Gambusia affinis (western mosquitofish): 122827918
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Entry
122827918 CDS
T07758
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122827918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122827918
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
122827918
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GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
MIF4G_like_2
MG280
Efg1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
122827918
NCBI-ProteinID:
XP_043966953
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Position
LG03:10347165..10390641
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AA seq
271 aa
AA seq
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MSGTVQQITLNPGIPYFLRVDWAVDLGAGFTLALTDGSSAWIGEVSEDEVTREANEMGVI
REKYVEDLLQALTKCEERVGVKRNGKEKYSFFLSSDHNLLSYQKICNNILIHLGSVELQP
APDSVELIREMIGKSLQHRADLETESSRLSEENCTLRRDHQRILKELEQQVKDKEMLEKE
IYSRFVMVLNEKKAKIRGLQETVKQLSHTDQQKEDERRQSDGGASQSEDGGHPSQESTIL
IKGCSLVSQGIPIHQSFSDDEERETEETVAS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacggttcagcagattactctgaatccaggcatcccctacttcctaagagtt
gactgggctgtggacctgggtgctggattcacattagctctcactgacggaagctcagca
tggatcggggaagtttcagaagatgaggttacaagagaagccaatgagatgggagtcata
agggagaaatatgttgaagatcttcttcaagctctaacaaaatgtgaagaaagagtggga
gtaaaacgaaatgggaaagagaagtattcttttttcctctcttcggatcacaatcttctt
tcgtatcagaagatctgcaacaacattttgatacacttgggctctgtggagcttcagcca
gcaccagactctgtggagctcatccgggagatgatcgggaagtctctgcagcacagagca
gatctggagacagaaagttcaaggctgtcagaggagaactgtacactgcgacgggatcac
cagcgtatactgaaagagctggagcagcaggttaaggataaggagatgttagaaaaggaa
atatattcgcgttttgtcatggtgttaaatgagaagaaagcgaagatcagaggactgcaa
gagactgtcaaacagctcagccacactgatcagcaaaaagaggatgaaagaagacaaagt
gacggtggggcctctcagagtgaagacggtggacatccctctcaggagtcaactattctc
ataaaaggttgtagtttagtttcacaaggcatccctatccatcaaagtttttctgatgat
gaagagagagagacagaagagacggttgcttcataa
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