Gambusia affinis (western mosquitofish): 122828385
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Entry
122828385 CDS
T07758
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1-like isoform X1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122828385
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122828385
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122828385
Nuclear receptors [BR:
gaf03310
]
1. Thyroid hormone like
1D. Rev-Erb
122828385
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122828385
NCBI-ProteinID:
XP_043967829
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Position
LG01:5737276..5752569
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AA seq
581 aa
AA seq
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MDNSPGGGGGVILYAGSTGSASPSPGSPSSGYQTQSPSSHSQPSSPEEVTFTEIGAPRQG
RTTGANTPTSKLVFQFPEVFSASSAAAAPQPPYAHPIAGKRPCGFAGTFTKTGGMVLLCK
VCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFKKC
LSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSLNESAAMDMDSSVMDSTTSTDDCSSKE
AIGTISKAYRDIFTGNNSHERSSNRTSISTSSRSSNNNNASTFSQDGGFQPSSHPNSTQS
YQSCPVSHATMYPVASNDNQPLFHKVDNNHYSYLVSTNQNHNQSNTAMGQRISSTSHNSF
PSGKVTQNQPSTCPWKLAPGAKVLACPLNACPVSGAERTSQEIWESFSQCFTPAVKEVVE
FAKGIPGFQELSQQDQVMLLKSGTFQVLMVRFCTLFNAEQRTVTFLNGQTYPLSTLRVLG
MGSLLDAMFEFSEKLGSLGLEPDEMALFMAVVLVSADRSGISDMRAVEQLQEGLIRALRS
LISRRRPDDSALFSKLLLRLPDLRTLNNLHSDKLLAFRIDP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggataacagtcctggaggtggaggtggagtcatcctgtatgcagggtctacaggcagc
gcaagcccgagccctggcagcccctccagtgggtaccaaacacagtcaccctcttcacat
tcccagccttcatctccagaagaagttaccttcactgagatcggggcgcccaggcagggt
cggacaactggggccaacaccccgacctccaaactggtgttccagttcccagaggtcttc
agtgcttcctcggctgcagctgctccacagccaccctatgcacaccctattgcgggaaag
agaccctgcggatttgcgggaacgttcaccaagaccggtggaatggtcctgctctgtaaa
gtttgtggagacattgcatccggtttccactatggagtgcatgcatgtgagggctgcaag
ggttttttccgccgcagcatccagcagaacatcaactacaagatgtgcgtgaagaacgag
aactgtctgatcatgcggatgaaccgcaacagatgccagcactgccgtttcaagaaatgc
ctctccgtcggcatgtcgagagacgctgtgcgttttgggcgcattcctaaacgggagaaa
cagcgacttcttgatgaaatgcagagctatatgaacagcctgaacgagtcagctgccatg
gacatggactcttcagtgatggacagtaccaccagcacagacgactgcagctcaaaagag
gccattgggaccatttccaaagcctatcgggacatatttactggcaataacagccacgag
aggtcatccaacaggaccagcatttccacttccagcagaagcagcaacaacaataacgca
tctaccttttctcaggatggtggtttccaaccatcatctcatcccaactccacccagagt
tatcagtcgtgccccgtctcccatgcaactatgtaccccgttgcctctaacgataaccaa
cctttgtttcacaaagtggacaacaatcattattcgtatttagtgtcaacaaatcagaat
cacaaccagtcaaatactgcaatggggcaaagaatcagctccaccagtcataacagtttt
ccttctggaaaagtcacccaaaaccagccctccacctgtccgtggaaattagcaccagga
gctaaagtgctggcttgccctctcaatgcgtgccctgtatcaggagcagagcgaacaagt
caggagatatgggagtccttttctcagtgtttcacccctgctgtgaaagaagttgtggag
tttgccaagggcatccctgggttccaagaactgagccaacaggatcaggtcatgctgcta
aagtccggcaccttccaggttctcatggtgaggttttgcactttgttcaatgctgagcaa
cgtacagtgaccttcctaaatggccaaacgtaccccctatccactttgcgagtcttgggc
atggggtctcttctggatgcgatgtttgaattcagcgagaagctgggctccctgggcctg
gagcctgatgagatggccctgttcatggctgtggtgctggtttctgcagaccgttctggc
atctcagacatgcgagccgtggagcagctacaggagggcctaatccgcgcccttcggtca
ctgatcagtcgtcgacgcccagacgactctgccctcttctccaagctcctattgcgcctt
ccggacctgcgaaccctcaataacctgcactccgacaaactgttggcctttcgcattgac
ccataa
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