Gambusia affinis (western mosquitofish): 122827923
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Entry
122827923 CDS
T07758
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122827923 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122827923 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122827923 (clip1a)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122827923 (clip1a)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
122827923 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
122827923
NCBI-ProteinID:
XP_043966964
LinkDB
All DBs
Position
LG03:25666126..25694811
Genome browser
AA seq
2205 aa
AA seq
DB search
MSTAKPTGIKAPTKIARPPGTGAPKTNPPTAKPGVADKAAVGDGKNAEDEFQIGERVWVN
GNKPGYIQFLGDTQFAPGKWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTRPSKLSRT
EGDANGTQTAPQTRAPSPTPSVGSVASQTPAAKSTLPSSATTVEKASSAAPPAAEPSDLA
KTNSGSVSNLSESGSVKKGEREFKMGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEP
LGKNDGAVAGTRYFQCQPKYGLFAPVHKVSRIGFPSTTPAKAKTTARKVVTTPAGLKKSP
SSSSISTMSSVASSVSTKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHIEQLMAER
DMERAEVAKANSHVSEMEQEISLLREDQEQMEAKMDQLRSLVEAADKEKVELLNQLEEER
RKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQNLLFEKTKAEKLQRELEDTRVATV
SERSRIMELERDLLLRNREVTGLKLRLEMQQNSEDLSGTLSPILEENNSLRDQLSAEEAK
RQEEIKTYREKLEAQEKIHSEVVAQLQATTVMLSSDKEQLQMRLSQAEKDNADTVELWRS
KMASAMEELKVSLSNGADPDAQMEELAETKSALERLKVEHEIALEEAAAKHKAKASALTQ
EMQAQLSSLSEEKERLEESLRSSVEKAEEQHLVEMEDVLGKLHAAETRIKELEEKDTRLA
QQFQDKDTETKDQQGDMATLRSQLAKSNQECVALKSQLEELQNQGDGNSAKVVELRSQLE
GKEQEVVTLLESLTILQQQRDIMESEIKSLNLRLRRSTEELNKAVDTMKETIENLVKKNE
HCTSLANESETLRSQLAVMEGKLKSADEKLEQLSKDKSKLENDISDMMKSSGDNSVQLTK
MNEDLKQKERRLEELQNQMAEEKEKMADLEEKLQKEQSSKGHDTSVLQEKIITLENALKQ
SKSQVEDLKASHEKSLTEASKLHLKESGILQTQFDELKLELSSSKDKTQELEKSMSELQK
YKDQAQWLSAELDTYKHDVDNMSKKLDKQNLDLENMFKQSEDHKAEKCNLERQLSEMQNK
LSVTEISCKEVSVQNEELLATNDKLSKLQEELQTNTKQLDEERTSLKKELENLKHLLQEA
ETENKELHRGKGEYLTQIKELQRENAEMNDSVLKHQLDVQQTESKKKQLLEDYENVCKEK
SQLDEDLKKTESKFTSERDDLILERDSAKNARKSLDAKNAELQEKVKSLNLEKEDLKMKN
VQLQSRVETLTNEKAELSSEVGAAALEKKNQQMEKEALQNKLSQTKKDLESQIRECEELK
ASKGSLAQMLEEFKTNSQVTDSERLTLLQEKEDLLAFQRKVSSEKDDLFRELQELKEKLR
VLTEQLSLSHEKYNAALSSFEQEKHALCLQNSEMEMTLHDLRKEKMSLDSALEQQKMDFE
RLEEEKGELEGKYTKALSEKETLSVEREKLAGDNRTTRGQLDGYSRTNADLLQQKSHLET
KLEETRHQKDELEAKITTLEGEKTDLQNKLQKYCSDIELLEKTKIELVVDHNKVKAEFEK
SNLELSQQVDNLKMDHHHLQSLQTKAEQKAHSFQKENQDLLQEVQELKKEITSLSEAKDL
LETTLQAENCEITKAKADKDDLSKQIEELQNTLSKVMQENENISFDRKNAHEQNKSFKAE
MESLKEQLKQEEQKSHQLGQDREQLSIRLEEMDKQMTLLTSVKEELLASQSELKQETSSL
CAKKETLLAEQSELLQKVECLQASNKQLQAELQAQKIEKENFEKQYKNALEEVSASAVVK
EEISSSVAQLSAQKDALQAERDEAVQQVRELELQLNNAISKQLEASGNAADALEQLVKEK
EALLKEKNEAQSLVEELQRSKDEIQTQLETLRKGNLKYQEDLNTTKEQLCTETQRLKCLC
QEVEELKEAASVTAQTLQMLQEENKRLSQELAGNQKDQGDLVTLTDEHSKLKKESEELKQ
SENALKEQLSREKVSLQQSIHKNSALVAEKDQQVEKLKSELVAVREESASIKTLQNTIET
LEQDKANLHDHVKRLEKDLTVRLDVSLTSGDALLDQLREDKETAESQEAVEFLNSVIVDL
QKKNEELKDKLEKMAAAALNGNSPSELDNDYDKQPEKKKPPPRKFCDICDCFDLHETEDC
PLQEQMPDSPPHTTYHGSKGEERPYCETCEVFGHWTESCTDDQTF
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccaagcccactgggatcaaagctcctaccaagatagctagaccacctgga
actggagccccaaagaccaacccacccacagctaaacctggtgtggctgacaaagcagct
gttggcgatggcaagaatgctgaagacgagttccagattggggagagagtatgggtgaat
ggaaacaagcctggctacatacagtttttgggagatacgcagtttgctccaggaaagtgg
gcaggaattgtcctggatgaaccgatcgggaagaatgatgggtctgtggcaggggtgcgc
tacttccaatgtgaagcccttcgagggatatttacacgcccctccaagttgtcccgcaca
gaaggtgatgctaatgggacccagactgcgccacaaacccgtgcaccgtctcccacccct
tcagttggaagtgtggcctcccaaacccctgctgctaaatcaaccttgccctcaagtgct
accaccgtcgagaaagcctcttccgccgcaccacctgcagcagagccttctgacctagca
aaaacaaacagcggctctgtctccaacctctctgagagtggctccgtcaagaagggggaa
agggagttcaagatgggcgatcgtgtgctggttggtggcacaaaggcaggagtggtgcgt
ttccttggagaaactgattttgccaaaggcgagtggtgtggcgtggaactggatgaacct
cttggaaagaatgatggggcagtggctggcactagatattttcagtgccaacctaaatat
ggcttatttgctccagttcataaagtctcacgtattggcttcccctccacaactccagcc
aaagcaaaaacaacagctcgaaaagtagtgaccacaccagccgggctgaagaaaagcccc
agttcctcttcaatcagcaccatgagctcagtggcgtcctccgtcagcaccaagccaagc
cgaacaggcctgctaactgaaacatcatctaggtataatcgaaagatttcgggcaccaca
gcactgcaggaggccctgaaggagaagcagcagcatattgagcagctaatggctgagagg
gacatggaaagagctgaggtggccaaggccaatagccatgttagcgagatggaacaagag
atcagcctgctcagagaagaccaggagcagatggaggcaaagatggatcagcttcgttcc
ttggtggaagctgcagataaggagaaagtagaactactaaatcagctggaggaagagcgc
aggaaagtggaggatcttcagtttcgagtagaggaggcttgtattaccaaaggagacctg
gagacgcagaccagactggagcatgcccacattaaggagcttgaacagaacctgctcttt
gaaaagaccaaagctgagaaactccaaagagagttagaagacactagggttgctacagtg
tctgaaagatcccgtatcatggaacttgagcgagaccttttactgcgcaacagagaagtg
actggcctgaagctgcgtcttgagatgcagcagaactccgaggacctgagtggcaccctg
tcccctatcctggaagagaacaactctcttagggatcagctttcagctgaagaagctaaa
cgccaagaagagatcaagacatacagagaaaaactggaagcgcaggaaaaaatccacagt
gaggtggtcgcccagcttcaggcgacaactgtaatgctgtccagtgacaaagaacaacta
cagatgcgtttaagccaagcagagaaggacaatgctgacaccgttgaactgtggcgttca
aagatggcgtctgccatggaagagctgaaggtatctttgagcaatggtgcagatccagat
gctcagatggaagagcttgcagaaaccaaaagtgctctggaaaggcttaaggtggagcat
gaaatagctttagaagaggctgcagccaaacacaaagccaaggcctcagctttgacccag
gagatgcaggcacagctgtcgtctctgtctgaggaaaaggagcgactggaagagtcactg
cggtccagtgttgagaaagcagaggagcagcacctggtggagatggaggatgtccttgga
aagcttcatgctgctgaaaccaggataaaggagctcgaagaaaaagataccaggctggca
caacagtttcaggacaaggatacagaaaccaaagatcaacagggagatatggcaactcta
cgcagccagttagcaaaaagtaaccaggagtgtgtggctctgaagagtcaattagaggag
ctccagaaccaaggagatggcaatagtgcaaaggttgtggaactgaggtcacagttggaa
ggtaaagagcaggaagtggtcaccttactggagagtctgactatactacagcagcagagg
gacatcatggagagcgagattaaaagcctgaatctaagactgcggcgaagcacagaggag
ctgaataaagcagttgacacaatgaaagaaacaattgagaatctggttaagaagaacgaa
cactgcacgtccttagctaatgaatcagagaccctaagaagtcagcttgctgtaatggag
ggaaaactgaagtctgcagacgaaaagcttgagcagttgtcaaaggacaagagcaagttg
gaaaatgacatttcagacatgatgaagtcgtctggtgacaattcagtccagctcacaaaa
atgaatgaagatctgaagcaaaaggaaaggagacttgaggagttacagaatcagatggca
gaggaaaaagagaaaatggcagatttggaagaaaagctccagaaagagcagtccagcaaa
gggcatgacacgagtgttcttcaggagaagataattactttggaaaatgctcttaaacaa
agtaagagtcaggttgaggatttgaaggcctcacatgaaaaatccctcactgaggcctcc
aagctccatttgaaggaatctgggattctgcaaacacagtttgacgagttgaagttggag
ctttcctcctccaaggacaaaactcaagagctggagaaatctatgtctgagctgcagaaa
tacaaagaccaggctcagtggctttctgctgagcttgacacctacaagcatgatgttgac
aatatgtcaaaaaagctggataagcagaatcttgatctggaaaacatgtttaagcaaagt
gaagatcataaagctgagaaatgcaatctggagaggcagctttctgagatgcaaaataaa
ctttctgtcactgagattagttgcaaggaggtttcagtgcagaatgaagagctgctggca
actaatgataaactctcaaaacttcaagaggaattacagaccaataccaaacagttagat
gaagagaggacttcactgaagaaggaactggagaatctcaaacacctgctgcaggaagcg
gagaccgaaaacaaagaactgcatcgaggtaaaggtgaatatttgactcaaattaaggag
cttcaaagagaaaatgctgagatgaatgactccgtcttaaagcatcagttggatgttcag
caaactgaatctaaaaagaagcagctgcttgaggattatgaaaatgtttgcaaagagaag
agccagctggacgaggacctcaagaaaacggagtcaaaattcactagtgaaagagacgat
ctgatattggagcgtgattctgcaaaaaatgctcggaagtctcttgacgctaaaaatgct
gaactgcaggaaaaagtgaagtcattgaatttagaaaaagaagatcttaagatgaagaat
gtgcagctccagtctcgggtagaaaccctgacaaatgagaaagctgagttgtcgtctgaa
gtcggtgctgctgctctggagaaaaagaaccaacagatggagaaggaggcgctccaaaac
aaactcagccaaaccaagaaagacttggagagtcaaattcgggaatgtgaagagcttaaa
gcctctaaaggcagcttggcccagatgcttgaagagtttaagacaaacagtcaagtgaca
gattctgaaaggcttaccttgttgcaggaaaaagaagacctgcttgcgttccagaggaag
gtgtctagtgagaaagacgaccttttcagggagctgcaagagttgaaggagaagctccgt
gtcctgacagaacagttgtccctttctcatgaaaaatataatgcggcattatcgtctttt
gagcaggagaaacatgcattgtgtctacagaactctgaaatggagatgacacttcatgac
ttgcgtaaagaaaagatgagcctggattcagctctggagcagcagaagatggattttgag
cgtttggaggaggagaagggagagttggaaggaaagtataccaaggctttatctgagaag
gagactctttctgtggagcgggagaagcttgctggtgataatcgcacaactcggggccag
ttagatggttatagcagaaccaatgctgatcttcttcaacagaagagtcatctggaaaca
aagcttgaagaaactaggcatcaaaaagatgagctggaagccaagatcaccactctggaa
ggagaaaagactgacctacagaataaactgcagaaatattgctctgatattgaacttctg
gaaaagaccaaaattgaacttgttgttgatcataataaagtaaaagcagagtttgagaag
tccaacttagagctttctcaacaggtagataaccttaaaatggatcatcatcatcttcag
tctctgcagaccaaagctgagcagaaagcccattctttccagaaggagaaccaagatctg
ctgcaggaagtccaggagttaaaaaaagagataacatctctgtcggaggcgaaggacctg
cttgagacgactctacaagctgaaaactgtgaaatcactaaagcaaaagctgacaaagat
gatttgtctaagcaaattgaagaacttcagaacactttgtccaaagtaatgcaggaaaac
gaaaatatatcgtttgaccgcaagaatgctcatgaacaaaataagtcttttaaagcagaa
atggaatctctgaaagaacaattaaagcaggaagagcaaaaaagccatcaattgggccaa
gatagggaacagctctcaatcaggcttgaggaaatggacaaacagatgactctattgact
tcagtgaaggaagagcttttggctagtcagtctgaactgaagcaggaaacatcttcgctt
tgcgccaaaaaagaaacattactcgctgaacagtcggagcttcttcaaaaggtggagtgt
ttgcaagcaagcaacaaacagctgcaggctgaactccaggcccaaaagattgagaaagaa
aactttgaaaaacagtacaagaatgctctcgaggaggtgtctgcgtctgctgtggtgaaa
gaagaaatatcctccagcgttgcacagctgtctgctcagaaggacgccctgcaggctgag
agggatgaagccgtccagcaagtcagggagctcgagttgcagctaaataacgctatttct
aagcagcttgaggcttctggtaacgccgctgacgctctcgagcagctcgtaaaggagaaa
gaagctttgctgaaggaaaagaatgaagctcagtcattggtggaggaactgcagcgctcc
aaggacgaaattcagactcagctggaaacactgaggaaagggaatttaaagtatcaagaa
gacctgaacacaaccaaagagcagctttgcacagaaacacagaggctgaagtgtctttgt
caggaagttgaggagcttaaagaagcagcgtctgtgacggcgcagactctgcagatgctt
caagaggaaaacaaaaggctgtctcaggagctggcaggcaatcagaaagaccagggagat
ctggtgacgctaactgatgagcactcaaaactcaagaaagagtcggaagagttgaagcaa
agtgaaaacgctctgaaggagcagctgagtagagagaaggtctccctccagcagtccatt
cataaaaacagtgccttagttgcagaaaaggaccagcaggtggagaaactgaagagtgag
ttggttgcagtgcgggaagaaagtgcctctattaagacgctccagaatacaatcgagact
ttggagcaggataaagctaacctacacgatcacgtaaagagactggagaaggacctcact
gtcaggcttgatgtcagcctgacctcgggagatgctcttttggaccaactgagagaagat
aaggagactgcagagagtcaggaagcggttgagttcttgaattcagtaattgtcgacctc
cagaagaagaatgaagagctcaaagacaaactggagaaaatggcagctgctgccctcaat
gggaatagtccaagtgaactggataatgattatgacaagcagccagaaaagaagaaacct
cctccgaggaagttctgcgacatttgcgactgcttcgatctccacgagactgaagactgc
ccgctacaggagcagatgcccgactccccacctcacaccacctaccacggcagtaagggt
gaagagcggccgtactgcgaaacctgcgaggtcttcggccactggaccgaatcctgcacc
gacgaccagaccttctaa
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integrated database retrieval system
