Gambusia affinis (western mosquitofish): 122827327
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Entry
122827327 CDS
T07758
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
Organism
gaf
Gambusia affinis (western mosquitofish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
122827327
NCBI-ProteinID:
XP_043966068
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Position
LG24:111970..189093
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AA seq
1023 aa
AA seq
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MEDLDLKKDRAEPPGPTSPSMRSDRSKDEPPVFSNEPGPSDRKSSFGEEEPPSCCGLSQN
VLMDPVLTSCPQYGKQPRTGSGPLTANQSSCAPGQKMEDLDLKKDRAERPGPTSPSMRRD
RSKERPPYFSNEPGPSDRKSSFGEEEPPSCCGLSQNVLMDPVLTSCPQYGKQPRTGSGPL
TANQSSCAPDIVAQYQPDLKEFLKMKFQSLSEGVAEHGNKTVLNQIYTELHITEGLTREV
NQEHEVRQIETASRKQETIRREDIFNVPPGRDQPIRTVMTMGVAGIGKTLLTQKFTLDWA
EGKTNQNIDFIFPFTFRELNMLKEEKFSLLELIHKFFTKTKEISSFETFQVLFIFDGLDE
SRLDLNFNNNPFLTDVTESSSLDVLLTNIIRRKLFPSALLWITTRPAAANQIPAECVGMV
TEVRGFTDPQKEEYFRKRFRDDEEKANRIISHIQKSKSLHIMCHIPVFCWITAKVLENLM
ETREGGDLPKTLTEMYIEFLKVQLKIKEEKYDRGKKTKSIWSPENRKLIESLGRLAFDQL
LKGNLIFYDKDLNQCDINIKDAALFSGVFTEMFKTERGVNNISVYSFVHLSIQEFLAAVY
MLHCFTSRKSEVIQTFLGEKYNETSLDEFMEEVMEKSLKSRNGHLDLFVRFLHGLTVESN
QNLLEDLLGQRENSPETIQRIITNLKEMNTDRISPDRNINIFYCLMEMNDLSFYQEIQRL
LDSGKKLSDTDCSALAFMLQMSEVLDELDLEKYNTSESGRQRLVPAVRNCRKARLGGCSL
QKAECDVVASALKSNPDLTELEINKINIYEGGESDLKPLVEILESSVSKVKKLGLIGCSL
SETSWTSLFSALKSKPTHLTELDLSYTNLEGSVVKELCGFLQTEGCRLETLRLFGCRLSE
TSWTSLFSTLKSKPTHLTQLDLDNTNLEGSGLKDLCGFLQTEGCRLERLRLYFCRLSETS
WTSLFSALKSKPTHLTELYLNSTNLEGSGLKDLCGFLQTEGCRLEKLMYFNNIIIDISVN
NYL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggaagatctggatctgaaaaaggacagagcagaacctccaggacccaccagtccatct
atgaggagtgatcggtccaaagatgaacctccagtcttcagtaatgaacctggaccctca
gacagaaagagcagctttggtgaggaggagcctccatcctgctgtggtttgtctcagaat
gttctgatggatccggtcttgaccagctgcccccagtatgggaaacaacccagaacagga
tctggacctctgacagccaatcagagcagctgtgctccaggccagaagatggaagatctg
gatctgaaaaaggacagagcagaacgtccaggacccaccagtccatctatgaggagggat
cggtccaaagaacgtcctccatacttcagtaatgaacctggaccctcagacagaaagagc
agctttggtgaggaggagcctccatcctgctgtggtttgtctcagaatgttctgatggat
ccggtcttgaccagctgcccccagtatgggaaacaacccagaacaggatctggacctctg
acagccaatcagagcagctgtgctccagatattgttgctcagtatcagcctgaccttaaa
gagtttctgaagatgaagttccagagtctctctgaaggcgtcgctgaacatggaaataaa
accgttctgaaccagatctacacagagctccacatcacagaggggttaactagagaggtc
aaccaggaacatgaggtcagacagattgaaacagcatccaggaaacaagaaacaatcaga
agagaagacatctttaatgtcccacctggaagagatcaaccaatcagaacagtgatgacc
atgggagtggctggcattgggaaaacactgttaacacagaagttcactctggactgggct
gaaggcaaaaccaaccagaacattgatttcatatttccattcactttcagagagctgaat
atgttgaaagaagaaaagttcagtttattagaactgattcataaattcttcactaaaacc
aaagaaatcagcagctttgaaacgtttcaggttctgttcatctttgatggtctggatgaa
agtcgacttgatctgaatttcaacaacaatccgttcctgactgatgttacagagtccagc
tcactggatgttctgctgacaaacatcatcaggaggaaactgtttccttctgctctcctc
tggataaccacacgacctgcagcagccaatcagatccctgctgaatgtgttggcatggta
acagaggtcagagggttcactgacccccagaaggaggaatacttcaggaagagattcaga
gatgatgaagagaaggccaacaggatcatctcccacatccagaaatcaaaaagtctccac
atcatgtgtcacatcccagttttctgctggatcactgctaaagttctggagaatctgatg
gagaccagagagggaggagatctgcccaagaccctgactgagatgtacatagagttcctg
aaggttcaactgaaaatcaaggaggaaaagtatgatagaggaaaaaagacaaaatctatc
tggagtccagagaacaggaagctgattgagtctctaggaagactggcttttgatcagctg
ctgaagggaaacctgatcttctatgacaaagacctcaatcagtgtgacatcaacatcaaa
gatgctgcgttgttctcaggagttttcactgaaatgtttaaaacagagagaggagtgaac
aacatctccgtctactcctttgttcatctgagcatccaggagtttctggctgcagtctac
atgctccactgtttcaccagcaggaagtcagaggtgatccagacgttcctgggagaaaaa
tacaatgaaacatctctagatgagttcatggaggaagtcatggagaaatccctcaaaagt
agaaatggccacctggacctgtttgtccgcttccttcatggtctcactgtggagtccaac
cagaacctcttagaagatctgctgggtcagagagagaacagtccagaaaccatccagaga
atcatcaccaacctgaaggagatgaacactgatagaatctctcctgacagaaacatcaac
atcttctactgtctgatggagatgaacgatctctcattttatcaggagatccaacggctg
ctggattcagggaagaagctctcagatactgactgttcagctctggccttcatgctgcag
atgtcagaggttctggatgagttggacctggagaagtacaacacatcagaatcaggacga
cagagactggttccagctgtgaggaactgcagaaaggctcgacttggtggctgttcgctc
caaaaggctgaatgtgatgttgtggcctcagcgctgaagtccaacccagatctgactgaa
ctggaaataaataagatcaacatatatgaaggtggagaatctgatctgaagcctctggtt
gagatcctggagagttcagtcagtaaagtgaagaaactgggattgattggctgcagtttg
tcagagaccagctggacttctctgttctcagctctgaagtccaaaccgacccatctgaca
gaactggacctgagctacaccaacctggaaggttctgtagtgaaggagctctgtggtttt
ctacagactgaaggctgcagactggagacattgagattgtttggctgcaggttgtcagag
accagctggacttctctgttctcaactctgaagtccaaaccgacccatctgacacaactg
gacctggacaacaccaacctggaaggttctggactgaaggatctctgtggttttctacag
actgaaggctgcagactggagagattgagattgtatttctgcaggttgtcagagaccagc
tggacttctctgttctcggctctgaagtccaaaccgacccatctgacagaactgtacctg
aacagcaccaacctggaaggttctggactgaaggatctctgtggttttctacagactgaa
ggctgcagactggagaaattgatgtattttaataatataattattgatatttctgtgaat
aattatttataa
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