Gambusia affinis (western mosquitofish): 122827263
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Entry
122827263 CDS
T07758
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
gaf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122827263
04082 Neuroactive ligand signaling
122827263
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122827263
Ion channels [BR:
gaf04040
]
Ligand-gated channels
GABA-A
122827263
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
DUF5874
Motif
Other DBs
NCBI-GeneID:
122827263
NCBI-ProteinID:
XP_043965955
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Position
LG24:complement(5616965..5638678)
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AA seq
460 aa
AA seq
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MDPHSALNNMTWLVLSLLLLLGCQNSLCQQSSEAQKEEDANEDSTVFTRILDSLLDGYDN
RLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPLNN
LLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPM
DAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEDGSRLNQYHLIGQTADTEDIRTSRG
QYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTT
LSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKALEAQHP
KKRDPMVLSKKANNVCSAAVNYTPNLTKDASISTISNTTSVQLRGSESKLVDPKKTYNSV
SKIDKMSRIVFPVLFGTFNLVYWATYLNREPMVKGVVAST
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcattcagctcttaacaacatgacttggcttgtactttccctcctgctcctg
ctcggatgccaaaatagtctttgtcagcagtcgtcagaagctcaaaaagaggaggacgcc
aacgaggacagcacggttttcaccaggatcctggacagcctgctggatggctacgacaac
aggctccgcccaggactcggagagaacgtgacggagatcaagacgaacatctttgtcacc
agcttcggtcctgtgtctgacacagagatggaatacaccatagacgtgttcttccgtcaa
agctggaaggatgagcgtctctgcttcaaaggccccatggagatgctcccattaaacaac
ctgctggctagcaacatctggactcctgataccttcttcctcaatggtaagaagtccatc
gctcacaacatgaccacacccaacaagctgctgagactgaaggacgacggaaccctgctc
tacacaatgaggttgacaatctcagcagaatgccccatgcaactggaggactttcccatg
gacgcccacgcctgcccgctcaagtttggcagctacgcctatccagtatcagaggtggtc
tacacatggactcaaggagctgccaagtctgttgttgtggcagaagatggttctagactc
aaccagtaccatctcattggacaaacagctgacacagaggacatacgcaccagccgagga
caatacactgtgatgatggcgcacttctacctgaagaggaagatcggatattttgtcatc
cagacgtacatgccatgtttcatgactgtaatcctgtcccaggtgtcgttttggctcaac
agagagtccgttcccgcgcggaccgtgtttggggtgactacggtgctgactatgaccaca
ctcagcatcagcgccagaaactcgcttcccaaagtagcctacgcaacagccatggactgg
ttcattgctgtctgctatgctttcgtcttttcagctcttatcgagtttgccacagtgaac
tacttcaccaaaaggagctgggcttgggatggcaagaaagctctggaagcacagcaccct
aagaaacgagacccaatggtgctctcaaaaaaggccaacaacgtttgctcggcagctgtc
aactatacccccaaccttaccaaggacgcgtccatctccaccatctccaatacgacgtcg
gtgcagctgcggggttcagagagcaaactggtggaccccaaaaagacgtacaacagcgtc
agcaagatcgacaagatgtcgcgaatagttttccctgtcctctttggaaccttcaacctc
gtctactgggccacatacctgaacagggaaccgatggtgaagggagttgtcgcttccaca
taa
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