Gambusia affinis (western mosquitofish): 122827404 Help Entry 122827404         CDS       T07758                                  Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf04142   Lysosome Brite KEGG Orthology (KO) [BR:gaf00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     122827404  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gaf04131]     122827404 Membrane trafficking [BR:gaf04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     122827404  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     122827404    RAVE complex     122827404 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_DCAF12 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_WDR19_2nd Beta-prop_IP5PC_F Motif Other DBs NCBI-GeneID:  122827404 NCBI-ProteinID:  XP_043966246 LinkDB All DBs Position LG03:17880342..17942718 Genome browser AA seq 3092 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVVLGSNFEQLQIIPGAKHGNIQV GCVNCSQRSGQIAASYGSIVCVFEPVHLPDQKYTSSKLSCQWQKTGQFVLESMVRNLAWH PTGGTLLTGSSSLQLWSNADGTDESEEKGKQRKPTRPDSNSTWRCIWQSKTASPVSFIKF SPDGQFFATAGQDDCLVKVWYSTNKWKSCVAELFTPPDASVSVQGELTFSFIYLAHPRSV TGFSWRKTSTYLPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLISGYHSSHHFGPHGETV NSAGSSSKHACNGKSAGMSSQELSFQESWHSSSYRDIPQPSLTGCLPHDQNQHHNHRRSS NSGTPHPNALCHFHIAASINPATDIPLLPSISALSAVDDEEPGGLFTVHWLNNKELHFTL AMEVFLQQLGGSLEQRNESSNEVSELDDDENSDEEENRPSDPQGPEGGELPVAAVEHQVD ILLEEWNKGADMLFSIHPLDGSLLVWHVDWLDEYQPGMFRQTQVSFVSRIPVAFPTGDAI SLSHSVVMYACNKNVDLAIQHGRQRPPGSSLSQTKSALISYRNLGKAAPSSSLRLSIFTP NVLMISKHDDGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTT SHHNALRTPEADSILAPAEAYSTGVPSFSHGSRPSRVSLGGVSQDPNAIYSELILWRVDP VGPLSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGQSLRL YQAVIEAKKLLSELSNPDISKYVGEVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHV FEEDLILGSMKTEDTQDDPQSPSTACSKPTFSRDFFLVVVELTPTGRSLLHMWHLHLEAC PVTIEEATIQKEINAVSPMTGSQFIFDIPSSPVQKSKPCTSNLQSACRLSLTTHMLCSQE MALPQGVEVISVTPSAGHLSASCSLPSGRVPYLLATSCSDEKVRFWRCTALKTDPSSVHS VVYQWEEWSLLVEETHSNNSAVSVPGRPIKVSCCHSGRIAVAYRQSTNPPLNSTPHLDTH RPLPALASSPFCSNAHMTSTLTLQPCQSLALSPNPANMKEPAVHISTFQCESTGGSQWIL EQTIALESTDPTTFSSTSNGPVNIPDNTDFSTLNGNCPGSANRSQVHLDWVSQEDGSHVL TVGIGTKIYIYGRLSGKPPDLGLSSETNRDQSLSRLVLLRSVNLVSSVECSLPIPVSLSW VRDGILVVGMDCEMHVYSQWQPPVPPKPSVTVVQDADISSSVSSIVSAVRQCQEDVFTTG APTASLTLPKRSLTRSMMSLAQKLSGKKTVYDLPVEMEDSGLFEAAHQLSPTLPQYHPVQ LLELLDLGKVNRAKAILSHLVKCIAGEIVILKDNATHPEKRVRSRTISVGGSTARDQKIF NKSESSSPDYTEISSVPPLPLYALLAADEDAPHLEKGGSMSGDSGHGSSQTDAYDELFHT HNTLDLNPLDNEQEEPGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLM ALADTIATTSTDLKDNQDNSKGGETLDECGLRFLLAVRLHTFLLTSLPPVHRAQLLRQGL STCHYAWAFHSEAEEELLNMLPALQKGEPTWADLRAMGVGWWLRSTNKLRRCIEKVAKAS FQRNNDPLDAAIFYLAMKKKAVVWGLYRSQKNTKMTEFFHNNFSEDRWRKAALKNAFSLL GKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSSTYKKILQRHV LGQDKQIPVHPDPFLRSIAFWVLEDYSKALDTLIEQPANCKSSGPSQSKSNSVSSTMSAS NPEVFNFYIYLRTHPLLLRRHFSSSDKAKVALTTEVRRADSISLDERRLFFTTAYAHLHT GCPMLALEVLSKMPKVHKHSKVSHHGAKDIPHDLSVGSRNGPASEPDWSPPGMNGYQSDG NSNSRSDSVLSFDWSQPSMALPDEHLELKWDSDKDEEDEDEENVPENNVKTDNSVFQDRQ DSMLTIAETLKSEESEDGDDFIAPSEDIFLAHLKFTACLKIMSNELRTLSTGYELDGGKL RYQLCQWLEREVVAHQHVCSYKPSLPERSVSGDGPVSGLVEEEQPGSPRNDVHKSRRLWL QSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSLKSVVAVNAQPTSIPLL TACTVNVKTVVANPIVYLTNLTHDILHTINALDSPPHPDVVNNEIYVMHTLAASLSACIY QCLCDGHKYSHVNHFTGTVYQSVLLSQKQAVKTVSLGEAVQPNTSPAQWPGISSLIRLLS SAGEETQPGLAVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNCKLWMTVFGGGAR VPVMDKASSPARTPPPTSPSGLDRKPRRFRVLSSRSGSREESGIDREEPPSPKVVVEQEA TSIFKEHFVPPDLSIWDYFIAKPELPPSQDRVEYDSEESQESQDEDDEDFESEDVFEPNL PQKEHSNHNSYSWCLMRLAMVQLVLVNLKSFYPVAGYDLLDLPVASPLCHAVLKTLQRWE QVLQKRLELFGGPPAKYISTHPHDEIPTPGPALLRHKALFEPSNTPFRNNHHSVLPVKRL WQYLVKQEEVQETFIRNIFTKKPGTNQSVEDHTDSMKYSGVEEAGNSQTESDLGCPGGKA RIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDEDEVESKGVGG DDFLVVHARDDFGSLHGTTPYTHSSPGTPISVPWLGGHQTGRGAAVMIKRNINNVRRMTS HPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGGLS LWQTNTSGSTLKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPANS LVHAFCCHDSGATVLSMAQRRQLLLTGGRKGWITILELPHRQQQQSFQAHDSPVKALAVD PTEDCFISGSAEGNIKVWSLATQGLLYHFPNEHARQSLFRNLGTGVMQIEVGPASHIFSC GADGTMKMRTLPNRFAAAQSSSTPKSDVKFFI NT seq 9279 nt NT seq  +upstreamnt  +downstreamnt atgaatctccatcaagtccttacgggggccgttaaccccggggacaattgcttctctgtt gggagtgtcaacaatgtgcctttcacggcttatgcgtcaggttgtgacgtggtggtttta ggaagtaattttgagcagctgcagatcatcccgggggccaaacatgggaatatccaggtc ggttgtgtcaactgctcacaacgaagtggacagattgcagcttcctatggaagcattgtt tgtgtctttgagccagttcacctcccagatcaaaagtacacatcatctaaactaagctgc caatggcagaagactggtcagtttgttttagagtcaatggtacgaaacctggcttggcat cccacaggtggtactctgttaactggctctagtagccttcagttgtggtccaatgctgat gggacagatgaaagtgaagaaaagggaaagcagagaaaacccaccagaccagactctaat tctacctggagatgcatctggcagagcaagactgcctctccagtcagttttataaagttc tcacctgatggacagttctttgctactgcaggacaggatgactgtctagtgaaggtttgg tacagcacaaacaagtggaagtcatgtgttgcggagctgtttactcctccagacgccagt gtgagtgtgcagggagagctgaccttttctttcatctacttggctcatcctcgctccgtt acggggttctcctggaggaagactagcacgtacttgccacgaggggcagtgtgtaatgtt ctgctcacctgctgtaaggacagcgtctgccggctgtgggcagagacgctgttgccaggt gacagcctcatctccggttaccatagcagccatcattttggcccacacggggaaacggtc aactctgctggctcctcttcgaaacacgcctgcaatggaaaatcagcaggaatgtcttca caagaattaagttttcaggaatcatggcattcctcgtcttaccgggatattcctcagccg tctctgactggctgcctgcctcatgatcagaaccaacatcataaccacaggaggagcagc aacagcggaacacctcaccccaacgcgctctgccacttccatatcgcagccagtattaac ccagccacagacattcctctgctgccttccatctctgctctgagtgcggtggacgacgag gaacccggcggcctgtttaccgtccactggctcaacaacaaagagcttcacttcacttta gccatggaagtcttcctgcagcaacttggaggaagtttggaacagaggaacgaatcctct aatgaagtttcagagcttgatgatgacgaaaactcagacgaagaagagaacagaccaagt gaccctcaaggccctgaaggtggggagcttcctgtagcagctgtggagcatcaggtggac attttgttagaggagtggaataaaggggccgacatgctgttcagtattcacccgctggac ggctctttgttggtctggcatgtcgactggttagatgaataccagccaggcatgttcagg caaactcaggtgtcgtttgtgtcccgcatcccagttgcgttccctacaggcgatgcaatc tccctcagccacagtgtggtcatgtatgcctgcaacaagaatgtggatctggctattcaa catggcagacagcggccccccgggagctccttgtctcaaaccaagtctgctctgataagc tacaggaatcttgggaaagctgctcccagcagcagcctcagactgagtattttcacccct aacgtcctcatgatctccaaacacgacgacggctctctgaatcagtgggcagtcagtttt gcagaggattctgctttctccactgtgctcagcgtctctcacaaatcacgctactgtggt caccgtttccacctcaatgacttggcctgtcactcgctgcttcctctcctcctcaccacc tcacaccacaacgccttgaggacgccagaggcagacagcatcttggctcctgcggaggct tactcgactggtgtcccgtctttctctcatgggtcacgaccctcccgtgtttccctcgga ggggtttcccaagatcccaatgccatctacagcgagctgattctgtggagagtggacccg gtcgggccgctgtctctatcaggcggggtctcagagctggccaggatcaattccctccat gcgtcagcgtttgctaatgtagcctggcttcccacactcattcccagcagctgcttaggt gtgtactgtaactcccccagtgcttgctttgtggcgagtgatggtcagtcactcaggcta tatcaggctgttattgaggcgaagaaactcctgagtgaactctccaaccctgacatttct aaatatgttggggaggtgtttaacatcatcagccagcagtcaacagcaaaaccaggctgc atcattgagctggatgccattacagactttcagggaaaggagacccagctcctgcacgtc tttgaggaggatctgatccttggcagtatgaaaacagaagacacacaagatgatccccag tctccttctactgcctgcagtaagccaaccttctcacgagatttttttctggtggtggtg gaactgactcctactggtcggtctttgctccacatgtggcatctgcatctggaagcttgt cctgtcacaatagaagaagctacaattcaaaaagaaatcaatgccgtttctccgatgacc ggctctcagttcatcttcgacatccccagctctccggtacagaagagtaaaccctgcact tccaatttacagagcgcctgtcgtctcagcctgacaacgcacatgctgtgcagccaagaa atggctctaccgcaaggggtggaagtcattagcgttactccttcagcaggtcatctgagt gcatcatgttctctgccgtcgggtcgtgtgccttatctccttgctacttcctgttctgat gaaaaggtgcgcttctggaggtgtactgctttgaaaacggacccgtccagtgtacacagc gtggtgtatcagtgggaagagtggtccctgctggtggaggagactcattcgaacaacagc gccgtgagcgtgcctggtcggcccatcaaggtcagctgctgtcactctggacggattgct gtcgcctataggcagtcgacaaacccaccactgaactcaacacctcatctggacactcac agaccgctgcctgccctggcatcctcccccttctgcagcaacgctcacatgacctcgacc cttactctacagccttgtcaaagtctcgcgttaagccccaacccagccaacatgaaggaa ccagcagtccatatcagcacctttcagtgtgaatccactggcggttcacagtggatactg gagcaaactatagccctggaaagcacagatcccacaactttttcttccaccagcaatgga cctgtcaatattccagataacacagacttctctacactaaacggaaactgtcctggttct gctaatagaagccaggttcacttggactgggtttcccaagaggatgggtcacacgtattg actgttggaattgggacaaagatttatatttatggccgtctctctgggaagcctccagac ttaggcctgtcttctgaaacaaatagagaccaaagtctgtctcgtctggttctcctgcgg tctgttaatctggtttcctctgttgaatgttcgttacctatcccagtctctctgtcctgg gttcgagatgggatcttggtggtgggcatggactgtgagatgcatgtttattcccagtgg caaccaccagttccccccaaacccagcgttacggttgtccaagatgcagatatcagcagc agcgtctcctctatagtctcagctgtcagacagtgtcaagaggacgttttcaccactggt gctcccacagcttctttgaccctacccaaacgatccctaacaagatcaatgatgagcctg gcgcagaaacttagtgggaagaaaaccgtttatgaccttcctgtagagatggaagactcc ggactctttgaagcagctcaccaactttctcctactctgcctcaataccatcctgttcag ttactggagcttttggatctggggaaggttaaccgtgccaaagcaatcctgtctcacttg gtaaaatgcattgctggggaaattgtgatacttaaggacaatgccacccatccagagaaa cgcgtgcgttctcggacaatcagtgtgggaggcagcaccgccagggaccaaaagatattt aacaagtcagaaagctccagccctgactacactgagataagctctgtccctcccctgcct ctgtacgctctgctggcagctgatgaggatgcaccacatcttgagaaaggaggcagtatg agcggtgatagcggacatggctccagtcagactgatgcctatgatgagctttttcataca cacaacactctagatctcaatcctctggacaacgaacaggaagaacctgggaataaggtt atagatctttcccagtacagtcctacatactttggcccagagcatgctcaggttctgtcc agccacctcctccactccagtttgcccggattaacccgaatggagcagatgtccctcatg gcgctggccgacaccatcgccacgacaagcacagatctcaaggataaccaggataacagc aaaggtggagaaacactggatgagtgtgggttgaggttcttgctggctgtcagactccat accttccttctaacatccctgcctcctgtccatcgagcccagctgctgcggcaaggcctt tcaacgtgtcattatgcctgggccttccactctgaagctgaggaggagctcttgaacatg ctgcccgccctgcagaagggagagcccacctgggctgacctccgagctatgggtgtgggc tggtggctgcgcagcaccaataagctgcgcagatgtatagagaaggttgctaaggcttcg tttcagagaaacaatgatcctctggatgctgctatattttaccttgcaatgaaaaagaag gcagtggtttggggactgtacaggtcacagaagaatacaaaaatgacagagtttttccac aacaacttcagcgaggacaggtggaggaaagctgcattgaagaacgccttctctctgttg ggaaagcagcggttccagcattctgccgccttctttctgctggctggttcccttaaggat gctgtggaggtgtgtttagagaaaatgcaggacttgcagctggccttggtgatctctaga ttgtatgaatctgagtttgagacatcttctacttataaaaagatcctccagagacatgtt ttgggtcaagacaaacagattccagtccatccagatccgttcctgcgaagcatagctttc tgggtcctggaagattacagcaaagcattagacacactgattgagcagcctgcaaactgc aaaagctctggaccctctcagagcaaatctaacagtgtttcttcaaccatgtctgcaagt aaccctgaggttttcaacttttacatctacctccgcacacatccgctgctccttcgccgc catttcagctcttcagacaaagctaaagttgctctgaccacagaagtccgcagggccgac tccatcagcctggatgagaggagactcttcttcacgactgcatacgcacacctccacacc ggatgccccatgttagcactggaagtcctttccaaaatgcccaaagttcacaagcactcc aaagtttcccatcacggagcaaaagacattcctcatgacctgagcgttgggagcaggaat gggccggcatcggaacccgactggtctccgccgggcatgaacggctaccagtcggatgga aacagcaacagcaggtctgattcagtgttgagttttgattggagccagccgtcgatggcg ctaccagatgagcacctggagctgaagtgggacagcgacaaagatgaagaggacgaagac gaagagaacgttccggaaaacaatgtaaaaacagacaacagtgtgtttcaggaccgacag gactccatgttgactattgcagaaacgttaaaaagcgaggaaagtgaagacggcgacgac ttcattgctccatctgaagacatctttttggcccatcttaagttcaccgcttgcttgaag atcatgagcaacgagcttcggactctgtcgacgggatacgaactggatggagggaagctg cggtaccagctctgtcagtggttggagagagaggttgtggctcaccagcatgtttgcagc tataaaccttccttaccagaacggtccgtctcgggtgatggccccgtttctggcctggtg gaggaggaacagcctggcagcccccgcaatgacgtgcataagagcaggaggctctggctt cagagcaaccagccgttactgaggatgtttctgagctactgcagcttgcatggctcccat ggtggaggactggcttctgtacgcatggagctcatattactgcttcaagagtctcatcag gatgactccctgaagtctgtggtggcagtgaatgcccagcctacctctatcccgctgctc acggcctgtacggtcaatgtaaagacagtggtggccaaccccatcgtctatctgaccaat ctgacccacgacatcctgcataccatcaatgcactcgactctcctccacatccggatgtc gttaacaacgagatctatgtgatgcatacattggctgcttccttgtctgcatgtatctat caatgtctttgtgacggacacaaatacagccatgtgaaccatttcaccgggactgtgtat cagagtgttttactgtctcagaagcaggcagtgaaaacagtcagcttgggtgaggctgtt cagccaaacacttctcctgctcagtggcctggtatctcctctcttattcgcctgttgagc tctgcaggtgaggagacccagccgggcctcgctgtgctgctctgtgagatcctgacagca gtcttcctgagtctgtttgttcacggcatggccacacactccagcaacgagctgtttcgc atcgtggctcacccactcaactgcaagctttggatgactgtgtttggaggaggcgcccgt gtccctgtcatggataaagccagcagtccagcaagaactccgcctccaacctccccaagt gggttggaccggaaaccacgacgattcagggttctgtcatcccgcagtggatccagggaa gagtctggaatcgaccgtgaagaacctcccagtcctaaggtcgtagtggaacaggaagcg acctccatttttaaagagcattttgttcctccagatctcagtatttgggattatttcatt gccaagcctgagctgccaccgtcacaagacagagttgagtacgactcagaggagagccag gaaagccaggatgaagatgatgaagattttgaatctgaagatgtgtttgaacccaacctg ccacagaaagagcattcaaaccataattcatacagctggtgtttgatgcgcctagccatg gtacaactggtgttggtcaacctcaagtctttttacccggtggcaggatatgatctgtta gatttgcctgtggcctcgcctctgtgtcacgctgtgctgaagacgctgcagcgatgggag caggtgctgcaaaagcggctggagctgttcggcggccctccagccaagtacatctccact cacccccacgatgagatcccaactcctggccccgccttgctcaggcacaaagccctgttt gagccatccaacacccccttcagaaacaaccaccactcagtactgccggtgaagcgttta tggcagtacttggtgaaacaggaagaggtgcaggagaccttcattaggaacatcttcacc aagaaaccaggcacaaatcagtcggttgaggaccacactgacagtatgaaatattcagga gtggaggaggcaggcaacagtcagactgagtcagatctgggctgccctggaggcaaagca cgcatcatccacaaggaatctgacatcattacagcctttgccatcaacaaggcaaaccgt aattgtttagtcatggcctccacacatgacattcaggagctggatgtgtcatccatcttg gccacgcagatcttgacttggattgatgaagatgaagtcgaatcaaaaggtgttggtggt gatgacttcctggtggtccatgcacgtgatgactttggttcgcttcacggcaccactcca tacacccacagcagccccggcacacccatcagtgtgccgtggcttggaggccaccagacc ggcagaggtgcagctgtgatgataaagagaaatataaacaacgtgagaagaatgacctct catcccacactgccgtactacctgacaggagctcaagacggaagcgtgaggatgttcgag tggggtcactctcagcagatcatctgcttcagaagtccaggcaactccagagtcaccagg atccgattcaaccaccaagggaacaagtttggtattgtagatgcagatggaggattaagt ctctggcaaaccaacaccagtgggagcacactcaaaccgtacctgacgttgcagtgccac aacaaaaccgctcatgactttgtttttgttggctcttcttccctcattgccacagcaggg ctttcaacagacaacaggaatgtttgtctctgggacacactcgtcactcctgcaaacagc ctggttcatgctttctgctgccatgattccggcgccaccgtgctttcgatggcgcagcgg cggcagcttctcctcaccggcgggaggaaaggttggatcaccatcttggagcttccacac cgacagcagcagcagagtttccaggcccacgactcgccggttaaagcgctggctgtcgat cccactgaggactgcttcatcagcggatccgctgagggaaacattaaggtgtggagtctg gccacgcagggcctcctctaccacttccccaatgaacacgcccgccagtcgctgttcagg aacctggggaccggggtcatgcagatcgaggtgggaccggccagccacatcttctcctgc ggcgccgacgggaccatgaagatgaggacgctccccaaccgcttcgccgcggcgcaaagc agcagcacccccaagagcgacgtcaagttcttcatctag

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