Gambusia affinis (western mosquitofish): 122828880
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Entry
122828880 CDS
T07758
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122828880 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122828880 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122828880 (usp30)
04121 Ubiquitin system [BR:
gaf04121
]
122828880 (usp30)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122828880 (usp30)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122828880 (usp30)
Membrane trafficking [BR:
gaf04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
122828880 (usp30)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122828880 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
122828880
NCBI-ProteinID:
XP_043968826
LinkDB
All DBs
Position
LG03:complement(16325260..16333569)
Genome browser
AA seq
506 aa
AA seq
DB search
MDNRMLWCRPESWNKLVGEFLGTRPTIRNKMIKNWGLVGGIAAAIAAGLYVLWGPITERK
KRKRGMVPGLLNLGNTCFLNSLLQGLAACPSFVNWLERFSGLPSIQSCKDNQLSSTLLQL
LKALSSEEPGDEEVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERNRQPKV
THLFDMQSLESLPDEEDKTVACISRAPLHPIPGLWKFQHPFHGRLTSNMSCKHCEIQSPV
RYDSFESLSLSIPLPQWGRPLSLDQCLQHFISSETIKEVECENCTKLQQSSTRNGQVFES
QRTTFVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEYLSMDRYKHNNSTQRS
QRFTSTPIAIKTESLEDSTERLKANGTGAEHHNNNRPFSNGTCSSVFLLSPGLNPQLGLT
YDFSSAEYLFQLTAVLVHHGDMHSGHFVTYRRSPPSPCGASPFSCQWLWVSDDSVRKASL
QEVLSSNAYMLFYERARRPTIDRVVA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagaatgttgtggtgcagaccagaaagctggaataaacttgtgggggagttt
cttggcacaaggcccacaatcaggaacaagatgataaaaaactggggtctcgtcggaggg
atcgcggctgctattgcagctggattatacgtcctgtggggcccgatcactgagaggaag
aagaggaagagaggaatggtcccaggtctgctgaacttgggcaacacctgcttcttgaac
tccttgcttcagggtttggcagcatgtccgtctttcgtcaattggctggagaggttttca
ggcctgccctcgatccagtcatgcaaagacaaccagctgtcctccacgctgctgcagcta
ctcaaagctctgtccagtgaggagcctggagacgaggaggttttagatgctggatgcctc
ctggatgttctcagactgtatcgctggcacatcagctcatttgaagagcaggatgcacac
gaactttttcacgtcctcacgtcttctctagaggaggagcgaaatcgacaacctaaagtc
acacatttgtttgacatgcagtccctggagtctcttcctgacgaagaggacaaaactgtg
gcctgcattagtcgagctcctcttcatccgatacctggtctctggaagttccagcatcct
tttcatggtcgtctaacgagcaatatgtcgtgcaagcactgtgaaattcaaagtccagta
cggtacgactcatttgagagcctctccttgtccatccctcttcctcagtggggtcggcct
ctctctctagatcagtgtctgcagcatttcatttcgtcagagacaatcaaagaggtggag
tgtgaaaactgcacaaagcttcaacaaagctcgacaagaaatgggcaagtttttgaaagc
cagaggacaacgtttgttaaacagcttaaacttggaaagctccctcagtgcctctgcatc
cacctacaaagactgacgtggtccagcgaaggaacgcccatcaagcgacaggagcacgtc
cagttcacggagtatctatcgatggatcgctacaaacacaacaactccacgcagaggagt
cagcggttcacatcgactcctatagccataaaaacagaaagtttggaggattccacagaa
aggctaaaagctaatgggacaggtgcagaacatcataacaataacaggcctttctctaat
ggaacctgttcttctgtgtttcttctctctcctggtttgaacccacagctcggtctcacg
tatgacttcagctccgcagagtatttattccagctaacagcggtgttggttcaccacggt
gacatgcactcaggacattttgtcacctaccgccgcagccctccctcgccctgcggcgcc
tcacccttcagctgtcagtggctctgggtgtctgacgactctgtgcggaaagccagcctg
caggaggtgctgtcttccaacgcgtacatgctcttctatgagagagcgcgacggccgacg
atcgatcgagtagttgcctga
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integrated database retrieval system
