Gambusia affinis (western mosquitofish): 122828690
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Entry
122828690 CDS
T07758
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122828690 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122828690 (poli)
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122828690 (poli)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
122828690 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_C
IMS_HHH_1
Cdd1
DNA_pol_lambd_f
IMS_HHH
DUF4332
DUF5581_N
Motif
Other DBs
NCBI-GeneID:
122828690
NCBI-ProteinID:
XP_043968418
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Position
LG03:22558995..22564989
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AA seq
680 aa
AA seq
DB search
MNLSEMDNSDGEVEEDESEWKSCFVDSAAVCPATSPAAASGPVIRIPGSAHRVILHFDLD
CFYAQVEMIRNPALRDVPLGIQQKYIIVTCNYVARERGVTKLMSVTDAKEKCPELVLVKG
EDLTHYREMSYKVTELLLSYCPLVERLGFDENFVDVTEMVEQRLAGISETDSFSFKGNVF
NHCSADANASHHPRLALGSHIAAEMRDAIRSKIGLTGCAGVATNKLLAKLVSGTFKPNQQ
TVLLQESVRDIMGCLSGLRKVPGVGHQTAKRLQALGLVSVKDLQLYPVGDLARELGATAA
QRLRNLALGIDESAVTPTGAPQSLSDEDSFKKMCSVKEVMAKIQELLGSLVERMHKDGRQ
PQTFRLTIRRYSATNKWFSRESRQAPIPGAVGQKMVSGNIEDAVSQLVPLAVKLFHKMVD
CSAAFHLTLINVCFSNLHSRGSAASGKGAITSFFTQSASPRKSHISSTHNQNNSAQNADS
CLLDHQISECSRNVPPKGQMTCSSEQSEENYEASCSTEGINLDKTKPPPHVDPEVFRLLP
EEIQKELLSPYYVNSLQSHMLEHEPLENDSSMKADRSRMNHQQAAGIRVINEEKVMDQEK
LSLPRSSDCNFPGNVDPEVFSELPPDVQKELMSEWKQQNPVLKTPSSRKTGKGSISKGKD
RKAEGRSSQSNNLLKYFKPG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttctgagatggataacagtgacggtgaggtggaggaagatgaaagcgagtgg
aaatcttgtttcgtggattcagctgccgtttgtcctgccacttctccagctgctgcttct
gggccagtcattaggattcctggatctgcacacagagttattctgcattttgacctggac
tgcttttatgctcaggtggaaatgatcagaaacccagctctaagagatgtccctttaggt
atacagcagaaatacatcatagtcacctgtaactatgtggccagggagcggggcgtcacc
aagctgatgtctgttactgatgctaaggagaaatgtcctgaactggtgctggttaaagga
gaagacctgacacactacagagaaatgtcctacaaagtcacagagctcctgctgtcttac
tgtccactggtagagaggcttggatttgacgaaaactttgtggatgtcacagaaatggtt
gaacaaagactggctgggatatcagagaccgacagcttctcatttaaaggaaatgtcttc
aatcattgcagtgctgatgctaacgctagccaccatccaaggctagctcttggttcacac
atcgcagcagagatgagagacgcgatacgcagcaagattggcttgactggttgtgctggc
gtcgccacaaacaagctgctggccaaactggtttcaggcaccttcaaaccaaaccagcaa
acggttttactgcaggaaagcgtcagagatattatgggatgtttgagtggcctgagaaaa
gtaccaggcgtgggccaccaaacggccaagaggcttcaagctttggggttagtcagtgtg
aaagacctgcagctctaccctgtgggtgacctggcgagggagttgggggctaccgccgct
cagcgcctgaggaatctggctctcggcattgatgagtcagccgtcacacccactggggcc
ccacagtctctcagtgatgaagactcctttaagaaaatgtgttcagtgaaggaagtcatg
gcgaagatccaggagctgcttggcagtctggtggaaaggatgcacaaagatggccgtcag
cctcagaccttcaggctcacaatacgaagatactcagcgactaacaagtggttcagtagg
gagagccgccaggccccgatcccaggcgccgtcgggcagaagatggtctctgggaacatt
gaagatgctgtttcgcagctggtcccgttggctgtgaagctcttccataagatggtggac
tgcagcgcggcatttcacctcacactcatcaacgtctgcttcagtaatctgcacagcaga
gggtcggctgcgagcgggaagggcgccataacgtcattcttcacgcagagcgcatccccc
aggaaatcccacatatcgtccacacacaaccagaataattcagcccagaatgctgacagt
tgccttttggaccatcagatcagtgaatgcagcagaaatgttccaccaaaaggtcaaatg
acttgtagctctgaacaatcagaggaaaactatgaagcgtcctgcagcacagagggaata
aatctggacaaaaccaaaccgccaccgcacgtcgacccggaggtgttcaggctccttcca
gaagaaatccagaaggaacttttatctccttattatgtgaattccctgcaaagccacatg
ttggaacatgagccgctggaaaacgattcatcaatgaaagcagaccggtccagaatgaac
caccagcaggcggcgggaataagagtaattaatgaagaaaaagtcatggaccaggagaaa
ttatcgctcccccggtcatctgactgtaacttcccgggaaacgtggaccctgaggtgttt
tctgaacttcccccagatgtccagaaggagctcatgtctgaatggaagcagcagaacccg
gttctgaagactccgtcatccaggaaaacgggaaaaggttccatctccaaaggcaaagac
agaaaggctgaaggaaggagcagccagtcaaataatctgctcaagtatttcaaacccggt
tag
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