Gambusia affinis (western mosquitofish): 122827864
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Entry
122827864 CDS
T07758
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gaf03037
]
122827864
Cilium and associated proteins [BR:
gaf03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
122827864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_17
TPR_11
TPR_14
TPR_9
TPR_19
TPR_NPHP3
TPR_6
PUB
HlyE
AP4E_app_platf
DUF4698
Motif
Other DBs
NCBI-GeneID:
122827864
NCBI-ProteinID:
XP_043966876
LinkDB
All DBs
Position
LG03:complement(14246318..14480542)
Genome browser
AA seq
2490 aa
AA seq
DB search
MFFVGTFSSQVNWSLFLFLQFSVFGSRTAGRPIRCVAVDDGSRCALSKAEFMEKVRQSNE
ACQRGDFQEAVRLYGDALQADPQNCILYSNRSAAFLKLGQHQAALEDAEKACVLNPKWPK
AYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRDSLEPTYQQLQ
KMKLDKSPFVVVSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSL
GNTEKSLGYMQQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKL
KDREAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAM
GDFDNAVQCHEQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQEL
EEKSIEMRAYAGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMK
GDYETALKLHKTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEV
NDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSR
GEFPQAVPYYEQYLRLSPELQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDL
HDKLSQAKAYCNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCK
KDVTGAIQFYEQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQEL
GDVSGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNV
GVMEEAIGYLEQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVA
QSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECSGKAQAYGELGALH
SQLGNYEQAISCLERQLAIARDTQDRLLEGDASCGLGAVYQAMGEYETALRCHQSDLEIA
EEAASTTRQARAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTH
HALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALF
ETIRHEAQHSTDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVER
QTGQQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGE
GVSEGGSDFQDGGGGGGMVSSSSLEQHIASAREALGVESYYSRGCSSSETESEAGDFLDQ
QFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNL
GKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYE
RFSLIAVPSIHGLGFSAKTHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPTAE
EEALMVAELLGCQPLTGSSATKERVMGALTQAECAHFATHISWKLAALVLTPNPECVPGG
AGATVGVGTIGRGASSRRGSSGRGRKGSVGSGYTIPESLNMQDDSSDVESICDSPPLQEF
LLTAADILDLRLPVKLVVLGSYQESNSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAA
SKVFVHAFYSALLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLI
GQALAEILQYPDRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQAL
LTAVGFRLDSAGTGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEA
GEQLINRAVKNMVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGF
DLCEVGQEEVVLKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSV
SNPLPVGYSSLPFSPPCLDNQASDAISVYSLSSVTSSMSFASKSDCDFLSHRQRGGATAH
YTVHKHPHVPRSRSSPQGAAAAGVGTRGDDEEYEGFSIISSEPLGSHCDSLPLPPGHSQR
HHRGGRGVSGSTGAGRGYTVSVSSRGSVSTPTSPVKTSLVPSPNSPFQKVGKVSSSDTGE
SDQSSTETDSTVKSQEEKPVHLDPQELAQKILEETHSHLRAVSSLQRAGAEGGTGPAAAS
ARSSTFRSSETSAFSRPNSSASGRAQSSPKPKPPSRSSSLQKVSSGYNSPAVSESSQKDG
SHPSPTLDSHAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSAC
STSADAPDLDRLRRGVIDEKVQAIHNLKTFWTNAAAQQQQHLGPVKAIHSTSGPIASASR
DVLSLLNLSPRHCSPHDTQDSLELRELGLQSLDSSTKNSSNGHHCSNPRKVAPSPTISTS
SSPGARSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgttctttgttggtacgttttctagtcaagttaattggtctctctttctatttctccag
ttttctgtctttggttctcggacagcgggaaggcccattcggtgcgtcgcagtggacgac
gggtcacggtgtgcactaagcaaggctgagttcatggagaaagtgcggcagagtaacgag
gcgtgtcagaggggcgacttccaggaggccgtgcgtctgtacggcgatgctttgcaggcc
gacccacagaactgcatcctgtacagtaatcgttcagcagccttcctcaagctgggccaa
caccaagcagctctggaggatgctgaaaaagcctgtgtgctcaatcccaagtggccaaag
gcatacttccgacagggtgttgcccttcagtaccttggtcgccatgcggacgcactggcc
gccttcgcctctgggctggcccaggaccccaagagccttcagctgcttgtggggatggtg
gaagccgccatgaagtcaccgctacgagattctctggagcccacttatcagcagcttcaa
aagatgaagctggacaaaagtccctttgtggtggtgtctgtgattggccaggagctactg
acagcggggcaccacacggcctccgtggtggtgctggaagccgctttgaagataggaacg
tgcagcctcaagcttcgcggctccgtcttctccgccctcagcagcgcccactggtccctg
ggcaacacagagaagagcctcggatacatgcagcaggacttggaggtggccaagacctta
ggtgaccaaactggggaatgccgtgctcatgggaatctgggctctgcattcttctccaag
gggaactatcgtgaagcattaaccaaccatcgcaaccagctggtactggccatgaagtta
aaggacagagaggctgcttcgatggcgctgagcagcttgggtcatgtatataccgccata
ggggactatccgaacgccctcgccagccacaagcagtgcgtcctgctggccaagcagtcc
aaggatcagctgtctgaggctcgtgagctgggaaacatgggagccgtctacatcgccatg
ggagactttgataatgctgttcaatgtcatgagcaacatttgggcatcgctaaggccctg
gaaaataaaagagaagaggcccgagcttacagcaaccttggtagtgcctaccactaccat
cgtaacttcgacaaggccatgtcctaccacacccatgtcctggagcttgcgcaggagctg
gaggaaaagtccatcgagatgagggcgtatgcagggctgggtcacgctgcccgctgtatg
caagacttggagagagccaagcagtaccatgaacagcagctgtcaatcgctgaaggactg
aaggatagggctgcagaaggaagggcgtcctccaacttgggcatcattcaccagatgaag
ggggactacgagactgcactgaaactacacaaaacacacctggctattgctcaggagctc
aatgactatgccgcccaaggcagggcctatggcaacatgggtaatgcctacaatgctctt
ggagctttcgaccaagcagttcgttatcatcgccaggagctgcagatctccatggaggtt
aatgaccgtgcctcacaggcctccacccacggcaacctggctgtggcgtaccaagccctc
ggtgcccatgaccgtgctctacagcattaccagaaccacctcaacatcgctcgagagctg
agggatgtccagagcgaagcacgggctctgggaaacttgggaaactttcactgctctcga
ggagagtttccacaggctgtgccctactatgagcagtacctcagattgtccccagaactt
caggacatggagagtgaagggaaagtttgtcacaatctgggttatgctcactactgcctg
ggcaactaccaggatgctgttaaatactatgagcaggatcttgcgctggccaaggacctt
catgacaaacttagtcaggccaaggcgtattgcaaccttggtttggcttttaaggcccta
ggcgactttactaaggcggaggagtgccagaagtatttgctgtcactagcacagtccctg
aacaatgcacaggctcgctttagagctctagggaacttaggagacatctttgtctgtaaa
aaggacgtgacaggagccattcagttttacgagcaacagctggccttagctcaccaggtt
aaggagcgcaggatggaagcctgtgcttatgctgccctgggggccacctacagactagtg
cagaaatatgacaaagctctaggctaccacacccaggaactggaggtataccaagagctt
ggtgacgtctcaggagagtgcaaagcccatggccacttggcagctgtctacatggccctt
gggaagtacgccatggccttcaagagctacgaggagcagttggagcttggacggaggtta
aaggatcctgttgtggaggctcaggtctatggaaacatgggcatcacaaaaatgaatgtt
ggggtgatggaggaggctattggctatctggagcagcagttggctaccttgcagcagctg
agtggaaacgaagcagtaatggaccggggcagggcctacggaaaccttggagactgttac
gaggctttgggagactttgaggaagcaatcaagtattatgaccagtacttgtcagtggca
cagagcctaaatcgcatgcaggaccaggagaaagcctacagaggcctaggcaatgggcac
agggcaatgggcaatctgcagcagtcattggtttgtttcgaaaaacggctggttgtggca
catgaactcggggagtgcagtggcaaggcacaggcctacggcgagcttggtgcactccac
agccagttaggcaactacgagcaggccatttcctgcctggagcgtcagctggccatcgct
cgcgacacccaggacagactactggagggcgatgccagctgtggcttgggtgctgtgtac
caagctatgggagagtatgagacagccctgcggtgccaccagagtgacctggagatcgca
gaagaagcagccagcaccacacgtcaggcccgggcctacggcaacttgggtcttacctat
gagtcactcggaaactatgagcgagcggtggtgttccaagaacagcaccttagtgtggcg
gctcagactaatgatttggctgccaagacgctggcctatggcagcttggggagaacacac
catgcgctgcagaactactcacaagctgtcatgtacctgcaggaaggcctgcggctcgcg
gagcagctggctcggcgcgaggacgaggcaaagattcgccatcgtctcggcctctccctg
tgggccagtgggaatctggaggaggcccagcatcagctctaccgggcatctgcactgttt
gagaccatccgccatgaggcccagcatagcaccgactataaactctcgctgtttgacctg
caaacctcctgctaccaggctctccaaagggtcctcgtcagccttggccaccatgacgag
gccttggctgtagcggagcgcggtcgtacgcgagccttcgctgatctcttggtggagcga
cagacgggccaacaggactcggacccctacacgcctgtaacagtggagcacatcttggac
acagtcaacagccagagagccttggtgctgtatttctcaatggcagcaggctacctctac
agctggctactggctccaggggcaggaatcctgaagtttcatgaggtttacctcggtgag
ggcgtgtcagaaggagggtcagacttccaggatggaggtggtggtggtgggatggtgagc
agctcttcgctggagcagcacattgccagcgctcgggaggctctgggagttgagtcgtac
tacagcagggggtgttctagcagtgagacagagagcgaggcaggtgattttttggaccaa
cagtttgaagaactcaacaacaagctcaactcagtcaccgaccccacaggcttcctgcgc
atggtgtcgagaaacaacctgttcaacaggagctgtcagagtatgactagcctcttcagt
aacactatgtctcctgccaaagatggtaactcctcactgcctcgacgctccagcaacctt
ggcaaacctccactgcgggcactttacgatttactcattgcacctatggagggggggctg
atgcattccagcgggcctgttggcagacatagacagctagtgatggtcctggaaggagag
ttgtacctcatcccatttgctctgctaaaaggaagctcctctaatgaatacctgtacgag
cgtttcagcctcattgctgtgccctccatccacggccttggattcagcgcaaagactcac
tctcggcgtcctggaccagctccctgtggtggtgtctccatggcagcagtggtgggaaat
cctagactaccctcacctgtgatggaccgctggctttggggacccatgcccaccgctgag
gaagaagctctaatggttgcagagctactggggtgtcaacctcttactggctcatctgcc
accaaggagagggtgatgggtgccctaacgcaggctgaatgcgcccattttgccacccac
atttcctggaaactggcggctctagtgctcaccccgaaccctgaatgtgtacctggtggg
gcaggtgccactgttggcgtgggaacaataggcagaggcgcaagcagtcggagaggcagc
agcggtcgaggcaggaagggctccgttggtagcggctacaccatcccagagtctctcaac
atgcaggatgacagcagtgatgtggagagtatctgtgacagtccgcccctgcaggagttc
ctgctgacagctgcagatattttggacctgaggctgcctgtcaagctggtggtgctgggg
tcgtaccaagaatctaacagcaaggtgacagcagatggtgttgtgggactaaccagagcc
ttcctggctgctggtgctcagtgtgttctcgtgtccttgtggcctgtacccgttgcagcc
tccaaggtttttgtccatgctttctactctgccctgctgaacgggaccaaggctagtgca
gcactagcagatgccatgaagaccgtgcagagcagcaaacagtactctcatccgtccaac
tgggcaggatatatgctgattggcaatgacgtgaagctcaacagcccatcttcccttatt
ggccaagcgttggctgaaattttgcagtatccagatcgagctcgtgatgctctgagagtc
ttacttcacctggtggagaagtctcttcagaggatacaaaatggccaacgtaattcaatg
tatacatcccagcagagtgtggaaaacaaggtcgggggcgttcccggctggcaggccctg
ctgacagccgtgggcttccgtctcgactccgcaggcaccggtattcctgctgcagttttc
tttcccactgctgacccaggagacagactccagcagtgtagcactacgctacaatctcta
ctgggtttgccgccgccagctctccaggctttgtgcaaactcatcactgcttcagaggca
ggagagcagctcatcaaccgggctgtcaaaaatatggtggccatgcttcaccaggtgcta
gtccaactccagacaggagagaaggagcaggacttctccctcctgcccattcaggtgtcc
attagtgtacaactgtggagactgcctggatgccatgaatttctggctgctcttggattt
gatttatgtgaggttggacaggaagaagtggtgctaaagacgggcaaactggctaaccgg
cgcacgttgcactttgctcttcagtctctgctggcactgtttgactccacagaactgccc
aagcgcctgagcctggacagctcatcctcccttgagtctctggcttcggctcagtctgtc
tctaacccattgccagtgggatactccagccttcctttctctcccccatgcctggacaat
caagcatcagatgccatctctgtctacagcctcagctctgtaacttcctctatgagtttt
gcctccaagtcagactgtgacttccttagtcatcgacaacgagggggcgccactgcacac
tacactgttcacaaacacccacatgtgccacgcagtcgctcgtccccacaaggagctgct
gccgcaggtgtaggaacacgaggcgacgacgaggagtatgagggcttttccattatcagc
agcgagccactgggcagccactgtgactctctgcctctaccacccggtcacagtcagcga
caccaccgaggaggcaggggggttagtgggtccacaggagcagggagaggctacacggtc
tctgtatcatcacggggcagtgtcagcaccccgacgtctcctgtcaaaacatcactcgtg
cccagtccaaactcgccgttccagaaggtgggtaaggtgagcagctcagacacaggcgaa
tctgaccagtccagtactgagacagacagtactgtcaagtcgcaggaagaaaaacccgtt
catctggaccctcaagagctggcccagaagattctggaggaaactcacagccacttacgg
gctgtgagcagtctccagcgggccggagcagagggagggactggacctgctgcggcctca
gctcggagcagtacgttccgctcttctgaaaccagtgcattcagtcgtcctaacagcagc
gccagtggtcgagcacagtcttcccccaagcccaagcctccctcccgttcttcttccctg
cagaaggtaagctctggatacaacagccctgcagtctcagagtcttcccaaaaagatggt
agccatccttcccccaccctggacagccatgcacagttcaaactgaagtacccaagctct
ccatacagtggccacatttcccgctctcccagcaacgtgtctcccagctctggacaccag
tcaccagctggtagcgctccgtctcctgctttgtcctactcttctacaggctctgcctgt
tctacatcagcagatgccccagatctggaccggctaagaagaggggtcattgatgaaaaa
gtccaagctatccataacctgaagacgttttggactaatgccgcagctcaacagcagcaa
catctaggtcctgtcaaagccatccacagcacatccggacctattgcttcagccagtaga
gatgtactgagccttctaaacctctccccacgccactgctcccctcatgacacccaagac
agcttggagctgcgggagctgggactgcagtcactggatagcagtaccaagaattcttcc
aacggacaccactgttccaaccccagaaaagttgccccgtcgcctacaatttccacaagc
agcagccctggtgctcgttctatccgactgcctgctggcaacggatacaaattcctctcg
ccaggaagatttttcccttcttctaaatgctga
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integrated database retrieval system
