Gambusia affinis (western mosquitofish): 122827290
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Entry
122827290 CDS
T07758
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
122827290
NCBI-ProteinID:
XP_043965993
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Position
LG24:complement(10317412..10335449)
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AA seq
812 aa
AA seq
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MFHWWFSLVFPLLYPCMYRSSGSRLAACSAPPTEIKAKDFTRAAGKRTPRSCTILPTPLL
QPQLKKMMAVLLRFSCHVVFLLQPYVMNTADGGAYYGPKQPPQQQPQPIPQYSDDFPQQQ
FLGNEMPHSPFSKGIPSMSQHGKDAPQLPLPLQIGKIRPLTKGKGQTFPRGSKGPLPVPS
GKGFTGGPQGIEGPPGPVGPPGPQGPPGLPGQGIPGSPGKPGPPGSQGYKGNGKPGMPGL
PGKPGGPGLPGAKGDLGPIGGQGPTGLPGPPGLPGPTGLPGISKSGGQGLPGLQGQPGEP
GQNGPPGFPGPQGPKGDKGLGLPGFPGVNGPGGPPGPPGQVGLPGNGKPGLNGVPGQPGF
PGKPGPPGEAGLVGAPGQRGQPGLPGVPGIGKPGKDGVRGLPGFSGGKGEPGPPGLIGPP
GLPGYGKTGFPGPKGHKGHAGLPGQPGPKGDKGHVGQPGVIGLTGLTGIPGAPGPTGPPG
SLGFPGQKGEDGTFGPRGNPGVKGETGPPGLSGQPGRPGEGGQPGQRGFQGPIGPKGEAG
ARGLPGASGAAGLQGPKGEGGDSGNKGQPGPQGIPGLTGPGGPIGPPGHPGQKGETGPTG
NPGYPGNGAPGTPGQIGPQGNPGPSGFPGLPGQPGPPGPPGPPGMFTESPDIIQFLPHTG
PYNGQVPKKPGNGVEISGTNQQIPAFTAKLTNPFPLVGSPITFDKLLHNGNQDYNPQNGI
FTCSIPGIYYFAYHVHCKGGNVWVALMKNSKPVMYTYDEYKKGLLDQASGSAVLPLRKGD
TVHVELPSDQAAGLYAGQYVHSTFSGYLLYLM
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgttccactggtggttttctcttgttttccccttactttacccttgcatgtacagatcc
agtggctctcgtctcgctgcgtgttctgctccacccaccgaaataaaagccaaagatttc
acccgagctgctgggaagcgaactcctcggagctgtacgatactcccaactccgctgctg
cagccacagttaaagaaaatgatggctgtacttctccgtttctcctgccatgttgtcttt
ctactccagccatatgtaatgaacacagctgatgggggagcatattatggaccaaagcag
ccacctcagcagcagcctcagcccatcccgcagtacagcgatgactttcctcagcagcag
ttcctggggaacgagatgccacattcacctttcagcaaagggatcccatctatgtcccag
catggaaaagatgctccacaactgccattgcctttgcaaattggaaaaattagaccattg
acaaaaggcaaaggacaaaccttcccaaggggatctaaaggtcctcttcctgttcctagt
gggaaaggtttcacaggtggacctcaaggcattgaaggcccccctggaccagtgggccct
ccaggtccacaaggcccccctgggcttccaggacaggggattcctggatcaccaggaaag
ccaggtcccccgggttctcagggatacaagggaaatggaaaacctggaatgccaggattg
cctggaaaacctggaggccctggattaccaggagcaaaaggggatcttggaccaattggt
ggtcaagggccaacaggacttcccgggcctccaggactcccaggtcccactggactccct
ggaatttcaaaatcaggaggccaggggttaccaggactgcaagggcaaccaggagaacct
ggccaaaatggtccacctgggtttcctggtcctcaaggtccaaaaggcgataaagggctt
ggactgcctggttttccaggtgtgaatggacctggtgggccacctggtcctcctggacaa
gtgggcctccctggcaatggcaaacctggtctgaatggtgtacctggacaaccaggattt
ccaggaaaaccgggtcctcctggagaagcaggactagtaggagcaccaggtcaaagaggg
caaccaggacttccaggtgtaccaggaataggaaaaccaggaaaagatggtgttagaggg
ttaccagggttctctggaggaaaaggtgaaccagggcctcctggtttaattggaccacca
ggcttgccaggttatgggaaaacaggatttccagggcctaagggtcacaagggacatgct
ggtcttccaggacaaccaggcccaaaaggtgacaaaggtcatgtaggtcaacctggagtt
attggtctaactggtttgacaggaatacctggggcaccagggcccaccgggcctcctggt
agtcttggcttcccaggacagaagggagaagatggcacatttggccctagaggaaatcct
ggagtgaagggtgaaactggacctccaggtctttcaggacagccaggtaggccaggagag
ggtggacaacctggacaaagaggattccaagggccaatagggccaaaaggagaagctggg
gctagaggtttacctggtgcctctggtgctgcaggattacaaggaccaaaaggagaggga
ggagattctggaaacaagggccaaccaggtccacaggggatccctggacttacaggacca
gggggaccaattggacctcctggtcatccaggacaaaaaggtgaaacaggaccaacaggt
aaccctggttatcctggtaatggggccccaggaacccctggtcaaattggtcctcaagga
aaccctggtcccagtggttttcctggacttcctggacaacccggccctccaggtcctccc
ggccctccaggaatgtttactgaatctcctgacattattcaattcctccctcacacaggc
ccctacaatggacaagttcccaaaaagccaggcaatggagttgagattagtggaaccaat
cagcagattcctgcattcactgcaaaactgacaaatccgttccctctagtaggctcccca
atcacatttgacaaacttctccacaacggaaatcaggactacaatccacaaaatggtatt
tttacatgtagtataccaggaatctattattttgcttaccacgtccactgcaagggaggc
aacgtttgggtggcgctgatgaagaacagtaagccagtaatgtacacttatgacgagtac
aaaaagggtttgcttgatcaggcttcaggaagcgctgtactcccattgagaaaaggagac
actgttcatgtagagcttccatcagaccaggcagcaggactttatgctggtcagtatgtc
cattccacattttctggatacttactgtacttgatgtaa
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