Gambusia affinis (western mosquitofish): 122828582
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Entry
122828582 CDS
T07758
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122828582
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
122828582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
122828582
NCBI-ProteinID:
XP_043968171
LinkDB
All DBs
Position
LG03:complement(31849175..31862660)
Genome browser
AA seq
2431 aa
AA seq
DB search
MEEHQQLDEVSLRLRSLSIDAEQKMEKYERLISDGKAVAKQGDIQQALKLFKQAFSIHQT
PKLESRIKKIEELLAENDLEDEDDEFVNVNNSGLMLFKELHDKLYDYQRDGVSFLYGLYR
DGRKGGVLADDMGLGKTIQIISFLSGMYDNDLIKHTLLVMPTSLITNWVKEFSKWTPGMR
VKDFHGASKAERTRSLEKVQRRGGVIITTYTMLMNNWQQLASFQGKEFCWDYMILDEAHK
IKNSSTKTAKSAYAIPSKNRILLTGTPVQNNLREMWTLFDFACQGTLLGTAKTFKTQYEN
PITRAREKDATPGEKALGSRMSENLMTLIKPYFLRRTKSEVQKKKTGGKEANSEPDNHQY
PQDQPTSGAVMPKLTRKNDLIVWTYLSAVQEDIYRQFISLDHIKELLMTTKSPLAELNIL
KKLCDHPRLLSANAIAQLGLDQNPQGDNDETDVKSIANVSDETLISESGKLVFLLALLER
LREEGHRTLVFAHYRTVLDILQRILGNRGFKLLRLDGTITQITEREKLISRFQTDKRYSV
FLLTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTENVVIYRLITCGTVE
EKIYRRQVFKDSLIRQNTGDTKNPFRYFSRQELKELFTLEDPRSSSTQLQLQDLHSRERR
TDPALDEHIAQLHAMHMFGISDHDLMFSLDVNHDEDPEDQEACHYIEGRVQKAQELMKAE
SELQMQLDVGTEPAWQRRQQDTREDPNEKNSKHLKPSNPQPVNNNFSNLKRPVAVEMDLC
GPGRNEPPHHKADEHTELSLNTLSQKTSADVEEPMEKSSGSDSNLQITANNDSDKLNRTS
HSEMNLNSSIEAGTFRVLSEPKASKENLEFSDFVAENARTEEDQRLLSPPQLNGKSLLES
LHNKTDHSRDKSNNDLSWTTKKQTAKDNYDSGRDDYEEQQIITLQVSPFQVLTASTPKLP
LFGSSAHHVRKTAGENTPDDFRHSLLQSTIENINAQEIEEEGNKHDKGSDVSRKNVLLTS
EEPQSETFLETSLYSSCEYPVVSKIPLDKTFTLEEDEEENSDDDNETEISESNSEGKQEG
GTESTQLQMDESSSEEEESEEKIQEHEPVENQEELKKEEPDKEKGEGELQVEEPEEIQNE
EVQDNDPQEESVGKKTQDVVVKEEESVKTVTEEAEKENLGGALEEENNSGEDDPQDEKSQ
EEDSEVEEVTRNSLKLTFIDNSPNQKMKPADTTVQRTEPTGPSEPLNTHSRQREPRPSPP
QQDNNVSTAEMDRPGSGAEELWLSLTLNASPQHPAAVEDLMDQTTECDASHLLIMADNKN
GVNRTSHFEMGFEPDFSFEEEPYRENVKFEIFNKNFVLQLESSDSVQEDVESEEGPLSQG
LQKLTTSSANASGLDKSIDEHHEKTPHIKNPTDSSFLVIESNSSGSGSGSHHLRNRDGRS
LSVGSYKSILWSIIKNKDVLDFQGEREDSKDADAPEKINIPLMWKEPQSEETDNREEEDE
AVDMSIPKEEEEDDLIDADDEMKTDSDEDADRSSDGREKEEATHSNPNEPDGEDFQEDKK
QEEEEADKEEIQEEELVQRDTLKEKTQEDLFENVQIQNDESPEWRSEDEYGEKKCDKEAK
NERESEKVQEMEDNSEHDDPQDETQEKLDGRRPQEEEKIQAEETQDWKSREETVEDESEE
EERFDHKTQDKESEDEDMKRMIHSFKSTLISSPNFPKMQLGENVEVSPETDRPGPEADRE
TSQDSQGEDHLNTVPEEVIMDQSGSGGENLQHILTNQDIRHFGASYQEGSADVGELMDES
SETCEKSSVTIKLRDPLTEGGSGDHQESPVYTSFQLFGYYTPESEPSHRSVLQTVITDCQ
EIQEEPRVRNETKTNGEIAEYGSEKGQGDDSCHQELRLHETRGNKEELEEETQEKRFENK
AEEEMQDKLCENDIKKGESEGIQDVQAKESKSREEEESEEEEMREEEFGETVIRCRRRNL
MKRRDQKRRCTRRWRKIELKKKRLKRRRPERWSGRRKCLIVSEWETGDGESELQVDKADE
EDEEEEMQRGESEEKETEEEIHDELEENSFLEEETKTQVSEKEETREVQDRGWESGEDSE
EEESEEEESEEEKMQVEESQEDSGQKEELNMEEFDESEIQGKMEENEIEKEETQQKWEGG
VSDWETEEEESKEQEPEEGGEHLVEDINHLQNALLQSDCSFQAETPRIKPEVDLPCRNFV
LQFEDTTVDLQDSDTEEEEQTLLCELQRNGSFNVEKSLSDSLDRRTFSSCKVSDLDENIT
VPMKRRAAEEEDEELLLHLFNKSLRVLRTSTPTSGASVCSPQITKKRSGRKAQASSHHSL
LHSVTDHQEGEEGSGSGSDGGADVSGQSSEAKEESVAFFTCNESEQEQRSRKSLKTDDEE
EEEGEETHQDSQQSGSGPELTSGQTDPVSEM
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatcagcagctggatgaggtttccctcaggctgagatctctgtccattgat
gccgaacagaagatggaaaagtacgaaaggttgatttcagacggcaaagctgttgccaaa
caaggagacattcagcaagctctgaagctgttcaaacaggccttcagcatccaccaaact
cccaaactggagagcagaataaagaagatcgaagaactcctggctgagaatgacttggag
gatgaagacgacgagttcgtcaatgtgaacaacagcggcttgatgctgtttaaagagctg
catgacaagctgtacgactatcagagagacggagtttccttcctgtacggcctctacagg
gacggccgaaaaggaggagttctggcggacgacatgggactcgggaagaccatccagatc
atctccttcctctctggcatgtacgacaacgacctgataaaacacactcttctggtcatg
ccaacctccctcatcacaaactgggtcaaggagttcagcaaatggactccaggaatgagg
gtgaaggatttccacggtgccagtaaagcagagaggaccaggagtttggagaaagttcag
aggagaggaggagtgatcatcaccacctacaccatgctgatgaacaactggcagcagctg
gcctcatttcagggaaaggagttctgctgggactacatgatcctggatgaagcacacaag
attaaaaactcttccaccaaaacagccaaaagtgcctacgccattccctccaagaacagg
attctcctgacgggaactccggtccagaacaacctcagggaaatgtggaccctctttgac
tttgcctgtcagggaactctcctgggaacagccaagactttcaaaacacagtatgagaac
cccatcacccgcgcaagggagaaggatgctactcctggggaaaaagctcttggctccagg
atgtccgagaacctcatgactctgatcaagccctacttccttcgtagaacaaaatcagaa
gtgcagaagaagaagactggtggaaaagaggcaaactcagaacctgataaccaccaatac
cctcaagatcagccaacctctggggcagtcatgcccaagctcacccgaaagaatgacctg
atcgtctggacttacctgagtgccgttcaggaggacatttacagacagttcatcagtttg
gaccacatcaaggagctgctgatgaccaccaaatcacctctagctgaattaaacatcctg
aagaagttgtgtgaccacccaagactgttgtctgccaatgctattgcacagttaggcctg
gatcaaaatcctcagggggataatgatgagactgatgttaagagcattgcaaacgtttca
gatgaaactttgatatcagaatctggaaagcttgtctttctgttggctcttctggagcga
ctcagagaggaaggccaccgaacgctggtctttgctcactacaggacagtcctcgacatc
ctccaacggatccttggcaacagagggttcaaactgttgagactggatggaaccatcacc
cagatcacagaacgagaaaaactgatctctcggtttcaaacagacaaacgttactccgtg
tttctcctcaccactcaggttggaggagtgggcatcaccctgacagcagcaaacagagta
gtcatctacgatccgagctggaaccctgccacagacgctcaggctgtcgacagagcgtac
cgcattggccagacagaaaacgtagtgatctacagactgataacctgtggaacggtggag
gagaagatctacagacggcaggttttcaaagactccctaatcaggcagaataccggagac
acaaagaacccattcaggtacttcagcagacaagaactgaaggagctcttcaccctggag
gacccaaggtcttcaagcacccaacttcagctgcaggatctgcactccagagaacgacgg
actgacccagctctagatgagcacatcgctcaactgcatgctatgcacatgtttgggatt
tcagaccacgacctcatgttttctcttgatgtgaaccatgatgaggatcctgaagaccag
gaggcatgtcactacatcgaagggcgtgtccagaaggctcaggagctaatgaaggcggag
tctgagctgcagatgcagttggatgtgggcacagaaccagcatggcagagacgacaacag
gacactagagaagaccctaatgagaaaaactcaaaacatctaaaaccttccaacccacag
cctgttaacaacaacttctccaacttaaaaaggccagttgcagttgaaatggatttgtgt
ggtccaggcagaaatgagccaccacatcataaggcagatgaacatactgagctgtcttta
aacaccttgtctcagaaaacttctgctgatgttgaagaaccaatggagaaatcttcagga
agtgattccaacctccagattacagcaaataatgacagcgacaaactgaacagaacctcc
cactctgagatgaacctaaactccagcattgaagcaggcaccttcagagtcctctctgaa
cccaaagcctctaaagaaaacctggagttttctgactttgttgccgagaatgctcgaact
gaagaggaccagagattgttgtctccacctcagttaaatggaaagtctttgttagagagt
ctacacaacaaaactgaccacagcagagacaagtccaacaatgacttgagctggacaacc
aagaagcaaacagccaaagataattatgacagcggtagggatgattatgaagagcagcag
ataatcactctccaggtcagcccctttcaggtgctcacagcctccacacctaaattgcca
ctttttggttcttctgctcaccatgtgagaaagactgctggagaaaacacaccagatgac
ttccgtcattccttgctccagtccaccatagagaatatcaatgctcaggaaatagaggag
gagggcaacaaacatgacaaaggtagtgatgtttcaagaaaaaatgtcctgttgacttct
gaggaacctcagtcagaaacgtttctagagacatctctgtattcctcttgtgaatatcct
gttgtgagcaagattcccctggacaagacattcaccctggaagaggatgaagaagagaac
agtgatgatgacaatgagacggagatatcagagtcaaactctgagggaaaacaggagggt
gggactgaatcaactcagcttcagatggacgaatccagcagtgaggaagaggagtctgag
gagaagatacaagaacatgagcctgtggaaaaccaggaggagcttaagaaggaggagcca
gataaggagaagggggaaggggagttacaagttgaggagcctgaggagattcaaaatgag
gaggtgcaagataatgaccctcaagaggagtctgtggggaagaagacacaagatgtggtg
gtgaaagaggaggagtctgtgaagacggtaacggaggaggctgaaaaggagaacctaggg
ggggcgctagaggaggagaacaactcaggagaggatgaccctcaagacgagaagagtcag
gaggaagattctgaggtggaggaggtgactagaaattccttgaagttgaccttcatcgac
aactctccaaaccaaaagatgaaaccagctgacaccacagtccagagaacagaaccaacc
gggccaagtgagccgctgaacacccatagcagacagagggaaccgaggccttcacctcca
cagcaggacaacaacgtcagcactgcagagatggaccggcctggttctggagcagaggaa
ctctggctgagtctgactctgaacgcctcaccgcaacatcctgctgctgttgaagatctg
atggaccaaacaacagaatgtgatgccagccacctgctgatcatggcagataacaagaat
ggagtgaacagaacttctcactttgaaatgggctttgagcctgactttagcttcgaagag
gaaccttacagagaaaatgttaagtttgaaatattcaataaaaactttgtcctccagttg
gagagcagtgacagtgttcaggaagatgtggagtctgaagaaggccctctgtctcaaggt
ctgcaaaaactgaccaccagtagcgccaatgcctcaggcttggacaagtccatcgatgaa
catcacgagaagacgccccacataaagaatccaactgacagctcctttctggtgattgaa
tcaaactcctctggatctggatctggttctcaccatctgaggaacagagatgggcggagt
ttgtctgtgggttcctataaatccatcctttggtctatcatcaagaacaaagatgttctg
gacttccagggggaacgtgaagacagcaaagatgctgatgcaccagagaaaattaatatc
cctttgatgtggaaagaacctcagtcagaggaaactgacaacagagaagaagaagatgag
gctgtggacatgtctatcccgaaagaggaagaagaggacgaccttattgatgccgatgat
gaaatgaagacagatagtgatgaagatgctgacagatcctctgatggacgagagaaagaa
gaggcaactcattcaaatcccaatgagccggatggagaagattttcaggaagataaaaag
caagaagaagaggaggcagataaagaggagatacaagaggaggaactagtgcagagagac
acccttaaagaaaagacccaagaagacttgtttgagaatgtacagatacaaaacgatgag
agtccagagtggaggtctgaggatgaatatggagagaagaagtgtgataaggaggccaaa
aacgagagggagtctgagaaggtgcaagagatggaggataattcagaacatgatgatccc
caagacgagactcaagagaagcttgatggaaggagaccacaagaggaggagaaaattcag
gcggaggagacccaggattggaaatctagggaggaaactgtggaagatgagtctgaggag
gaggagcgatttgatcacaagactcaggacaaagaatctgaagacgaagacatgaagagg
atgattcattccttcaaatccactctcatcagttctccaaactttccaaagatgcagctt
ggggagaacgtggaagtgagtccagaaacagacaggccaggaccagaagctgacagagag
acctctcaggactcacaaggtgaagatcatttgaacactgtgcctgaggaggtaattatg
gatcagtctggttctggaggagaaaacctgcagcacatcctgactaatcaggatattcgc
cactttggtgcctcctatcaggagggctctgctgatgttggggaactgatggacgaatct
tcagagacttgtgaaaagtccagtgtgaccatcaagctgagagacccgctgactgaaggg
ggctctggagaccatcaggagagtccagtttacaccagttttcagctgtttggatactac
acaccagaatcagaaccctctcatagatctgtcctccagaccgtcatcacagactgtcag
gagatccaggaggaacctcgggtcaggaatgagacaaagactaacggtgagatagctgag
tacggctctgagaaaggacagggagacgattcatgtcatcaggagcttcggctgcatgaa
accagaggcaacaaagaggagttagaggaagagacccaggagaaaaggtttgagaacaag
gcagaagaggagatgcaagacaagctttgtgagaatgatataaaaaaaggagagagtgag
gggatacaggacgtccaggccaaagagtccaaatctagggaggaagaggaatctgaagag
gaagaaatgagagaggaagagtttggtgaaacggtgataagatgcaggaggaggaatttg
atgaaaaggagggatcagaagagaagatgcacaagaagatggaggaaaatagaattaaag
aagaagagactcaaaaggaggagaccagagcgttggagtgggaggagaaaatgtctgatt
gtgtctgaatgggagactggagatggggagtctgagttgcaagtggacaaggctgatgag
gaagatgaagaagaggagatgcaaagaggggagtctgaggaaaaggagacggaagaggag
atccacgatgagttagaagaaaacagcttcttagaagaggaaacaaaaacgcaggtttct
gagaaagaggaaacccgagaagtccaggaccgagggtgggagtctggggaggactctgaa
gaagaggagtctgaagaagaggagtctgaagaagagaagatgcaagtggaggagagtcag
gaggattctggtcagaaggaggagctgaacatggaggagtttgatgagagtgagatacaa
gggaagatggaagaaaatgaaattgaaaaagaggagactcaacagaagtgggaggggggc
gtgtctgattgggagactgaagaagaggagtctaaggagcaagagcctgaggaaggaggg
gagcatctagtggaggacataaaccatctgcagaacgccctccttcagtctgactgcagc
ttccaagcagaaactcccaggataaagcctgaggttgacttgccctgcagaaactttgtc
ctacagtttgaggacacaactgttgacctgcaggactcagacactgaggaagaggagcag
acgctgctatgtgagcttcagaggaatggcagcttcaatgttgagaagtctctgtcagac
agtctggacagacggaccttcagcagctgcaaagtctccgatttagatgaaaacatcaca
gtccctatgaagaggagagctgctgaagaggaggatgaagagctgcttctgcatcttttc
aacaagtcgctccgggttctcagaacctccacaccaacatcaggagcctctgtttgctct
cctcagatcacaaagaaaaggtctggaagaaaagctcaggcgtcctcccatcactccctc
ctccactccgtcactgaccatcaggagggagaagaaggttctggttctggttctgatggt
ggtgcagatgtttcaggacagagttctgaggcaaaggaagagagtgttgctttcttcacc
tgtaatgagtctgagcaggaacagagaagcagaaagagtctcaaaacagacgatgaagag
gaggaagagggggaggaaacccaccaggacagccagcagtcgggttctggacctgagctg
acctctgggcagacggatccagtctcagagatgtga
DBGET
integrated database retrieval system
