Gambusia affinis (western mosquitofish): 122828730
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Entry
122828730 CDS
T07758
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122828730 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122828730 (thoc5)
03041 Spliceosome [BR:
gaf03041
]
122828730 (thoc5)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122828730 (thoc5)
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122828730 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
122828730
NCBI-ProteinID:
XP_043968485
LinkDB
All DBs
Position
LG03:complement(15596017..15606437)
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AA seq
696 aa
AA seq
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MQASVDIRRFVTAMSTDALKKRKSKVLRGEGGTPETKRGRGEVDQDVRVYNEEGELDGRD
PEQDYLLYKESCENLATVMSEIQELKANGAKEGSAEVELRRMQGCIHFMNLKKLNRLAHM
RLKRGRDQTHEAKQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFFQ
DAPPEISRPSLTKNDPHQLTLARLDWELEQRKRLAEKYEESQSTKEKIQKTIEVKKEHLR
SLQPGLNAIMQASLPVQEYLSMPFEKTQKQAEIARHLPPPLYVLLVQANAYGQACDKNLS
VSICGDVDEARALSKPPDDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPL
SLSLDLQCKEGSTLHLYFFYLMNLNILTVKTSVSTSTDLNAAVSAGDLLKSETLLSCLYT
SDQGRETPNPANRYQFDKVGIVSFGDYVDELGYPYIWVQNLGGLHFPTESSEGVLVGSSL
SASHMETTMKLLRGRVLSRLALHKQFASLEHNIIPISAECQHLFPAKIISHLARWTTITQ
QEYLELPYTHHVTEAGLARETDLYFMGVVERGTARLHAAVVLSPRYPEISPLFSLSLNWK
GECSGRSDDNLRAMESEVNVFKNELQGPKPGHQLLTNQIARLCVCLDVYLETEVQDDSVE
GPREFPREKMCLRTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttccgtcgatattcggcgctttgtgacagccatgtcgaccgatgccttaaag
aagagaaagtcgaaggttctccgcggtgaaggagggactccagagacgaagcgaggccgg
ggggaggtggaccaggacgtccgtgtgtataatgaggagggggagctggacggcagggac
cccgagcaggactacctgctgtacaaagaatcctgcgagaatctggctacagtcatgagt
gagatccaggagctgaaagccaacggtgccaaagaggggagtgctgaggtagagctgaga
cgcatgcagggctgcatccacttcatgaacctgaaaaagctcaaccgtttggctcacatg
cgtctaaaaagagggcgagaccaaacccatgaggcaaagcaaaaggtcgatgtgcttcat
cttcagctgcagaacctcctctatgaggttatgcatcttcaaaaggagatcagcaagtgt
ctcgaattcaaatccaagcatgaagaaattgacctggtgagcgaagaggagttcttccag
gacgctccgccggagatttccaggcccagcctgaccaaaaatgacccccaccagctgaca
ctggcaagactggactgggagctggaacagaggaagaggttggcggagaaatacgaggag
tcacaatccacaaaggagaaaattcagaagaccatagaggtaaagaaggagcatctgaga
agccttcagcctggactgaatgccatcatgcaggcgtctctcccggtgcaggagtatctg
tccatgccgttcgaaaagacccagaagcaggcagagattgcccgtcacctccctcctccg
ctgtacgtgctgcttgttcaagcaaacgcttacggccaagcctgtgacaagaacctgagt
gtgtcgatctgtggtgacgtggacgaggccagggccctttccaagcctcctgatgattct
caagacgatgagagtgattcagatgcagaagaggagcaggagaaaacgaagagaaggagg
ccgacaacaggtggacagctggatgacaaaagacgagagatgctaaaaagacaccctctg
tctctcagcttggaccttcagtgtaaagaaggcagcactctgcatctctacttcttctac
ctgatgaatctgaatattctgactgtgaagacaagtgtctccacctccacagacctcaat
gcggccgtcagcgctggagaccttcttaaatcggaaaccctcctgagctgtctctacacc
agtgaccaaggaagagaaactcccaatccagccaatcgctaccagtttgacaaagtcggg
attgtttcctttggtgactatgtggatgagctgggatatccctacatatgggtccagaat
ctgggaggacttcatttccccactgaatcatcagagggtgttctggtgggcagttctctg
agcgccagccacatggagaccaccatgaagctgctcagggggcgagtcctgtcccgcttg
gctctgcacaaacagtttgcttctttagagcacaacatcattccgatctccgccgagtgt
cagcacctgtttcctgccaagatcatctcccacctggctcggtggaccaccatcactcag
caggagtacttggaactgccctatactcatcatgtcactgaggctggactggccagggag
acagacctgtactttatgggagttgtcgaaagaggaacagcgcgtcttcacgccgcagtg
gtattgagtccccgctacccagagatctctcctctgttctctctgtccctcaactggaag
ggagagtgcagcgggcgcagtgatgacaacctaagagctatggagagtgaagtgaatgtg
ttcaaaaacgagctacagggcccaaagcctggccatcagcttctgaccaatcagattgca
cgcctgtgcgtctgcttggacgtgtatttggagacagaagtgcaagatgacagtgtggag
ggacctcgggagttcccacgagaaaagatgtgtctgcgtactgtcaggggtccaaaccgc
ctgaagccgttcaagtacaaccaccctcagggcttcttcagtcaccgttag
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integrated database retrieval system
