Gambusia affinis (western mosquitofish): 122828043
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Entry
122828043 CDS
T07758
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122828043 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122828043 (rab11fip1a)
Membrane trafficking [BR:
gaf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122828043 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
122828043
NCBI-ProteinID:
XP_043967171
LinkDB
All DBs
Position
LG03:complement(13515467..13530590)
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AA seq
1207 aa
AA seq
DB search
MSLLDQSQQLFPTSVVVTVHQAQNLRTKGKNGTNDAYAIIQVAKDKFSTSVAEKCVSPVW
KEEASFDLPLFHPGNAERCTLYIIVMHRAQVGLDKFLGQAVVNLLDHHANQSRKKTDWYK
LVDKTGKEDKVRGEVLLDIQFMRNNMSASKKKEGPSDSVSAIVPPVSQVLTDSEGEADAQ
SLDQSPGVKKKSKIRNPFASKSNLQRNISQSLSTLGTLPEKNSSLSASRSSGLNVDSSEG
KKKFKFPGHKRTGSSDSKVSVGAFSLLSRSKHSNSEQNNLCINGSHVYAEEADAKTGSTV
SLNSSGLGSVEDVHKHTSVSADVSKSVDVPSYSHDSADKELLEQRRHQEEANRRQAEEKR
IAEAKRLEEEEKYRAEAKRLQEEEQRRQQEEQERRRRYLEDEAKRRKQEEEEKRNEEERR
RLEAAENQKLEEERRKAEEQKRQEEASMSERLSSLFGMIRKKEDKKDEVQQQSKDEQPPA
ATKSPGHPVSHHSTNAFDNIPLHSDPPSVTNESLSDPQKFSHNQQTPTATLFLNRTAKVS
AVKPRLPQILESEPTDCQSPSQPCPSPAQFESTLPSVPPDSSNTFSSLHLSLAPPNISPS
GSPRGSTEDLSFVGYKGSSPPMADHRRRSTQPPLYYAHRTQPEENQVPVREFKNPAYVED
DGSQQKKVSLPPPDYNMLFPQKRHGVKGQTQWDHLVSEFSLKHRDSTPEPELMGPEISVD
GPVEEPSPQLQVTQETPAIKKHQETRPVSSKKVAAPAPPKHTASQVPPAVADSGQRYGQK
ITPQSLLRSSSPAVPLSAKASSTSTGKSKDGERKVPYSSAVATPTPSRLAAADTTPADDQ
RIVVLNKEAPTAKPRQRASGTKPANEEEPAAKANIQSLSSLNMSGMNKMEKENFTQSNQF
SSSERLPQDPKAQLKHDQEADVVSGNVQRKQKPEKTGGMPGNSDNTLNQDKPSADVNHFE
SVKQGESSKKDEQSNPGSPTFQRRNSSRRKILPSSIRSENIFMSKQEPGPKEATTLPTDD
QVVSARGLSNASVPPQFEMPGKEDQSPAEPFTATSAFPSSLPLSVLLEEPATHAENVPGG
KPLLKAWVSPSEAQSVSSGQGLSPRRPHPVKPLNSAENQSSSSSAVKENRVLFTTPGKTK
LEESGESGPYSELTTEELVKLVVKQQTDLSKKAAKITELEEYIDNLLVRVIEEKPTILQA
LNIAKPV
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgctcgaccagagccagcagttgttcccaacgagtgttgtggtaacggtgcat
caggctcagaacctgcgaaccaagggcaagaatggcaccaacgacgcctacgccatcatc
caggtggccaaagacaagttctctacttcggtggcggagaaatgtgtctctccggtgtgg
aaagaggaggcatcgtttgacctcccgctcttccacccgggaaatgccgagcgctgtacg
ctgtacattatagtcatgcaccgtgcccaggtgggactggacaagttcctgggccaggcc
gtcgtcaacctgctggatcatcacgcaaatcagtcccgcaagaagacagactggtacaaa
ctggtggacaagactggaaaggaggacaaggtgcgaggggaggtgctcctagatatccag
ttcatgagaaacaacatgtcagctagcaaaaagaaggagggtccctcagattctgtctcg
gctatcgtcccccctgtcagccaggtgctcacagacagtgagggggaagccgacgcgcag
tcgctggatcagtctcccggtgtaaagaagaagtcaaaaatcaggaatccctttgcctcc
aaatcaaacttgcagcgcaacatctcccagtcgttgtccacactcgggacgctccctgaa
aagaactcgtcgctctctgccagccgctcctctggcctcaatgtggattcctctgaagga
aaaaagaaattcaaattcccggggcacaagcgaacaggaagctctgacagcaaggtttct
gtgggtgcgttctccttactgagccgctccaagcacagcaacagcgagcagaacaacctg
tgcatcaacggcagccacgtttacgcagaggaggccgacgctaaaaccggatctactgtc
agtctgaacagctcgggcctgggttctgtggaggacgtccacaaacacacgtctgtctct
gcagatgtcagtaaaagtgtagatgtgccttcatacagtcacgattctgcagataaagaa
ctactggagcaacggcgccatcaagaggaggcgaatagaaggcaggctgaggaaaagcgc
atcgcagaggccaagaggttggaggaagaggagaaatacagggcagaggccaagagactg
caggaggaagagcagcgcaggcagcaggaagagcaggagaggagaaggcgctatctagag
gatgaagcaaagaggagaaaacaggaagaggaggaaaagaggaatgaagaagagcgcagg
agacttgaagcagctgagaaccagaagcttgaagaggagcgccggaaagcagaagagcag
aaacgccaggaagaggcctccatgagtgaaaggctgtcatctctgttcgggatgatcaga
aagaaggaggacaagaaggacgaggtccagcagcaaagcaaagatgagcagcctcctgca
gcaaccaagagccctggccaccccgtctcccaccactccactaatgcatttgacaacatc
cctcttcactcagatcctccatctgtcaccaacgaaagtctgtctgacccccagaaattc
agccacaaccagcaaacgcctactgccacgctcttcctcaaccgtactgccaaagtgtct
gcagtcaaacccagattgcctcagattttggagtctgaaccaactgactgccaaagcccc
agtcagccatgtccttccccagcccaatttgagtctacccttcctagcgttccaccagat
tcctccaataccttctccagcttgcacctatcattggctccacctaacataagcccatct
ggttctcctcgcggcagcacagaagatttatcctttgtcggatataaaggatcttcaccc
cccatggcggaccacaggagaagatcaacccaaccacccttgtattatgcacacagaacc
cagcctgaagaaaatcaggttcctgtcagagagttcaagaaccctgcgtatgtagaggat
gatggatcacagcaaaagaaggtttctctgcctcctccggattacaacatgctctttccc
cagaagagacatggtgtgaaaggtcaaactcaatgggaccacctggtctctgagttcagt
ctgaagcatagagacagtacacctgaaccggaacttatgggtcccgagataagtgtggat
ggaccagtagaggaaccaagtcctcagttgcaagtaacacaggagactcctgctattaag
aaacatcaggagaccagacctgtgtcatcaaaaaaggtggcagcccctgctccgcctaag
cacacggcctctcaggtccctcctgcagtggcggactccggtcagagatacggtcagaag
atcactcctcaatctctcctaaggtccagctcacctgcggtcccattatctgcaaaagcg
tcttccacaagcaccggaaagtcaaaagatggagaaaggaaagtgccgtattcctcagct
gtggctacacctacacccagtcgattggctgctgctgatacaaccccagcagatgatcaa
agaatagtcgtcttgaacaaagaggcaccaacagctaaaccaagacaaagggctagtggc
acgaagccagcaaacgaagaggaacctgctgcgaaggcaaacatccaatcattgtccagt
ttaaacatgagtggcatgaacaagatggaaaaggagaactttacacagtctaatcagttt
tccagctctgagcgcctacctcaagacccaaaggcacagctgaagcatgatcaggaagcg
gatgttgtttcaggcaacgtgcaaagaaaacagaaacctgaaaaaacaggagggatgcca
ggtaattctgataacaccttaaatcaggacaaaccatctgctgatgtaaatcactttgaa
tcagtcaaacaaggtgagagcagcaaaaaggatgagcaatccaacccgggcagtcccacc
tttcaaaggaggaattcatcgagaagaaagattctcccgtcctcaattcgctccgagaac
atttttatgtcaaagcaagaaccgggacctaaagaggcaacgaccttacccacagatgat
caggtggtctctgcaagaggtctctccaatgcatctgtcccaccgcagtttgaaatgcct
gggaaggaggatcaatcaccagctgaaccttttactgcgacttcagcttttccctcctcg
ctgcccctctctgttctgttggaggaaccagcaacacatgcagaaaatgtgccgggggga
aaaccactcttgaaagcgtgggtatccccctctgaagctcagtctgtcagtagtggacaa
ggattgagtccacgcaggccacatccagtgaagcccttgaattcagccgagaaccaatcc
agcagctcttctgctgtaaaagagaacagagttttgttcaccacccctggaaaaactaag
ttggaagagtcgggggagagcggcccttacagcgagctgacaactgaggagctggtcaag
ctggtggtcaagcagcagactgacctgtccaagaaagccgccaagatcacagagctggag
gagtacatcgacaacctcctggttcgggtcatagaggagaagcccaccatcttgcaggcg
ctcaacattgccaagccagtgtga
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integrated database retrieval system
