Gambusia affinis (western mosquitofish): 122829027
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Entry
122829027 CDS
T07758
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122829027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122829027
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122829027
03012 Translation factors [BR:
gaf03012
]
122829027
04131 Membrane trafficking [BR:
gaf04131
]
122829027
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122829027
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122829027
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122829027
Translation factors [BR:
gaf03012
]
Eukaryotic type
Elongation factors
122829027
Membrane trafficking [BR:
gaf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122829027
Exosome [BR:
gaf04147
]
Exosomal proteins
Proteins found in most exosomes
122829027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
122829027
NCBI-ProteinID:
XP_043969126
LinkDB
All DBs
Position
LG04:15776653..15784250
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPVSGWNGDNMLEPSPNMTWFKGWKINRKDGSASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAAGFTSQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPTSGKITKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagctccacattaacattgtggttataggacatgtggactcagggaag
tccaccaccacaggccacctcatctacaaatgtgggggcattgacaaaagaacgattgag
aagtttgagaaggaagctgcagagatgggaaagggatcctttaaatatgcctgggttttg
gacaaactcaaggcagagcgtgaacgtggaatcaccattgacatctctctctggaagttt
gagacaagcaagtattatgtcaccatcattgacgctccgggacacagagacttcatcaag
aacatgatcactgggacatctcaggccgactgtgctgtgttgattgtggccgcgggcgtg
ggcgagtttgaagctggcatctcaaagaacggccagactcgtgagcatgccttacttgcc
tacactctgggagtgaagcagctcatcgtcggtgtcaacaagatggattcaacggagccc
aactacagccagaagcgctatgaagagattgtgaaggaagtcagtacttacatcaagaag
attgggtacaatcccgacaccgtggcttttgtacccgtctcaggctggaatggagacaac
atgttggagcccagtcctaatatgacctggtttaagggctggaagatcaatcgtaaagat
ggcagtgcctcaggcaccactctgctggaggctcttgatgccatccagcctccaacccga
cccactgacaagcctcttcgtctgcctctgcaggacgtttacaaaattggaggtattggt
actgtgcctgtgggtcgagtagaaacaggaatcctgaaacctggtatggtggtgactttt
gctcctgtcaatgtgaccactgaagtcaagtcagtggagatgcaccatgaggccctgagt
gaggcgctacctggagacaatgtgggctttaatgtcaagaacgtctctgtgaaagatatt
cgccgaggtaatgtggctggagatagcaggaacgacccaccacaagaggcagctggcttc
acctcccaggtgattatcctgaaccaccctggtcaaatcagtgctggctatgcccctgtg
ctcgactgccacactgcacatatcgcttgcaagtttgcagagctgaaggaaaagatagac
cgccgctctggaaagaagctggaggataacccgaagtttctcaaatccggagatgctgcc
attgtggatatgatcccaggcaagcccatgtgtgtggagagcttctctgagtacccaccg
cttggtcgttttgctgtccgagacatgcgtcaaacagtggcggtgggggtgataaaaggt
gtggaaaagaaagcccctacaagcggtaaaatcaccaaatctgcacagaaggcacagaag
accaaatga
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