Gambusia affinis (western mosquitofish): 122827416
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Entry
122827416 CDS
T07758
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122827416
Peptidases and inhibitors [BR:
gaf01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
122827416
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
122827416
NCBI-ProteinID:
XP_043966275
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Position
LG24:13406984..13446523
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AA seq
1230 aa
AA seq
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MKRFSFCLPGCFSWLTGELKEWSNIGSPLRKVMVPSLHWLLLLWRLQAVWAQDYEEYEDE
VVTTRRQNKLFTPNSIPQNGKASIDEDCSLELAFLVDSSESAKDNHEQEKRFVSDVMDRL
QGLRLDSGRGLSSRAALLQYSSQVKIEQTFRDWRGIENFKARVAPIQYIGHGTYTTYAIT
NLTRIYLEESNTKSIKVAVLLFDGISHPRNPNIFDAVDDARNQGVRFFTIGITPEANEAT
NIAQLRRIASSPATRYLHNLQDVGIVDKVIKEITVLVEEGCPLELNPCKCEKGERGPSGP
AGKKGRPGDDGSPGAKGQKGESGLSGLPGREGAEGKPGYKGEKGERGECGTPGVKGDRGP
EGVIGPRGNRGVQGLPGQPGDVGPEGIMGKKGERGLPGPPGIQGETGIGLPGPKGDVGFQ
GQPGPPGPTGIGEPGPPGPQGPQGVQGERGPTGEGIPGPKGERGIEGPRGPRGQPGLGIK
GDKGDFGPPGFPGPLGLPGLGIQGEKGTEGPRGPPGIRGPPGEGFSGPKGDQGLPGEVGA
PGERGAGEPGAKGEPGSPGLSGLPGLPGEDGAPGQKGEPGAVGLRGPEGAPGIGTQGEKG
DQGQRGIRGLTGPPGIAGPSGPKGEPGSQGRPGSAGPPGRFITGPKGDPGPGGAPGPIGE
TGFGLPGPKGDRGDPGPAGPFGPKGDGYPGPMGPPGLPGLPGEPGPEGMGIPGPKGDVGF
RGPPGLPGPPGEGVQGPPGNPGRPGPPGPTGPQGLGLQGPKGEQGAQGVTGPRGVPGEGF
PGAKGDRGSSGERGLKGFKGEMGDSGIPGQPGLPGIKGEAGLTREDIIRMIKEICGCGIK
CKERPMELVFVIDSSESVGPDNFEIIKRFVTTLVDRVTVGRNATRIGLILYSLEVKLVFN
LARYNTKEDIKEAIRNIPYMGEGTYTGTAIRKATQEAFYSSRLGVSKVAIVITDGQTDKR
EPVKLDIAVREAHAANIEMFALGIVNTSDPTQADFLRELNLIASDPDSEHMFLIDDFNTL
PALESKLVSQFCEDENGALIYNRITNGYSGNNGNRITGSYAAGGYGYKPITQQDHLGGQQ
AGVGTHSHGSKGSSSVHGGGGQRVTTVITTSGSERGDTFNRGTSDYKTPPPARGGSSSSS
SSSTNISTSSSGVPVAPRPALPKETVPLDPRCGLVLDQGACREYNIRWYYDKQANACAQF
WYGGCGGNRNRFDTEEECKRTCVVSRVTGG
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggttctccttttgtcttcctggatgcttttcatggctgacaggagagcttaaa
gagtggagcaacattggaagccctttgagaaaagtcatggttccctctctgcactggctg
ctcctgctgtggagacttcaggctgtgtgggctcaagactatgaagaatatgaagatgag
gttgtgaccacaaggaggcaaaacaaactcttcacaccaaattccataccacagaatggc
aaagcttctattgatgaagactgcagtttggagttggccttcctggtcgacagctcagag
agcgccaaggacaaccacgaacaggagaaacgcttcgtttccgacgtaatggaccgactg
cagggcctccggctggacagtggccgcggactcagctcccgtgcggccctccttcagtac
agcagccaggtcaagatagagcagaccttcagagactggaggggcattgaaaacttcaaa
gccagagtcgctcccattcagtacataggccacggcacctacaccacctacgccatcacc
aacctgacacgcatttacttggaggagtcaaacaccaaaagcatcaaggtggccgtcctg
ctcttcgacggcatctcacacccaaggaacccaaacatatttgacgctgtggacgatgcg
aggaaccaaggcgttcggttcttcacaataggaatcacacccgaagccaacgaagcaacc
aacattgcacagctgcgccgcatcgctagttccccagctacccgctaccttcacaacctg
caagatgttggcattgtggacaaggtcatcaaggagattactgtgctggtagaagaaggt
tgtccgctcgaattgaacccgtgcaaatgtgagaaaggtgagagaggacccagtggccct
gcgggcaagaaaggacgtcccggagatgatggaagccccggcgcgaagggacagaagggt
gaaagtggtctcagtggacttccaggtcgcgaaggagccgagggtaaaccaggatacaaa
ggagagaagggagagagaggagagtgtggtacaccaggcgttaaaggagacagaggccct
gaaggtgttattggtccaagaggaaaccgtggagtccagggtttgccaggtcaaccaggt
gatgtgggacctgaaggaatcatgggaaaaaaaggggagcgggggcttcctggaccacct
ggaatccaaggtgagactgggatcggccttccgggaccaaagggggatgtcggtttccag
gggcaaccggggcctcccggccctacggggatcggcgagcccggaccaccgggtcctcag
gggccacagggagtccaaggagagagaggaccgacaggagaaggtatccctggccctaag
ggcgagcgaggcatagaggggccacgggggcccagaggacagccgggcctaggaatcaaa
ggagacaagggggattttggccctccagggtttccagggcccctgggccttccaggtcta
ggcatccaaggagaaaagggaacagagggcccccgggggccacctggaataagaggccca
ccgggagagggcttttctggacctaagggagaccaagggctgccaggagaagtgggggct
ccaggagaaagaggagctggtgagcccggtgccaagggtgaaccaggatcaccaggactg
tcaggtttgcctggacttcctggagaggacggagctccaggacaaaagggtgaaccagga
gccgttggtcttagaggtccagaaggcgcgcctgggattggcactcagggagaaaagggt
gaccaaggccaaagaggaataagagggttgacaggtccgcctggcattgctggaccctca
ggaccaaagggagaaccagggtcacagggacggcccggttccgctggaccaccgggacgt
ttcatcaccggacccaagggcgatcctggaccaggtggagctcctggtccaatcggcgag
actggctttggactgcctggcccaaagggcgatcgaggcgacccgggacccgcaggtccg
tttggccccaaaggagacggctacccaggccccatggggcctcctggtctgccggggctt
cctggagaacctggaccagagggcatgggcatcccaggacccaagggggacgttggattc
cgagggccgccaggtttacccgggcccccaggggaaggcgtccagggacctccgggtaac
cccgggcgaccaggtccacctggcccaacagggccacaggggctaggacttcaaggcccc
aagggcgaacagggggcccagggtgtgaccggacccagaggtgtacctggagagggcttt
ccaggagccaaaggtgaccggggctcgtctggagagagggggcttaaaggattcaaggga
gaaatgggagattcgggaatcccggggcaacctggacttccgggcataaaaggggaagca
ggcctcactagagaggacatcattcgaatgatcaaagagatctgtggatgtgggatcaag
tgcaaggagaggcccatggagttggtgtttgtcattgacagctcagagagcgtggggccc
gataactttgagatcatcaagcgtttcgtgaccactctagtggatcgggtcacggtaggc
cgcaacgccacgaggatcggtttgatattgtacagcttggaggtgaaattggtgttcaac
ttggcccgctacaacaccaaagaggacatcaaggaggccattaggaacatcccgtatatg
ggcgagggcacctataccgggacagccatccggaaagccacacaggaggccttctatagc
tcccgcctcggcgtcagcaaggtggccattgtgattaccgacgggcagacggacaaacgg
gagccggtcaagctggatatagccgtgcgggaagctcacgccgccaacatcgagatgttc
gccctggggattgtgaacacgtcggatccaacgcaggccgacttcctgagagagctcaac
ctgatcgcgtcggacccggacagcgagcacatgttcctgatcgatgacttcaacactttg
ccagctctcgagtccaagctggtcagccagttctgcgaggacgaaaacggagccctgata
tacaaccggataacaaacggctacagcggaaacaacggcaacaggatcactgggagctac
gccgccggtggctatggttacaagcccataactcaacaggaccatcttggcggccagcag
gctggtgttggcacccacagccacggcagtaaaggatccagctctgttcatggtggagga
gggcagcgcgtaaccacagtgataaccacctcaggaagtgaacgcggggacacgtttaac
cgcggcacctccgactacaaaactccgcctcccgccagagggggctcatcttcctcatct
tcgtcttctacaaacataagcacatcatcctcaggtgttcctgtggcgccgaggccagct
ctgcccaaagagaccgtacccctggaccctcgctgcgggctggttctggaccagggagcg
tgtcgagaatataacatccgctggtactacgacaagcaggccaacgcttgcgcccagttc
tggtacggaggctgcggcggcaacaggaaccgcttcgacaccgaggaggagtgtaagaga
acatgtgtggtctccagagtcacaggaggctga
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