Gambusia affinis (western mosquitofish): 122828862
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Entry
122828862 CDS
T07758
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122828862 (rbm39b)
Spliceosome [BR:
gaf03041
]
Common components
Common spliceosomal components
General mRNP proteins
122828862 (rbm39b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RRM_5
RRM_7
NCBP3
RRM_8
Motif
Other DBs
NCBI-GeneID:
122828862
NCBI-ProteinID:
XP_043968770
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Position
LG01:30422706..30428432
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AA seq
499 aa
AA seq
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MADDFDVEAMLEAPYRKDENKSYHANGHDEHGKKKRRSRSRSRSPGSKKKKSRSRSKDRK
KSKKRSRSRDKKRSRSRERHRSGSKSRDRAGRYKARKSPIRKRSRSRSPFKKEKSPVRQP
IDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF
VESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSIPFGGIPPPAVPTPASSQALNLPSQPLATHCLQLSNLFNPQAENDPNWASEIQDDVI
DECNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTY
HNLFPDSVTAKQLLMPSRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgattttgacgtcgaggccatgctggaagcgccttacagaaaggatgagaac
aagtcctatcatgcaaatggacacgatgaacacggcaagaagaagagaaggagtcggagt
aggagccgcagtccaggctcaaagaagaagaaaagccgtagcaggagcaaagacaggaag
aagagcaagaaaagaagcaggagcagagataaaaagcgcagccgcagcagggagcgccat
cgcagcggctccaaaagcagggatcgggctgggcgctacaaagcacgcaagagccccatt
cgaaaacgttccagaagtcgaagtcccttcaaaaaagaaaagagtcctgttaggcaacca
atcgacaatctgacaccagaggaaagggatgcccgcacagttttctgcatgcagcttgct
gctagaatcagagctcgtgacctggaggatttcttctcagctgttggaaaggtcagagat
gtgagaatcatctctgatagaaactctcggaggtcaaagggtattgcatacatagagttt
gtggagtcgtcttctgtaccactggcaattggactaactggtcagaggcttttaggtgtg
cccatcattgtccaggcttctcaggcagagaaaaatagagctgctgctgcagccaataac
ctacagaagggcagtgcaggtcctatgagactttatgtgggttcactacattttaacatc
actgaagaaatgctgcgagggatttttgaaccttttggaaagattgaagggatccaactc
atgatggacagcgagactgggagatccaaaggatatggtttcatatcgtttgcagatgca
gagtgtgcaaagaaggcgttggagcagttgaacgggtttgagctggcaggacgtcccatg
aaggtgggacacgtcacagaacgttcagattcttccacggctagttcttttctggacaat
gatgagctggagaggactggcatcgaccttggcacaacaggccgtctgcaactcatggct
cggctggcggaaggaactggcttgaaaatcccccctgctgctcagcaggctctgcagatg
actggatccataccttttgggggcatacctcctccagcagttcctactcctgcatcaagc
caagccttgaacctcccatcacagccgctggccacacactgtctgcagctgtccaacctg
tttaacccacaggcagaaaacgatcctaactgggcctctgaaatccaagacgatgtgatt
gatgaatgcaacaagcacgggggagtcgttcacatctatgttgataaaaactctcctcag
ggtaatgtgtatgtgaagtgtccctcaatacctgcagcaatggcaacagtaaatgcactt
catggacgctggtttgcaggtaaaatgataacggctgcttatgttcctttaccaacctac
cacaacctcttcccagattcagtaacggcaaagcagcttctaatgccttcacgtcgatag
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integrated database retrieval system
