Gambusia affinis (western mosquitofish): 122829121
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Entry
122829121 CDS
T07758
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122829121 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122829121 (herc3)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122829121 (herc3)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
HECT type E3
122829121 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
122829121
NCBI-ProteinID:
XP_043969333
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All DBs
Position
LG04:2996283..3025048
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AA seq
1049 aa
AA seq
DB search
MLCWGNARDGQLGIGAERNPAFEPRSCHVFSGRGLKEVACGGQHTLFLLHDGSVYTCGSH
SCGQLGHNRDGTSPELVGALDTQKITMVSCGRAHSMAINEQGQVFAWGAGEGGQLGLGTV
EVAVRIPRLVKRLCDHSISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLTP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVSQIAC
GRHHTLALVPSSSMVYAFGCNSHGQLGTGILGDSRSPFPVKSSFLTGNLQRRDSKQYTVV
KIICGGDHSFLLYSNEQSSAATEDFRVVNVSRSLAPINYEQLNSWRLKMMYNTDSAVAND
IVIQLSSTACWNASFLDQSDDTHFKTNPKIPGIDLNSVRTLFEVLSKPAFSGLLEQASKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFMDGSFFTRMVDMYKRIVVFMLTGGKTILVPVFYDNYFLATLQLLEKLHKVNLRAN
HVEYSRFYIPDISSLVDIQEDYLKWFLTKAEIKMDSSPSQQNDFPSVNLCAFPFILNAQA
KTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTM
YSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLDPVYGMFTHYKDSNLLWFSDKC
FVEQNWFHLIGIVCGLAIYNSTVVDLHFPLALYKKLLDVSPSLDDFKELSPTEARSLQQL
LDYEGGDVEETFLLSFAITRENYGMTEIKELVPGGESIAVDKNNRKEFVEAYLRYVFSDS
VSEQYSAFSAGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNTVYKGEYTATHPT
VRLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNL
LDMPRYQTKETLRRRLTQAVEQYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggaaatgccagggatgggcagctgggcatcggcgcggagagaaaccca
gcgtttgagcccaggagctgccatgtgttcagcgggcggggactgaaggaggtcgcgtgc
ggagggcagcacacgctgttcctgctgcacgacggcagcgtttacacgtgtggctcccac
agctgcggacagctgggccacaacagagatgggacgtccccagagctggttggggctctg
gacacccagaagataacgatggtgtcgtgtggccgggcgcattcgatggccatcaatgag
cagggtcaggtgttcgcatggggagccggagaaggcgggcagctcggcctcgggacagtg
gaggtggccgttcgaatcccgaggttggtcaaaaggctttgtgaccacagcatctcccaa
gtgatgtgtgggaaccagcactgtatcgcactttctagagatggtcagctcttcacttgg
ggtcagaacaccagcggccagttgggtctgggtaaaggagagccaagcaaactgacgcct
catcccctgaagtccttggcagggattcctctggctcagataactgctggaggagaccac
agttttgccctctccctttcaggagccgtctttggatggggcaaaaaccgggcggggcaa
cttggactgaatgacaaacaagatcgagccgtcccgtgtcacatcaagtttctgagatca
caaaaagtcgtttatattagctgtggagatgagcacaccgcagccctcacaaaggacgga
gggctgtttacgtttggcgacggctcatggggtcagctgggtcacggctccaccaacaat
gagcttctaccgaggcgagttctggagctgatgggcactgaggtttcccagatcgcctgt
ggcaggcaccacactctggccttagtcccgtcgtccagcatggtttatgcatttggctgc
aacagccacggccagctgggaacgggaatcctgggggattcaagaagcccgtttcccgtc
aagtccagcttcctgactggaaacctgcagagaagagattcaaagcaatacacagttgta
aaaatcatatgtggaggagaccacagtttcttattgtactccaacgaacagagttctgct
gccacagaggacttcagagtggttaatgtcagtagaagcctcgccccaatcaactacgaa
cagttaaactcatggagattaaaaatgatgtacaacacagactctgctgttgcaaatgac
attgtgatccagctctcctccacagcctgttggaacgccagcttcctggaccaaagtgat
gacactcacttcaagaccaacccaaagatcccgggtatcgatctcaactcggtcagaacg
ctgtttgaggttctcagtaaaccggccttctctggactcctggaacaggcctccaagagt
tttgagagcctgctgatcccccagctaccccgctcgccgccagacgttgaggccatgagg
atctacctcatcttgtccgagtaccccgccctgcaggactccaagaactacatccgcctc
actattcccctggcaatggctattctccggctagacgccaaccccagcaaagtattggat
aactggtggtgctttatggacggcagcttcttcaccagaatggtcgacatgtacaaacgc
atcgttgtgttcatgctgacgggcggcaagacgatcctggtgcccgtcttctacgataac
tacttcctggcgacgctgcagctgctggagaaactccacaaggtaaacttaagggcgaat
cacgtggagtacagccgcttttacatcccagacatcagcagcctggtggacatccaggag
gactacctcaaatggtttctgactaaagctgagattaaaatggactcctccccctcacag
cagaacgactttccctcagtgaacctctgtgccttcccgttcatcctgaacgcccaagcc
aagacgacaatgctgcaaacagatgctgaactgcaaatgcagatggccgtcagcggtgca
aacctgcacaacgtcttcatgctgctcacactggagccccaccttgctaggaacccatat
ctggtgctgcatgtgcgcaggaaccatttagtcagtgacacgctgcgggagctcaccatg
tactctgacgtggatctcaagaagcccctcaaggtgatctttgatggcgaggaagccgta
gacgcaggcggcgtgactaaagagttcttcctgctgctgctaaaggagcttctggatcct
gtttatgggatgttcacccattataaagactccaacctgctgtggttctctgacaaatgt
tttgtggagcagaactggtttcatctgatcgggatcgtctgcggtctggccatctataac
tccactgtggtggatctgcactttcctctggcgctctataagaagctgctggacgtgtcg
ccttcactggacgatttcaaagagctctctccaacagaagccaggagtcttcagcaactt
ctagactatgaaggaggagacgtagaagagacgtttcttctcagctttgctatcaccagg
gaaaactacgggatgacagaaatcaaggagctggttcctggaggagagagcatcgctgtg
gacaaaaacaacaggaaggagtttgtggaggcctacctgcgctacgtgttctccgactcg
gtgagcgaacagtactcggccttctctgccggcttcctgaaagtgtgcggcggggagatc
ctgtcgctgttccagccctctgagctgatggccatggtggtcgggaacaacaattacaac
tgggaggagatggaaaagaacaccgtttacaaaggggagtatactgccactcacccgaca
gtccggcttttctgggaggttttccacgaattcccgctggagaagaagaagcagttcttg
ttgttcctgacgggaagcgaccgcatccccatccacggcatggagagcctccgcatcgtc
atccagtccaccacggcggaggaacactacctgcccgtggctcacacctgctacaacctg
ctggacatgccgcgctaccagaccaaagagacgctgcgccgccgcctgactcaggctgtg
gagcagtacgagggcttcagcctggtctga
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