Gambusia affinis (western mosquitofish): 122828918
Help
Entry
122828918 CDS
T07758
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04517
IgSF CAM signaling
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122828918
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122828918
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122828918
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122828918
Intermediate filaments
Intermediate filament-binding proteins
122828918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SCAR_helical
BORCS6
Motif
Other DBs
NCBI-GeneID:
122828918
NCBI-ProteinID:
XP_043968898
LinkDB
All DBs
Position
LG04:complement(251832..279593)
Genome browser
AA seq
2340 aa
AA seq
DB search
MMTTVAAKYDPMELHGQYSSSDTVNNRWDNDGDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYSNVNIHNFTSSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVEHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEAERYHDIKRIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVVNNANKYSMAD
SGYKPCDPQIIQDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSMEHGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGRAMVDAGHFGAAKIQER
VSDLQAQWAALEQLAAVRKKRLEEALAMHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRSVIDSLHEQVALLPKEEAESEDVQGRLAGIEERYKEVSELT
KLRKQALQDALALYKMMSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFENLEPEM
NNQASRVAVVNQIARQLIHSGHPSETNIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIKEKTKLIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLRGE
AQRLAEEHPDQANAITDRLAEITAVWDEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLSEAEKLMAQHESIKNEIHNYEEDYQKMRDMGDMVTQGQADAQYM
FLRQRLQALDTGWNDLLKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEGAIKKQEDFMTTMDANEEKINSVVEAGRRLASDGNINAERILERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGTLLVSEKPETEAVVKEKLASLHSLWEKLESTTQTKAQGLFD
ANKAELFTQSCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVDVRQREVVE
LQSQVKALGQEVKDTDEVDGRRRVVEKKFQELLEPLRRRRNFLVASREVHQFNRDVEDEL
LWAQERMPVATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDIMERSRSLLQDKSSN
TDSIRQRLADLQQLWKELIEEVEQRHGRLEEAHKAQQYYFDAAEAESWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVAAGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIADKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAARLQSAYAGDKADDIQRREGEVLEAWRILLEACDGRRLRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHFASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSRELGRSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRQQEEEERMRK
PLGPEPVLVQQDGPQQQSAVTQNGLPSDRDQDSPQDCVEGGDLVNGMVERGSKEPSPAPS
PTSARKSGSSQSATMPASSQEAPALLEGPLHRKHEWEGPNKKASNRSWHHVYCVIRGAEL
SFYKDSKAAAQGTPYHGEAPVGLKDAACDVASDYKKKKHVFKLRVSDGNEFLFQAKDEEE
MSSWIQAVLSAERPAPGAALGTPPSGRAQTLPASVSLPAESSPGKRDKEKRFGLFSKKKQ
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggcggccaagtacgacccgatggagctgcacggccagtacagcagc
agcgacaccgtcaacaaccgctgggacaacgacggggacaacgagaacagctccgcccgg
ctcttcgagcgctcgcgcatcaaggctctggcagatgaacgtgaagcggtccagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggatcaccgacctt
tacctggacctgagggacggacgcatgctcatcaagctgctggaggttctgtccggagag
aggctgccaaagcccaccaaaggccggatgcggatccactgcctggagaacgtggacaaa
gcgctgcagttcctgaaggagcagcgggttcacctggagaacatgggatcccacgacatc
gtcgatggcaaccaccgacttactctgggcctcatctggaccatcatcctgcgcttccag
atccaggacatcagtgttgagactgaagacaataaggagaagcgatcggccaaggacgcc
ctgctcctgtggtgccagatgaagacggccggttattccaatgtcaacatccacaacttc
accagcagctggagagacggcatggccttcaacgccctcatccacaaacacagacctgac
ctgatcgacttcgacaagctgaagaagtccaacgctcactacaacttgcagaatgcgttc
aacctggcggagcagcacctgggcctcaccaagctgctggacccagaagatatcagcgtg
gagcatcctgatgagaagtctgtcatcacctacgtggtcacctactaccactacttctcc
aagatgaaggcgctgaaggtggagggcaaacgcatcgggaaggtgttggacaacgccatc
gagaccgagaagatgatagagaagtacgagtcgctggcgtcggacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactcgctggtgggcgtccag
cagcagctgcaggccttcaacacgtaccgcaccgtggagaaaccgcccaagttcacagag
aaggggaacctggaggttctgctcttcaccatccagagcaagatgagggccaacaaccag
aaggtctacatgccccgcgaggggaagctcatctcagacatcaacaaggcctgggagcgt
ctggagaaggcggagcacgagagggagctggctcttcggacggagctgatccgacaggaa
aaactggagcagctggccagacgctttgaccgcaaggcggccatgagggagacctggctg
agtgaaaaccagaggctggtgtctcaggacaactttggcttcgacctccaagctgtggag
gcggccaccaagaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgtgtt
caggcggtggtcgccgtggcgaaggagctggaggcggagcgttaccacgacatcaagcgc
atcgcggcccgaaaggacaacgtgatccggctgtgggagtatctgctggagctgctgaag
gcccgccggcagcggctggagatgaacctgggcctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgctgctgctgtctcaggactacgggaaa
cacctgctgggcgtggaagacctgctgcagaaacacgcgctggtggaggccgacatcgcc
atccaggccgacagggtgaaggccgtcgtcaacaacgccaacaagtactcgatggccgac
agcggctacaagccctgtgatcctcagatcatccaggaccgggtggcccacctggagttc
tgctaccaggagctgacccagctggccgctgagcgccgtgcacgtctcgaggaatctcgc
cgactctggaagttcttctgggaaatggcggaggaagagggctggatccgggagaaggag
cagatcctgtcctccatggagcacggcaaggacctgaccggggcggtgcgcctcctgagc
cagcagcgggccctggaggacgagatgagtggccgggccggacacctgcagcacaccatc
gctgagggccgggccatggtggatgcgggtcactttggtgctgccaagatccaggagcga
gtctcagacctgcaggctcagtgggcggcgctggagcagcttgcagcagtgagaaagaag
agactggaggaagctctggccatgcaccaattccaggccgatgcggacgatgtggatgcg
tggactctagacgctctgcgcatcgtctccagtggagagacgggccatgatgagttctcc
acccaggctctggtcaggaagcacaaagatgctgcagcagaggtggccagctaccgttcg
gtcatcgactctctgcatgagcaggtcgcactgctgcccaaagaggaggcggagtcagag
gacgtgcagggccgcctagctggcatcgaggagcgctacaaggaagtgtccgagctcacg
aagctgaggaagcaggcgctccaggatgcactggctctctacaagatgatgagtgaggct
gacgcctgcgaagtttggatcgacgagaaggagcagtggttgaacagcatggagattcct
gagaaactggaggatctggaggtgatacagcacaggtttgagaatctggagccagagatg
aacaaccaagcgtctcgcgttgctgtggtgaaccagattgcccgacagttgattcacagt
ggccatccaagcgagacaaacatcaagactcagcaggataaactgaacaacaggtggagc
cagttccgagacctggtggaccagaagaaggagtccctgaactctgctctgggtgtacag
aactatcatctcgactgcaatgagaccaaatcctggatcaaagaaaagaccaaactaatc
gagtccacccaggaactgggcaatgacctcaccggagtcatggctctgcagaggaagctg
accggcatggagcgagacttggtggccatcgaagacaagctgggtgacctgcggggtgaa
gcccagaggctggctgaggagcaccctgaccaggccaacgccatcacagaccggctggct
gagatcactgctgtctgggatgagatgaagaatactttgaaaacacgagaggagtccctg
ggtgaagccaggaagctgcagcagttcctgcgagagcttgacgacttccagtcctggctg
tcccgcacgcagacagctatcgcctccgaagacatgcccaacacgctgtctgaggccgag
aagctcatggcccaacacgaaagcatcaaaaatgagatccacaactacgaggaggactac
cagaagatgagggacatgggggacatggtgacgcagggccaggcggacgcccagtacatg
ttcctgaggcagcggctgcaggcgctcgacaccggctggaacgacctgctcaaaatgtgg
gagaaccggcagaacctgctgtcccagtcgcacgcctaccagctgttcctgagggacacc
aagcaggccgaggccttcctcaacaaccaggagtacgtgctggctcacacagagatgccg
accaccctggagggcgccgagggggccatcaagaagcaggaggacttcatgaccacaatg
gacgccaacgaggagaagatcaacagtgtggtggaggcaggcaggaggctggccagtgac
gggaacatcaatgctgagcgcatccttgagagagtggcctccatcgacgacaggcacaag
aagaacagggaggcagcagtggagctgctgatgagactgaaggacaaccgcgaccttcag
aagttcctgcaggactgccaggagctgtctttatggatcagtgagaagatgctgacggct
caggacatgacctacgacgaggcccggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggctgagctgcagtccaacaaggagtggctggacaagatccagaaggacgggacg
ctgctggtgtcggagaagccagagacggaggcggtggtgaaggagaagctggcgtcactc
cactccttgtgggagaagcttgagtccaccactcagaccaaagctcagggtctgtttgac
gccaacaaggccgagctgttcacacagagctgtgccgacttggacaagtggctgggcagc
ctggagggccagatccagtccgacgactacggcaaagacctgacatctgtcaacatactt
ctgaagaaacagcagatgctggagaaccaggtggatgtgcgccagagggaggtggtggag
ttgcagagccaagtgaaggcccttggtcaagaggtgaaggacacagacgaggttgacggg
aggagacgggtggtagagaagaagttccaggagctgctggagccactgcggcgtcgcaga
aacttcctggtggcatccagagaggtccatcagttcaaccgtgatgtggaggatgaactg
ctctgggcccaggagaggatgccagtggccacatccactgagcatggacacaacctgcag
acagtccagctgctcatcaagaagaaccagactctgcagaaggagatccagggccatcag
ccccgcatcaacgacatcatggagcgcagccgcagcctactgcaggacaagtcctccaac
accgactcgatccggcagcgcctggccgacctgcagcagctgtggaaggagctgattgag
gaggtggagcagcggcacggccgactggaggaggcccacaaagctcagcagtactacttt
gacgccgctgaggccgagtcttggatgagtgaacaggagctctacatgatgtcagaggag
aaagccaaggacgagcagagcgccgtaaccatgctgaagaagcatcagatcatggagcag
gctgtggaggactatgcagagaccgtccatcagctgtccaagaccagccgaggactagtg
gccgccggacaccctgaaagcgagcggatcagcatgcgccagtctcaggtggacaagctg
tacgccggcctgaaggacctgtctgaggagaggcggggcaagctggatgagaggctccgc
ctcttccagctcaacagggaggtggacgacctggagcagtggatcgccgaacgggaggtg
gtggccgggtctcacgaactgggccaggactacgaacatgtcacgatgctgcaggaacgt
ttccgggagtttgcgcgggacaccgggaacatcgggcaggagagagtggacgccgtgaat
cggctggcggacgagctaatcaacgctgggcatgccgacgcggccacagtggcggagtgg
aaggacgggctgaacgaggcgtgggccgacctgctggagctcatcgacactcggacgcag
atcctcgccgcctccttcgagctccacaagttctaccatgatgccaaggagatcctggga
cgcatcgcagacaagcagaagaagctgccggaggaggtgggtcgggaccagaacacagtg
gagacactgcagaggatgcacaacaccttcgaacacgacatccaggcgctgggaacacag
gtgaggcagcttcaagaggatgccgcgcgcctgcagtcggcatacgccggagacaaagcc
gacgacatccagcggcgggagggtgaagtgctggaggcgtggaggattctgctggaggcc
tgcgacggacgcaggctccgcctcctcgacaccggggacaagttccggttcttcagcatg
gttcgcgacctgatgctctggatggacgacgtgatccggctcattgaggcccaagagaag
cccagagacgtttcctcagtggagctgctgatgaacaaccatcagggcatcaaagcggag
atcgacgcccgcaatgacagcttcacagcctgcatcgagctgggcaaggccctgctggcc
cgcaagcacttcgcctcagaggagatcaaggagaagctgctgcagcttaccgacaagagg
aaggagatgatcgacaagtgggaggaccgctgggagtggctccgcctcatcctggaggtg
caccagttctcacgggacgcgggcgtggccgaggcctggctgctgggccaggagccctac
ctgtccagccgggagctgggccgcagcgtggacgaggtggagaagctcatcaagcgccac
gaggccttcgagaagtccgccgccacctgggaggaacgcttctccgccctggagcggctg
accacgatggagctgctggaggtcaggaggcagcaggaggaagaggagagaatgaggaag
ccactgggtccagaaccggttctggtccagcaagacggaccccagcagcaaagcgccgtg
acccagaacggactcccatcggatcgggaccaggactctcctcaggactgcgtggaaggt
ggcgacctggtgaacggcatggtggagcgcggctccaaggagccgagccccgccccctcg
ccgacctcggccaggaagtcaggcagcagccagtcggccacgatgccggccagcagccag
gaggcgccggcgctgctggaggggccactacaccgcaagcacgagtgggaggggcctaac
aagaaggcgtccaacaggtcctggcaccacgtgtactgtgtgattcgcggcgcagagctg
agcttctacaaggacagcaaggcggcggcccagggcaccccgtaccacggggaggcaccc
gtcggactgaaggacgccgcctgtgacgtcgcctcagactacaagaagaagaaacatgtc
tttaagctcagagtctccgatgggaacgagtttctgttccaagccaaagatgaagaggag
atgagctcgtggatccaggccgtgctgagcgcagagcgccccgccccgggcgccgccctg
ggcacgccaccctctgggcgcgctcagacgctcccggccagcgtgtcgctgcccgccgag
tcgagcccggggaaacgggacaaggagaaacgcttcggcctgttcagcaagaagaaacag
tag
DBGET
integrated database retrieval system
