Gambusia affinis (western mosquitofish): 122828336
Help
Entry
122828336 CDS
T07758
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122828336
04121 Ubiquitin system [BR:
gaf04121
]
122828336
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
122828336
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122828336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
122828336
NCBI-ProteinID:
XP_043967732
LinkDB
All DBs
Position
LG03:complement(11360512..11362923)
Genome browser
AA seq
671 aa
AA seq
DB search
MKRTVRRRSSAWSYFEQVGANFVRCKKCDAELKYCGGATSTMISHMAAKHHVSIPLRSAA
ARGSWSETPPSWKAPDTEEESAFNPEREPSERRRNKRSSVWDVFVRVDEEVHCKLCDTKL
KYMSSTTSMMYHIKNKHTETPQSNSVAMPTQAQVTKLVTNMIEKDMFPISVVDGDGFREL
LADIVHSYNVPSADEITRSIECHYHEKAADLRMRLATVEKVALTADFWTAMPSQKYITVS
CSFITEDWQGKSAVLHTHKLPSGGQLTAECVAEKLFSTTQAWMIAGKVPACVHNNKENIQ
LTQGVAQVTWNYVSCFATTLQLAVFDGLSEDVLQIISAAGRLVRHFSRSSPAAEALKEKQ
AQMCLPQHKLIRSDRARWDTVCDMFQCLLEQRWAIKAVLSDRTVTSKHEAQTLEIGDDCW
QVIENFTPVLATLKWATTVISAETEVSISNIYPITFSLIQTHLVPKESDVDQVSSFKLAV
QKSLRDHMEVDSSDLASNPALIASMLDPRHKHLNFLMPAGRLAAKVKLHELVSKLDASAA
GPKDEQLETAVTPDLSQVATARKPPSDTKNTMMLLLGDNYSSSYATDSEAQVDYYLRDIA
PSLDINPLEWWRLNGPRFPKLASLAREYLCIPGVSLPSLLSDAGQSFAAMRTRLNPEHVN
MMVFLNRNASI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcacggtgaggagacggagctccgcgtggagctattttgaacaagtgggcgcg
aacttcgtccgctgcaagaaatgtgacgccgaactcaagtattgcggcggagccaccagc
accatgatatcccacatggccgcgaagcaccatgtgtccattccgttgcggtccgcagca
gccaggggctcttggagcgagacgccgccgagctggaaggctccggacaccgaggaggag
agcgcatttaacccggagcgggagccctcggagaggaggagaaacaagcggagctccgtg
tgggacgttttcgtcagagtggacgaggaggtccactgcaaactatgcgacactaagctg
aaatacatgagcagcaccaccagcatgatgtaccacattaaaaacaagcacacagagacc
ccacagagcaacagcgtggccatgcctacgcaggcacaggtaactaaactcgtcactaac
atgatagagaaggacatgtttcccatcagcgtggtggacggggacggcttcagggagctg
ctggcggatattgtgcatagctataatgtgccctctgctgatgagatcacgcgcagcatt
gaatgccattatcatgagaaggcagcagacctcaggatgcggctggctacagtggagaaa
gtggctctcactgctgatttttggacagccatgccatctcagaagtacatcacagtgtcc
tgttcattcataacagaggactggcagggaaagtcagctgtgctccacacacacaagctg
ccctcaggaggccagctcactgcagagtgtgtcgcagagaagctgttcagcacaacacag
gcctggatgattgcaggaaaagttcctgcatgtgtgcataacaacaaagaaaacatccag
ttaacccagggcgttgcccaggtgacctggaattatgtctcttgcttcgccacaacgctg
cagctcgccgtcttcgatgggctgagcgaggacgttctccagatcatctccgccgcaggg
agactggtccgacacttcagccgcagctcgccggcggctgaagccctgaaggagaagcaa
gcgcagatgtgcctaccacagcacaagctcattaggtccgacagagccaggtgggacacg
gtctgcgacatgttccagtgcttgctggagcaacgatgggcgattaaagccgtcctctcg
gaccgcacagtcaccagcaagcacgaggcccagacactggagataggagacgactgctgg
caagtaatagagaacttcacacccgtcctggcgactctgaaatgggcaacgacggtcata
tctgccgagacagaggtgtccatttcaaacatctatccgataacgtttagcctcatccag
actcatctcgttccaaaagaaagcgacgttgatcaggtctcgagtttcaaacttgcagtg
cagaaatctctaagagatcacatggaggtggactccagcgatttggcttccaacccagct
ctgattgcctccatgctggatcctcgccacaagcacctcaatttcctgatgccagcaggg
aggctggctgccaaggtgaagctgcatgagcttgtctcaaagctggatgccagcgcagct
ggccccaaagacgaacaactggagactgcggtgacacctgacctcagccaggttgccaca
gccagaaaaccaccaagcgacaccaaaaacaccatgatgttgcttctaggagacaactac
agctcgtcttatgccacggactctgaagctcaggtagattactacctaagagacatcgct
ccctcgctcgacataaaccctctcgaatggtggcggctgaatggaccaaggttcccaaaa
ctggcaagtctggcgagggagtatctgtgcataccgggcgtgtcgctgccgtctttgtta
tcagatgcggggcagagctttgcagcgatgcgaacaaggcttaacccagagcatgtaaac
atgatggtctttctgaacagaaatgcatccatataa
DBGET
integrated database retrieval system
