Gambusia affinis (western mosquitofish): 122827315
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Entry
122827315 CDS
T07758
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122827315 (ddx4)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122827315 (ddx4)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122827315 (ddx4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122827315
NCBI-ProteinID:
XP_043966052
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Position
LG24:complement(10072178..10077733)
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AA seq
639 aa
AA seq
DB search
MDEWEEEETKATTFPAASYSSNDAAGRDSWKSDHGEFGRGRGGKGRGRGGFWNSSADGDT
RDSNEDGERHGFSGRGGRGRGRGFNRMNSESFSEDGDGAHENGFRGRGRGGRGGRGGFRQ
DAEQGGRGGFGGGYRGKDEETFNPGEDKGPVKDDPDGEKPRVTYVPPTLPEDEETIFSHY
KSGINFDKYDDILVDISGTNPPRAIMTFDEAAMCESLSKNISKSGYVKPTPVQKHGIPII
SAGRDLMACAQTGSGKTAAFLLPILQQLMTDGVAASRFSETQEPEAVIVAPTRELINQIY
LEARKFAYGTCVRPVVVYGGVNTGHQIREILKGCNVVCGTPGRLLDMIGRGKVGLGKVRY
LVLDEADRMLDMGFEPDMRRLVGSPGMPSKENRQTLMFSATYPEDIQRMAADFLKPDYLF
LAVGIVGGACSDVEQKFVQVTKFSKREQLLDILKTTGTERTMVFVETKRQADFIAVFLCQ
EKVPTTSIHGDREQRERELALTDFRSGKCPVLVATSVAARGLDIPDVQHVVNFDLPKDID
EYVHRIGRTGRCGNVGRAVSFFDPEVDGALARSLVTVLSKAQQEVPPWLEESAFSSHGAG
YNPRKTFGSTDSRKTGSFQENSGPSQAAAQAAADDEEWE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagaagaggaaactaaagcaactacatttccagcagccagctattcc
tctaatgatgcggcaggaagagactcatggaaaagtgatcatggtgaatttggacgaggt
cgaggaggcaaagggagaggcagaggaggattttggaactccagcgcagacggagatact
agggattctaacgaagacggggaaagacatggtttcagtgggagaggcggtagagggcgt
ggccgaggattcaacaggatgaactcagagagtttctctgaggatggtgatggagctcat
gagaatgggttcagagggcgaggaagaggaggtcggggaggaagaggaggattcagacaa
gatgctgaacagggaggaagaggaggcttcggtggaggttaccgtggaaaagacgaagag
accttcaatccaggagaagacaaaggtccagtcaaggacgaccctgatggtgaaaaaccg
agagtcacatacgttcctccaacgctccctgaagatgaagagaccatcttctcccactat
aagagtggaatcaactttgacaagtacgacgacatcttggtggacatcagtggcaccaac
ccccccagggccatcatgacctttgacgaggcggccatgtgtgagtccctgagtaaaaac
atcagtaagtctggctatgtgaagccgaccccggtgcagaagcatggcatccccatcatc
tctgcaggcagagacctcatggcctgcgcccagaccggctctgggaagacggccgctttc
ctgctgcccatcctgcagcagctcatgacggacggcgtggcggccagtcgcttcagtgag
acgcaagaacctgaagctgtcatagtcgctccaaccagagaactcatcaaccagatctac
ctggaggccaggaagtttgcttatgggacgtgtgtccgacccgttgtggtctatggagga
gtcaacactggacaccaaatcagggaaatcctgaaaggctgtaatgtggtgtgtggaact
cctggacgtctgctggacatgattggaagagggaaggtgggattgggtaaggtgcggtac
ctggtgctggacgaggccgaccggatgttggacatgggctttgagccagacatgcggcgc
ctggttggctccccagggatgccgtccaaggaaaatcgtcagactctgatgtttagcgcc
acctaccctgaagacatccagaggatggctgccgacttcctaaagccggattatctgttc
ttggctgtgggcattgtgggcggagcctgcagtgatgtggaacagaagtttgtacaagtc
actaagttctccaaaagagagcagctgcttgatatcctcaaaaccacaggaacggagcgt
accatggtgtttgtggagaccaagagacaagcagacttcatcgctgtgttcttgtgccag
gagaaagttccaaccaccagcatccatggtgaccgagagcagagggaacgggagttggct
ctgacagatttccgctctggaaaatgtcctgttctggtggccacctctgtagctgcccgc
ggtctggacattccagatgttcagcatgtggtgaactttgacctcccaaaggacatcgac
gaatacgtccatcgtattgggagaactgggcgctgtgggaacgttgggagagccgtgtcg
ttctttgacccagaggttgacggggcgttggcccgctccctggtcacagttctgtccaag
gcgcagcaggaagtgccgccttggttagaggagtctgccttcagcagccatggcgccggc
tacaaccccaggaaaacatttggctccacggattccagaaagacgggctccttccaggag
aacagtgggccgagccaggctgctgcccaggctgcagctgatgacgaggaatgggagtga
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