Gambusia affinis (western mosquitofish): 122828759
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Entry
122828759 CDS
T07758
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122828759 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122828759 (ppil2)
03110 Chaperones and folding catalysts [BR:
gaf03110
]
122828759 (ppil2)
04121 Ubiquitin system [BR:
gaf04121
]
122828759 (ppil2)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122828759 (ppil2)
Spliceosome [BR:
gaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122828759 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
122828759 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
122828759 (ppil2)
Chaperones and folding catalysts [BR:
gaf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122828759 (ppil2)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
U-box type E3
122828759 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
122828759
NCBI-ProteinID:
XP_043968542
LinkDB
All DBs
Position
LG03:26256943..26282807
Genome browser
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTNFYGGKRAEIPRSNFKRLPFDHCSLSLQPFEYPVCTEEGVV
FDLLSIVPWIKKYGTNPISGEKLEAKSLIKLNFAKNNDGKYHCPVLYNVFTNNSHIVAIK
VTGNVFSYEAVEQLNIKTKSYKDLLTDEPFTRKDIIMLQDPTNLDKFNVSSFFHVKNNLK
VLDPDEEKAKQDPAYHLKSTNLETRETLAELYKEYKGDQLLASTMKEPEAKKTDKINAAH
YSTGRVSASFTSTAMTPATTHEADAIADDMVRYQYVKKKGYVRLHTNKGDLNLELYCDKV
PKAGENFIRLCKKSYYDGTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCVYLDGKHTVFGRVVGGFETLTAMENVECDTKTD
KPKSEIKLISTSVFVDPYEEADAQIAAEREKELQKQEEEKQQTNMALKKAKEDQAPKTFK
EGVGKYINPAAAKRRAAEDEGGPSTSGQTAKKSKGKTSFGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcatcaaaaggacaaaatgtacatcacgtgtacagaatacaccaat
ttttatggagggaaacgagcagaaatcccccgatcaaactttaaacggcttccgtttgac
cactgcagcttgtccctgcagccgtttgagtatcccgtctgcactgaagagggggtcgtg
tttgacctgctgagcatcgttccgtggattaagaagtatggaactaatccgatctctgga
gaaaaactggaagcaaagtctcttattaagctcaacttcgccaagaacaacgatggaaag
tatcactgccccgttctgtacaacgtcttcacaaataactcccacattgttgccatcaag
gtcactggaaatgtgttttcctacgaggctgttgagcaactaaacatcaagaccaaaagt
tataaagacctgctgactgatgaacctttcaccagaaaggacatcataatgcttcaggac
cccaccaacctggataagttcaatgtgtccagctttttccatgtgaagaacaaccttaag
gtgctcgatccagatgaggaaaaggccaaacaggatccagcgtaccacctgaagagcacc
aacctggaaaccagagagaccttggcagagctctacaaagagtacaaaggggatcagctg
ctggcctccaccatgaaggagcctgaagccaagaagacggacaaaataaacgctgcccat
tactccacaggccgagtctccgcctccttcacctccaccgccatgactccggcaacgacg
cacgaagcagatgcaattgcagacgacatggtgcgttaccagtacgtgaagaaaaaaggc
tacgtccgtctgcacacaaacaagggagacctgaacctggagttgtactgtgataaggtg
cccaaagctggggagaatttcatccgtctgtgtaaaaaaagctactatgatgggacgatc
ttccacaggtccatccgcaattttatgattcagggaggggatcccaccggtacaggcaca
ggtggcgagtcgttctggggaaaaccgttcaaagacgagtttcggcccaacttgtctcac
acgggccggggagttctgagcatggccaactccggcccaaacaccaacaaatctcagttc
ttcatcacgtttcggtcgtgcgtgtacctcgacgggaagcacacggtgtttggaagggtt
gttggtgggtttgagacgctcacagccatggagaatgtggagtgcgacaccaaaacagac
aaaccaaagtcggagatcaagctgatcagcacttccgtgttcgtggatccgtacgaagag
gccgacgctcagattgcggcggagagagaaaaggagctgcagaaacaggaagaggagaag
cagcagaccaacatggcgctgaagaaggccaaggaggatcaggcgccaaaaacctttaag
gaaggcgtgggcaaatacatcaacccggccgcggcaaaacgtcgggctgctgaagacgag
ggcggcccgtccaccagcggacaaacggccaagaagtccaaagggaagacgagttttgga
gatttcagctcctggtag
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