Gambusia affinis (western mosquitofish): 122829242
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Entry
122829242 CDS
T07758
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122829242 (ddx17)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122829242 (ddx17)
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122829242 (ddx17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122829242
NCBI-ProteinID:
XP_043969585
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Position
LG04:complement(19659794..19669088)
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AA seq
650 aa
AA seq
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MRGGSSYGDRDRDRDRGRDRPRFGGGMGGRSGPPPMKFGNPGERLRKKRWNLDELPKFEK
NFYTEHVEVQRMGQYDVEEFRRKKEITIRGSGCPNPVTAFHHAQFPQYVMDVLVQQNFKE
PTAIQAQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT
RELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRE
YIQINIGALELSANHNILQIVDVCMETEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDD
LTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINY
DYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVD
SSRGGGGGGRMRYRGGNSNNPNLMYQDECDRRMRSGGGGKDSRGGFNRDSRNNRDDDRSS
SSSYRDRNRDHRNNYNAGSDQYQNYNNGGGYNTRGGGPTGGGQEQPSQPQGQFGQGPPPP
PPPSGAPQPLMAQQFPPPPQPPLMGFMGQPPFPPFPAAPPPPPGPQPPRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggctcctcgtacggagacagggacagagacagagatcgtggacgagacaga
ccacggtttggagggggcatgggtggccgcagcggaccgccgcctatgaagtttggaaat
cctggtgagcgtctccgcaaaaagaggtggaacttagatgagttgccaaaatttgaaaag
aacttctacactgaacacgttgaagtccaacgcatgggtcagtatgatgtggaggagttt
cgcaggaagaaggagatcaccatcagaggctctggctgtccaaaccctgttactgctttt
caccacgctcagtttcctcagtatgtgatggacgtcctggtgcagcagaacttcaaggag
cccacagccatccaagcccagggtttccctgtggccttgagcggcaaggacatggtggga
atagcacaaactggctctgggaagacgctggcttacctccttcctgctattgtacatatc
aaccaccagccctacctggagagaggggatggccccatatgtctggtccttgcacccacc
agagagctggctcagcaggtccagcaggttgcctacgactacggcaagtcctcccgcatc
aagagcacctgcgtgtacggcggcgcacccaaaggcccacagattcgagaccttgagaga
ggcgttgagatctgcatcgccacgccgggtcgcctcattgacttcctggaggcggggaag
accaacctgcgccgctgcacttatttagtgctggacgaggccgaccgcatgttggatatg
ggctttgagccgcagattcgcaagattgttgaacaaatcagacctgacagacagaccctg
atgtggagtgcaacgtggccaaaagaggttcggcagcttgccgaggacttcttaagggaa
tacatccagattaacattggcgctctggagctcagtgccaaccataacattctgcagatc
gtcgacgtctgcatggagaccgaaaaagacaacaagcttattcagctgatggaggagata
atggctgagaaggagaacaaaaccatcatctttgtggagaccaaaaagagatgcgatgat
ctcacccggaggatgaggcgcgatggatggccagccatgtgtatccatggagacaagagc
cagccagaaagagactgggttctcactgaattcaggagcggcaaggccccgatcctgatc
gcgacagatgttgcctctaggggtctggatgtggaagacgtaaagttcgtcatcaactat
gactatcccagctcctctgaggattatgtccatcgtattgggcgcacagcccgcagtacc
aataagggcaccgcctacaccttcttcaccccgggaaacctgcgacaggccagagacctg
gtccgggttctggaggaagcccggcaggctataaacccaaaactgctccagctggtggac
tccagccgtggaggtggaggcggtggcaggatgcgttaccgtggcggcaactccaacaac
cctaatctaatgtatcaagacgagtgcgatcggcgcatgcgctccggcggaggcggcaaa
gacagccgcgggggcttcaaccgcgacagccgcaacaaccgcgacgacgaccgctcttcg
tcgtcctcctacagagacagaaaccgagatcacaggaacaactacaacgccggctcggat
cagtaccagaactacaacaacggcggaggctacaacacccgcggcggaggcccgaccggc
ggcggtcaggagcaacccagccaaccgcagggccagttcggccagggccctcctccaccc
cctccgccgtcaggcgccccgcagccgttgatggcacagcagtttcccccgccgccgcag
cccccacttatgggcttcatggggcagccacctttccctcctttccccgctgccccccct
ccaccgccaggcccacaaccaccccgtaaatag
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