Gambusia affinis (western mosquitofish): 122827675
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Entry
122827675 CDS
T07758
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00310
Lysine degradation
gaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122827675 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122827675 (smyd1b)
Enzymes [BR:
gaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
122827675 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
122827675 (smyd1b)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122827675 (smyd1b)
BRITE hierarchy
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GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
122827675
NCBI-ProteinID:
XP_043966509
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Position
LG03:complement(18355579..18364705)
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AA seq
489 aa
AA seq
DB search
MENVAIFDSPGKGRGLKAAKEFWAGDVIFSEASLAAVVFDSHADRICHSCFRRQEKLQRC
GQCKFAHYCDRTCQRAGWAEHKQECGAIKAYGKVPNENIRLVSRIMWRIDKEGSLVSDLQ
LTTLDELEDHLNDMQEDDLKELKVDIHNFLDYWPRTSKQHTIDDISHIFGVINCNGFTLS
DQRGLQAVGVGLFPNLCLVNHDCWPNCTVILNHGSQSAVNTIFHSQRRIELRSLGKIAEG
EELTVAYVDYLNVSEERRRLLKTQYFFDCTCEHCSNKTHDDIKMGGREVEGVKPSDEQVK
EATDYCFDMMQKMDKARLNGDYHEVVKICRQCIEKTEPVLAETHIYQLRMWSTMSEVQAY
LQYFEEAADYARKMVEGYIKLYQPNNAALGMAAMRAGVTHWQAGLIEVGHGMICKAYAIL
MVTHGPTHPITKDLEAMRMQTEMELRMFKQNEYVYHSMREAALKNKPMAMLHEPKSVEEG
IKNLFHRRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggccatattcgactctcctgggaaaggaaggggcttgaaggccgccaag
gagttttgggctggagatgtaattttctctgaggccagtctcgcagctgttgtgtttgac
agccatgcagaccgcatttgccacagctgtttccgcagacaagaaaagctccagaggtgt
ggtcaatgcaaatttgctcattactgcgaccgaacctgccaacgtgctggctgggctgaa
cacaaacaagagtgcggtgccatcaaagcgtacggaaaagtaccaaacgagaacatccga
ctggtgagccgcatcatgtggcgcatcgataaggaaggaagcttggtgtctgacttgcag
ctgaccaccctggatgagctggaggaccacctaaacgacatgcaggaggacgatttaaag
gagctcaaagtggacatacacaacttcctggactactggccccgaaccagcaagcagcac
acaatcgatgacatctcacacatatttggagtgatcaactgtaacggcttcactttgagc
gaccagaggggtcttcaggcggtaggagttggtctttttcctaatttgtgcttggttaac
catgactgttggccaaactgcactgtgatcctcaaccacggcagtcagtcggctgtgaat
accatatttcattctcaacggaggattgagttgcgctccttgggcaagattgcagaagga
gaggagctgacagtcgcttatgtggactacttgaatgtgtcagaagagagacggaggctc
ctgaaaacacagtacttctttgactgcacatgtgaacactgcagcaacaaaacccacgat
gacataaagatggggggacgggaagtggaaggagtcaagccttcagatgaacaggtgaag
gaggcgacagattattgctttgatatgatgcaaaagatggacaaggctcgattaaacggc
gactaccacgaggtggtgaaaatatgcaggcagtgcattgagaagacagagccagtcttg
gctgaaactcacatctaccagctgaggatgtggagcacaatgagtgaggtgcaagcttac
ctgcagtattttgaggaagcggctgattacgctcgcaagatggtagagggatacataaag
ctgtaccaaccaaacaacgctgccctcggtatggctgccatgcgtgctggagtgactcac
tggcaggccggactcatcgaggtcggacacgggatgatctgcaaggcctacgccatcctt
atggtcacccacggcccaacacaccccatcaccaaagacctggaggcgatgcgcatgcag
acagagatggagctgaggatgttcaagcagaacgagtatgtttatcacagcatgagagaa
gcggccctgaaaaacaaacccatggccatgctgcacgaacccaagtctgttgaggagggg
atcaagaatctcttccaccggaggaagtag
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