Gambusia affinis (western mosquitofish): 122828727
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Entry
122828727 CDS
T07758
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04137
Mitophagy - animal
gaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122828727
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122828727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122828727
03009 Ribosome biogenesis [BR:
gaf03009
]
122828727
04131 Membrane trafficking [BR:
gaf04131
]
122828727
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122828727
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122828727
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122828727
Membrane trafficking [BR:
gaf04131
]
SNARE
SNARE associated proteins
Others
122828727
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122828727
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122828727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
122828727
NCBI-ProteinID:
XP_043968480
LinkDB
All DBs
Position
LG03:complement(15565302..15575087)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLQTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTAGG
SGPSHGSGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggagaatccaaaaatgatgacctacaaactgctattctgaagcaaaag
agcagacccaacagactgattgttgatgaatccatcaatgaagacaacagcgtggtctct
ctctctcaggcgaagatggacgaactgcagctcttccgaggcgacactgttctgatgaag
gggaagaagaggcgggagactgtgtgcatcgtgctctcagatgacacctgctctgacgag
aaggtccggatgaacagggtggtccgcaacaacctgagggtccgtcttggtgatgtcatc
agcattcagccttgtcctgatgtgaagtacggaaagaggattcatgtcctccctatagac
gacacagtggagggcattactggcaacctgtttgaagtctacctgaagccgtactttctg
gaggcttacagaccgatccgcaaaggtgatattttcctggtcagaggtgggatgagagcc
gtggagttcaaggtagtggagaccgatccatccccctactgcatagttgctcctgacaca
gtcattcactgtgagggtgagccaatcaggagagaggatgaggaggagtccctgaatgaa
gtgggctatgatgacatcggaggagttaggaagcagttagctcagatcaaagagatggtg
gagctgcctctcagacatcctgcactgttcaaggccattggagtcaagcccccacgtggc
attcttctgtatggaccacccggaactggaaaaaccttgattgccagggctgtggccaac
gaaacaggagctttctttttcctaattaacggtcctgagatcatgagtaagctggctgga
gagagtgagagtaacctgagaaaggcctttgaggaagcggagaagaatgctcctgccatc
atctttattgatgaacttgatgcaattgctccaaagagagagaagactcatggagaggtg
gagaggcgcatagtttcccagctgctgactcttatggacggcctgaaacagagagctcat
gtgattgtcatggcagccaccaacagacccaacagcattgatccagctctcagaagattt
ggacgttttgacagagaagtggacattggcattcctgatgcgaccggcaggttggagatt
ctgcagattcacaccaagaacatgaaactagctgacgatgttgacttggaacaggtggcc
aatgagacccacggccacgtcggtgcagatctggcggctctctgctccgaggccgccctg
caggccattaggaagaagatggacctgatcgacctggaggacgagactattgatgctgaa
gtcatgaattctcttgccgttaccatggacgacttcaagtgggctctgagccagagcaac
ccatcagctctgagggagacggttgttgaggttcccaatatcacctgggacgatattgga
ggtctggaagacgtcaagagggagctgcaggagctggtgcagtaccctgtggagcatcca
gacaagttcctgaagtttggcatgaccccgtccaagggtgtgcttttctacggtcctcct
ggttgtggtaagactctgctggccaaagccattgccaatgagtgccaggcaaacttcatc
tccatcaaaggacctgaactgctcaccatgtggtttggagaatctgaggctaatgtcaga
gagatcttcgacaaggctcgtcaggctgctccgtgtgtcctcttcttcgacgagttggac
tccatagctaaggctcgcggcggcaacgttggcgatggcggcggagctgccgaccgtgtg
atcaaccagatcctgaccgagatggacggcatgtcgagcaagaagaacgtcttcatcatc
ggcgccaccaacagaccagacataattgacccggccatcctgagacctggccgtctggat
cagctcatctacatccccctgccagacgagaagagcaggatcagcatcctgaaggccaac
ctgcgcaagagtcccatcagcaaggatgtggacttggacttcttggctaagatgaccaac
ggcttctctggcgctgatctcacagagatctgccagcgggcctgtaagctcgccatccga
gagagcatcgagaacgagatccgcagagagcgggagaggcagacgaacccatcagccatg
gaggtagaagaggatgaccccgtgccagagatcaggaaggaccactttgaagaagcgatg
cggtttgcccgtcgctctgtcagcgacaacgacatccgcaaatacgagatgtttgctcag
acactgcagcagagccgaggctttggcagcttcaggtttccctccagcaccgcaggtggc
agcggtccaagtcatggctctggtggaactggtagtggtccagtgttcaacgaagataat
gacgacgatctttatggataa
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