Gambusia affinis (western mosquitofish): 122828452
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Entry
122828452 CDS
T07758
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122828452 (top1b)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122828452 (top1b)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Topoisomerases
122828452 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
122828452
NCBI-ProteinID:
XP_043967997
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Position
LG01:28192562..28203846
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AA seq
768 aa
AA seq
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MSGDHGRGDSQVNSGFKGSDSHKHKDKHKEKEHKHKDHKKDKEREKIKHSNSEHKEYSEK
KHKDKEKLRHSDGSTDRHREKHKDKDKEKRKEDKSLPSHPDKPKKEKENGYVRDRSPAAI
KSEPEDDNGFYPSPKHNKAIKREKDDDEEFEYKPKKVKVEHDKKAKKRKHEYEDDEEEED
TKHKKKTKDKKATEGKKGKKEEEEKWKWWEEERYTDGSKWRFLEHKGPVFAPPYEPLPNK
VKFYYDGKPMKLSAPAEEVATFFAKMLDHEYTTKDIFRKNFYKDWRKEMTSEEKSIITDL
NKCDFREMSEYFKAQSEARKQMSKEEKQKIKEENERILQEYGFCIMDNHKERIGNFRIEP
PGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKQPKPPPGTKWKEVRHDNKVTWLVSWT
ENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRIRTQYRDDWKSKEMRIRQRAV
ALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYPKLDEQEYVVEFDFLGKDSIRY
YNKIPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASIT
LQQQLKELTCPEDSIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDEKQKQ
LSAARKQLKAAKADHKASHDEKSRKTVEVKRKAVQRIEEQLMKLQVQAMDREENKQIALG
TSKLNYLDPRISVAWCKKWSIPIEKIYNKTQREKFAWAIDMAEKDYEF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggatcatggacgcggagattctcaggtcaactctggatttaaaggaagtgac
tctcacaaacataaagacaagcacaaagaaaaggagcacaaacacaaagatcacaagaaa
gacaaggaaagagagaaaataaagcacagcaacagcgaacataaggagtactctgagaaa
aaacacaaagacaaagagaagctgaggcacagtgacggcagcacagacaggcacagagaa
aaacacaaagacaaggacaaagagaagaggaaagaggataagagtttaccatcccatcct
gacaaacctaaaaaggagaaggaaaatggatatgtgagagacagaagtcccgctgccatt
aaaagcgagccggaagatgacaatggcttctatccgtctcccaaacacaataaggccatc
aaacgtgagaaggatgatgatgaggagtttgaatacaagcctaagaaagtcaaggtagaa
cacgataagaaggccaagaagaggaaacatgagtatgaagatgacgaggaggaggaggat
accaagcacaaaaagaagacgaaagacaagaaagcaacagagggaaagaaaggcaaaaaa
gaggaagaggagaaatggaaatggtgggaggaggagaggtacaccgacggctctaaatgg
cgctttcttgaacacaagggtccggtcttcgctccaccttatgagcctttgcccaacaaa
gtcaaattctactatgatggtaagccaatgaagcttagtgctcccgctgaggaagtggcc
accttctttgccaagatgttagatcacgagtacaccactaaagacatctttaggaagaac
ttctataaagactggaggaaggaaatgacatcagaagagaagtcgataatcacagacctg
aacaagtgtgacttcagagaaatgagtgagtacttcaaagcccaatcagaggctcgcaaa
cagatgtccaaggaggagaaacagaaaatcaaagaggaaaatgagcggatccttcaggag
tatggtttttgcatcatggacaaccacaaggaaaggattggaaactttcgcatcgagccg
ccgggtttgttccgaggacgaggcgaccatccaaagatggggatgctgaaacgacgcatt
agacccgaagacatcatcatcaactgtagcaaggactccaagcaacccaaacctccacca
gggacaaagtggaaggaggttcgccatgacaacaaggtgacctggttagtatcctggaca
gagaacatccagggctccatcaagtacatcatgttgaacccgagctccagaatcaagggg
gagaaggactggcagaagtatgagaccgccaggcgtttaaagaagtgcgtggatcggatt
cgtactcagtacagagacgactggaagtcaaaagagatgaggatccggcagagggccgtt
gcactgtattttattgacaagctggctctgagggcagggaacgagaaggaggaaggtgag
acggcagacacggtcggctgctgctcgctgagggtggagcacatcaagctgtatcccaag
ttggacgagcaggagtatgtggtggagtttgactttttgggaaaagattccatccgctac
tacaataagatcccggtggagaagcgggtctttaaaaaccttcagttgtttctggagaac
aagcagccagaggacgacctctttgacagattgaatacttccatcctcaacaagcactta
caggagctgatggatggactgacagccaaagttttccgtacctacaatgcctcaatcacc
ctgcagcagcagctcaaagaacttacctgccctgaggacagtatcccagctaagatcctg
tcatacaaccgagctaacagagctgtagccattctgtgtaaccaccagagagctccgccc
aaaacatttgagaagtccatgcagaatcttcagaccaagattgatgagaaacaaaagcag
ctatctgcagccaggaagcagctgaaggccgccaaggccgatcacaaggcctcacatgat
gaaaagagtagaaagactgtagaggtgaagcgtaaagccgtgcagaggatagaggagcaa
ctcatgaaactccaggtgcaagccatggacagagaggagaacaagcagattgctctgggc
acctccaagctcaactacctggatccacgcatctctgttgcctggtgcaagaagtggagc
attccaatcgagaagatctacaacaagacccagagggaaaagtttgcctgggcgatcgac
atggccgaaaaggattatgaattttaa
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