Gambusia affinis (western mosquitofish): 122827262
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Entry
122827262 CDS
T07758
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
gaf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122827262
04082 Neuroactive ligand signaling
122827262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122827262
Ion channels [BR:
gaf04040
]
Ligand-gated channels
GABA-A
122827262
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122827262
NCBI-ProteinID:
XP_043965948
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Position
LG24:5565872..5677592
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AA seq
593 aa
AA seq
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MSVASSWCDLGTSIWLTVVSWRSSSSSPYSTVDQLEAERTHRASWVSRRSVKRVTASLTV
IFPRAEGSSACGNCWTGTPARTAAAAASAAAAAACRRNAVDGNKKLFAIYDTSVNEPGNM
SIVKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRD
KRLAYIGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR
ITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGVTRIELPQFSIV
DYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA
RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVNYIFFGR
GPQMQKKLAEKAEKANNERAAKYDAAREAGSRTASLKRSNQVKGLRHSRSAEPHGHGNIL
LTTLEIHNEVAGGEITTSVADIRNSQSMVQLDSSASSNIQYRKQSGGVGPRSTSRHSLDR
STQMKRSRLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYWLYYV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcgtcctcctggtgcgacctgggcaccagcatctggttgacggtggtgtcg
tggaggtcctcctcgtcgtcgccatattccactgttgatcagttagaagcagaaaggact
caccgagcatcctgggtgagcagaagaagtgtgaagagggtgaccgcgagcctgactgtc
attttcccacgggcggaaggcagctctgcttgcgggaactgctggacggggaccccggcg
cgcaccgccgctgctgctgcctctgctgctgctgctgccgcgtgcaggaggaatgctgtt
gacggaaacaagaagttgttcgccatttatgacaccagcgtcaacgaaccgggcaacatg
tccatcgtgaaggaaacggtggataaactactgaagggatacgacatccgactgagaccg
gactttggaggccccccagttgcagtcggcatgagtatagatgtggccagcatagacatg
gtgtcagaagtcaacatggactacacgctgaccatgtatttccagcagtactggagggac
aagcgtctagcctacattggaatcccattaaacttgactctggacaacagggttgcagac
cagctgtgggtcccagacacctacttcctcaatgacaagaagtcttttgttcacggagtc
acagtcaaaaatcgcatgattcgccttcacccagacgggactgtcctatatgggctcagg
ataacaacaacagctgcttgcatgatggacctcaggaggtatcccctggatgagcagaac
tgcactctggagatagagagctatggctacaccacagatgacatcgagttctactggaag
ggaggcgagtcggccgtaaccggtgtgacgcggatcgagctgccgcagttctccattgtt
gactacaaactagtttccagaaatgtagtcttttccacaggtgcctatcctcgactgtcg
ttgagcttcaagctgaagaggaacatcggctacttcattttgcagacatacatgccatca
atcctgatcaccatcctatcctgggtatccttctggataaactatgatgcatctgcagcc
agggtggctcttggaatcaccacggtgctgacaatgaccaccatcaacacacacctgagg
gagacgctacccaagatcccatatgtcaaggccatcgacatgtacctaatgggctgcttt
gtcatggtcttcctggcccttcttgagtacgcctttgtcaactacatcttcttcgggagg
ggccctcagatgcagaagaagttggcggagaaagcagagaaggccaacaatgagcgagcg
gccaagtacgacgcagcaagggaggcaggtagtaggaccgcgtccctaaaacggtccaat
caggttaaaggtcttcgccactcacgctcggcggaaccccatggtcatggaaacatcctg
ctgacaaccttagagatccacaatgaagttgcaggaggtgaaatcaccaccagcgtggca
gacattagaaactctcagtccatggtacagttggacagctcggcgtcgtcaaacatccaa
taccgcaagcagagcggtggggtagggccacgctctaccagccgccactctctggaccgc
tctacccagatgaagaggagccgactacggaggcggtcctcccagctcaaaattaaaatc
cccgacctgacggacgtgaacgccattgaccgctggtctcgcatcatctttccatccgtt
ttctcgctgttcaacctcatctactggctctactatgtctga
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