Gambusia affinis (western mosquitofish): 122828930
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Entry
122828930 CDS
T07758
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122828930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122828930
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122828930
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122828930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-UDP
WWE_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
122828930
NCBI-ProteinID:
XP_043968933
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Position
LG04:complement(893829..915147)
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AA seq
774 aa
AA seq
DB search
MKEFVKVCTRSLGSGGRTQESNRATSNNMLLASAVVVWEWLNEHGRWRPYSPAVSHQIEA
AIRSSDPRGGSVVLGQVDSRLSPYIIDLQSMHQFRQDTGTIRPVRRTFYDPASAPGQGWQ
WEWENDAGTWTPYDMEVAIAIESAHSRQQTCLDLTPLGFCYLIDFKNMTQVNRQSQRCRR
IQRRADLAYPLVSGPLPVPKGGAVGGGGGLTGALLGVGVSGASMGVGGPVTSNGGLPVLG
LGQPCSCQQCLLVLSVKSGAGGAGGGAAAIQTLNRRALTMQRPKNSAPPALRPLSPSKSA
TLGRGLQQSPAYYQTLPHGLAITKNTASPRRNAQLFAQSLAALTAGASSMGLSAPSSRPP
PPALPPPQPPASNQNPPSIPPKLSSSSSSATEPVPTATLITPASAVTTPPSPVPSPSPVV
MKPQRTPSSTAACHAPLPQRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSP
VHPALAGITGILMSAAALPVCLTRPPKLVLHPPPVSKSDIKPVPGFNHSCRKTTKKQVRK
GKTPEEVVKKYLQKVKSPPEEDCTICMEPLGGPSGYKGPGVGPVSKAESVGRLAQCGHQY
HFQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKSIRII
YNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSST
TGESDTVIWNEVHHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEEDALVEK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagtttgttaaagtttgtaccagaagtcttggatcaggagggaggacgcaggag
tccaacagggccaccagtaacaacatgctcctggcctccgctgtggtggtgtgggaatgg
ctcaacgagcacggccggtggcggccctacagccccgccgtctcccaccagatcgaggcg
gccatccggagcagcgacccccgcggagggagcgtggtcctcggccaggtcgacagcagg
ctctcgccgtacatcatcgacctccagtccatgcaccagttcagacaagacacaggaaca
atccgtccggtccggaggaccttctacgacccggcctccgccccgggtcagggctggcag
tgggagtgggagaacgacgcgggaacctggacgccgtacgacatggaggtggccatcgcc
atcgagagcgcccacagccgccagcagacctgcctggacctgacgccgctcggcttctgc
tacctcatcgactttaagaacatgacgcaggtgaaccggcagagccagcggtgtcggcgg
atccagcgccgcgccgacctggcctacccgctggtgtccggcccgctgcccgtccccaaa
ggaggcgcggtgggaggaggggggggcctgacgggggccctgctgggcgtcggggtgtct
ggggccagcatgggggtgggaggccccgtcacctctaacggcggcctgccggttctgggt
ctgggccagccgtgttcctgccagcagtgcttgctggtcctgagcgtgaagagcggtgca
ggaggagcaggaggcggcgcggcggccatccagactctgaacaggcgggctcttaccatg
cagcgccccaagaactccgccccccccgcgttgcggcccctcagcccatctaagtcggcc
accctggggcggggcctgcagcagagccccgcctactaccagacgctgccccacggtctc
gccatcaccaagaacacggcgtcgccgcggaggaacgcccagctgttcgcccagtcgctg
gccgccctcaccgccggcgcctcctccatgggtctctcagcgccttccagcaggccgccg
ccgccagcgctgccgccaccgcagccgccagcctccaaccagaacccgccctccattccg
cccaagctctcctcctcctcttcctcagccacagaaccagtaccgaccgccacgctgatc
acccccgccagcgctgtcaccacgcccccctccccggtgccgtctccatcgcctgtggtg
atgaagccgcaacgcacaccatcgtcgacggcggcgtgccacgcccccttaccgcagcgc
tccagcttggccgggctgagcaggccggcgctgcagaggatcgccatggcgcagtccaga
gcgctgatagcctcaggcgttcccacagtgccagtgaagaacctgaacgggtccagcccg
gtccaccccgcgctggccgggatcaccgggatcctgatgagcgccgcggcgctgcccgtg
tgcctgacccggccgcccaagctggtgctgcaccccccaccggtcagcaagagcgacatc
aagccggtaccgggcttcaaccactcctgcaggaagaccaccaagaagcaggtccgcaaa
ggtaaaactccagaggaggttgtgaagaaatacctgcagaaagtaaaaagtcctccagag
gaggactgcaccatctgcatggagccacttgggggcccgtccgggtacaaaggtccgggc
gttggacccgtctccaaggcagagtcagtgggtcgcctcgcccagtgcggacaccagtac
cacttccagtgtctggtggcgatgtacaacaacggcaacaaggatggcagcctccagtgt
cccacctgtaagaccatctacggcgtgaagaccggcaaccagccggccgggaagatggag
taccacgtcatcccccactccttaccgggtcaccccgactgcaagagcatccgcatcatc
tacaacataccgccagggattcagggaccagagcaccctaacccggggaagcccttcact
gccagaggcttcccgcgacactgctacctcccagacagcgagaagggacgcaaggttctg
aggctgctgctggtggcgtgggaccgccggctcatcttctccgtcggaacgtccagcacc
acgggagaatccgacaccgtcatctggaacgaggtccaccacaagacggagttcgggtcc
aacctgacgggccacggattccctgacccgggtcacctggacaacgtgttggaggagctc
cgagctcagggcatcacagaggaagatgcactggtagagaagtga
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