Gambusia affinis (western mosquitofish): 122829063
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Entry
122829063 CDS
T07758
Symbol
pecam1b
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04148
Efferocytosis
gaf04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122829063 (pecam1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122829063 (pecam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gaf04090
]
122829063 (pecam1b)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122829063 (pecam1b)
04091 Lectins [BR:
gaf04091
]
122829063 (pecam1b)
CD molecules [BR:
gaf04090
]
Proteins
122829063 (pecam1b)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
122829063 (pecam1b)
Lectins [BR:
gaf04091
]
I-type lectins (Siglecs)
122829063 (pecam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
Ig_C17orf99
ig
I-set
C2-set_2
C1-set
Zwei_Ig_N
V-set_CD47
CAP-like_CFAP184
DUF6132
Motif
Other DBs
NCBI-GeneID:
122829063
NCBI-ProteinID:
XP_043969211
LinkDB
All DBs
Position
LG04:complement(16306427..16325711)
Genome browser
AA seq
725 aa
AA seq
DB search
MGLLPLLTSTLLFSWTTLNAATPALKITKVDLSIEPNATVKRDANVVLRCKAEVLAFGTE
ALNRVYAIYKDDIVIYNKTTSSSEDLLYRLPQARVSNNGKYKCKISIMGEVKASEAATLT
VEGMSEPKLRLNKVNITEGESVTATCLTSEETGSLWFSFYDNSKEVENARVTSNELTFVP
KGVGIHIIHCSYLVLVLPNSFRSQKSNTVTLTVEELSIEPVLKISPQDNVYEGDTLNITC
SVSNVTKDHQAGELFLSQDTELLKSGRTSIHVNWTAHARTPMLTIKCLLYLRDVEKVVNK
TVSVSELFSVPTLKMSALEVFQGDEISLTCRSEKLSYDRLEGESLIYSLEPFDYHMVRKG
NGVFVGKAKTIDFNYTCTAAAKGIKKKSNVLTIRPKVPVSTPQIWVSGTAILGRKVEIFC
QSGTGTPPITYTLWKANKQHQITVVHEFNKAANFTIVINEPGGLNHYLCTASNGERKPEL
SDKLQTPVIEPMTEAYLMVVPDLNDISEGHTVILICSFLGTPPVTVRWLRDSDDLNPLKT
TTTNFNNTNYEFVVNKEHTDNYYCQAENRANSVESNKINLVVGMAMWKKLLIPGTVILVV
SSLVMVGFILFTRSRRVRVDRTPESVWSSRKPDAEIDNDSSTLSNEPEVEYTEVVHPRSS
DPTKNPLRKGTETVYSELQNSPHGAADHHDYGSVKYVDLNGDQQPGITQHSPKDISYSDL
PMPVD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcctgccactgctcacctccacgctcctgttcagctggacaactttgaatgca
gccaccccagctttaaaaataacgaaagtggacctgtccatcgagcccaatgctactgtg
aagagagacgccaacgtggttttgagatgcaaggccgaggttctggccttcgggacggag
gcactgaatcgtgtgtacgccatatacaaagatgacattgtaatctacaacaagacaacc
agctcctctgaggatttgctctaccgcctgcctcaggccagagtctccaacaatggcaag
tacaagtgcaagataagcatcatgggagaggtgaaggccagtgaagctgcaacactcaca
gtggaaggcatgtcagagcccaaactccgcctcaacaaagttaatatcaccgagggggaa
tcagtaacagccacatgtttaacatcagaagagacgggttccctttggttcagcttctat
gataactccaaggaagtcgaaaatgccagggtgacctccaacgaactcacgtttgtccct
aaaggcgtcgggatccacattattcactgctcctacttggtccttgtcttgccaaactca
ttcaggtcccaaaaaagcaacacagtcactcttaccgttgaagaactttccatcgaacca
gtcctgaagatttcccctcaggataacgtctacgaaggtgacactctcaacatcacttgc
tcggttagtaatgttacgaaggaccaccaagctggagagctcttcctgagtcaggacacc
gaactactcaagagtggaagaacatctatccatgttaactggactgcacatgcaagaacc
ccaatgcttaccattaaatgcctgctgtatctgagagatgtagaaaaagtcgtcaacaag
acagtttcagtgagcgagctgttctccgtgcccactctcaagatgtctgctctcgaagtc
ttccaaggcgatgaaattagtctgacatgcagaagtgagaaactgtcttatgatagactt
gaaggagaatccctcatttacagtcttgaaccttttgactaccatatggttcgaaaaggg
aacggagtattcgttggtaaagccaagacaattgatttcaactatacatgtacagctgct
gcaaagggcatcaagaagaagagcaatgtgctgacaattcgtcctaaagttcctgtctcg
actccacagatctgggtctctggcactgcaatcctcgggaggaaagttgaaatcttctgt
cagtcaggcacaggcaccccacccattacatacaccctgtggaaggctaacaaacaacac
caaattaccgttgttcatgagttcaataaagctgctaactttacaatcgtcatcaatgaa
cctggcggactaaaccactacctttgcacagcaagtaatggggagaggaagcctgaacta
agcgacaaacttcaaacacctgtcattgagccaatgactgaagcatatctgatggtcgtt
cctgacctcaatgacatttccgaaggacatacggtcatcctcatttgttctttcttgggc
accccacctgtaacagtgaggtggctccgggacagcgacgacctaaatccactgaagacc
acaaccacaaattttaacaacacaaactacgaattcgttgtgaataaggaacacaccgac
aattactactgccaggctgagaaccgagccaactctgttgaaagtaataaaatcaactta
gtagtcggcatggccatgtggaagaaattgctgattcccgggaccgtaatactggtggtg
tcctcactcgtgatggtgggctttattctcttcacaagatccaggagagtgagagtggac
agaactccagagagcgtatggagcagcaggaagcctgacgcagagattgacaatgatagc
agcacgttgtccaacgagccagaagtggagtacacggaggtggtgcatccacgctcatca
gatcctacgaaaaaccctcttagaaaaggcacagaaacagtttacagcgagctccaaaac
tctccccatggtgctgctgaccatcatgactatggttcagtaaagtatgttgatctgaat
ggagaccaacaacctgggatcacgcagcacagtcctaaagatatcagctactcagatctg
ccgatgcctgtggattaa
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integrated database retrieval system
