtcccggagggacggaggaa
aactga
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