Gambusia affinis (western mosquitofish): 122827472
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Entry
122827472 CDS
T07758
Symbol
zswim2
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2 isoform X1
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122827472 (zswim2)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122827472 (zswim2)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122827472 (zswim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
SWIM
zf-C3HC4
zf-rbx1
zf-RING_5
ZZ
Motif
Other DBs
NCBI-GeneID:
122827472
NCBI-ProteinID:
XP_043966410
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Position
LG24:complement(11968844..12020526)
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AA seq
534 aa
AA seq
DB search
MRHVYRRVSNRRQVHGGRRTKERDARPDHRGRRMAKRAAWRNVPSETVSSHQDRALDSTV
FLLRSFGPTAFLLREDGETADLKVCLGERHTCTCPTFAREREPCKHICWLLLRKFQLPRE
HQYAFQSGLSDRQLLEVLQGSHLPKASAVGSPRRTLLERETGAVCRKDVRNLDVCPICLE
GLLRKKLPVCYCRYGCGNSVHISCMKVWADSQGLSDGREMLRCPLCRESFGSLQLLREQA
KNAARLFVAAEKERADRHLGVVCCGCGVEPIAGTCYRCDLCGSLYLCETCVKKGNHSRHP
LASRTTRKEEWTPAPAGSPPDPEPGDGRCVRPGFASRGGDVAGECRRLLLGAPAEPPADV
VFRRVPVAEVRRGSRLLDEGMQCRICLLEFREGQRLRTLPCRHQFHVRCVDRILLRSRSC
PLDGYVVCCRRPTDGNGSSEDASVRRREDRLKDLFVPGIALLAQSARPSPACGATDSDTS
IDASPFGGPRKKSKGNVAAGKAKLRLKDAGEDAFGDSAGDGLELRMTGFSITKE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacgtttaccgacgcgtttctaatcggcggcaggtgcacggcggcagaaggacg
aaggaaagagacgcgaggccagatcaccgaggcagaaggatggccaagcgagccgcttgg
aggaacgttcccagcgaaacggtgagctcccatcaggaccgagccctcgactccaccgtc
ttcctgctgcgctccttcggcccgactgccttcttgctcagggaggacggagagacggcc
gacttgaaggtgtgcttgggtgagcgccatacgtgcacctgtccgacgttcgccagggag
cgggaaccgtgcaaacacatctgctggcttttactgaggaaattccaactacccagagag
caccagtatgcgtttcagtcggggctgtcggaccgccagctgcttgaggttctccaaggt
tcgcacctgcccaaagcctctgctgtcgggagcccccgccggactcttctggaacgtgag
accggagccgtctgtcggaaagacgttcggaacctggacgtgtgtcccatctgtctggag
gggctgctgcggaaaaaactgcccgtgtgttactgcaggtacggctgcggtaacagcgtc
cacatctcctgcatgaaggtgtgggccgacagccagggcctgtcggacggccgggagatg
ctgcggtgccccctgtgcagggagagctttggctccctgcagctgctccgggagcaggcg
aagaacgcggcacggctcttcgtggccgccgagaaggagagagcggaccgacacctggga
gtggtctgctgcggctgtggagtggaaccgatcgccgggacctgctacagatgcgacctc
tgcggctctctgtatctctgtgagacctgcgtaaagaaaggaaaccactcgcggcatcct
ctcgcttcgagaacgacgagaaaagaagagtggactccggcgcccgcgggctcccccccg
gatccggagccgggggacggaaggtgcgttcggccaggatttgcgtcccgtggtggtgac
gtggccggcgaatgtcgccgtcttctcctcggcgctccggcggagcctcccgccgacgtc
gtgttccggcgtgtccccgtggccgaggtgaggcgcggctctcggctgctggacgagggg
atgcagtgtcggatctgcctgctggaattccgtgagggtcagcggctccggacgctgccc
tgtcgacaccagtttcacgtgcgctgcgtggaccggatcctcctgaggtcccgctcctgt
cccctggacggatacgtcgtctgctgtcggagaccgacggacgggaacggctcttccgag
gacgcctccgtccggcggagggaggaccgcctgaaagacctgtttgtccctggaatagcg
ctgctcgctcaaagtgcccgaccctctcccgcttgtggagctaccgactcggatacatcg
atagatgcctccccttttggtggtccccgcaaaaagagcaaaggcaacgtggccgccggg
aaagccaaactgcgtctgaaagacgcgggcgaggacgcgttcggagactctgcgggagac
ggcttggagctgagaatgaccggattttctataaccaaagaataa
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