Gambusia affinis (western mosquitofish): 122829270
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Entry
122829270 CDS
T07758
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03266
Virion - Herpesvirus
gaf04145
Phagosome
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04517
IgSF CAM signaling
gaf04518
Integrin signaling
gaf04810
Regulation of actin cytoskeleton
gaf04820
Cytoskeleton in muscle cells
gaf05100
Bacterial invasion of epithelial cells
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
122829270 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122829270 (itga5)
04517 IgSF CAM signaling
122829270 (itga5)
04518 Integrin signaling
122829270 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122829270 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122829270 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122829270 (itga5)
04810 Regulation of actin cytoskeleton
122829270 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122829270 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122829270 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122829270 (itga5)
04515 Cell adhesion molecules [BR:
gaf04515
]
122829270 (itga5)
04090 CD molecules [BR:
gaf04090
]
122829270 (itga5)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122829270 (itga5)
Cell adhesion molecules [BR:
gaf04515
]
Integrins
Integrin alpha subunits
122829270 (itga5)
CD molecules [BR:
gaf04090
]
Proteins
122829270 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Imm61
Motif
Other DBs
NCBI-GeneID:
122829270
NCBI-ProteinID:
XP_043969640
LinkDB
All DBs
Position
LG01:36112810..36163270
Genome browser
AA seq
1059 aa
AA seq
DB search
MGSKRSRVKTPGTATFVVRSSLCIIGLLATFSRPACEAFNLDVENPVVYSGPEGSYFGYA
VDFYLSESASASVVIGAPKANTSQTNITEGGSVFYCPWSVGQSNCHTIEFDPEGDRSSLI
NGTIQQVDFKSHQWFGATVRSHGDTILACAPLYYWRTEKEEAYSDATGTCYLSIQNFTKF
VEYAPCRTELSDRGGQGYCQGGFSADFTKDGRVVLGGPGSYYWQGQVISAAKKDIIKAYY
PGYFMQAVKGQVQTRQIQASHDDSYQGYSVAVGEFSGDQVEDFVTGIPKGHLLYGLVSIL
NGSDLNTLGNFTGEQMGSYFGYALATTDINSDGMIDLLVGAPMFMVRTSGGRLEEMGRVY
IYLQRSPLHLEITKPSLTGKEVFGRFGSTIAPLGDLNQDGFNDVAVSCPFGGDDRRGLVY
IYNGYSEGLREKPSQVIAGQWAAGALPASFGFSLRGAQDLDMNGYPDLIVGAFGVNKAVL
YRSRPIVSTVASLVVSPTMINPEEKSCVITSGNSSILVSCVNLSYCISAEGKHLPANLDF
QVEVQLDSQKHKQKGAVRRALFLDSQQPLLQKRVRVRHGDRVCDQTRIYLRDEKEFRDKL
SSIFVALNFSLDPEAASDSHGLRPILNYQTTNVIEQKAQILLDCGEDNICVPDLKLAVHS
DRKEVYLGDDNSLTLTFNARNEGEGGAYEAELYVALPPDADYSGIARNNESLTQLTCSYD
TENQTRYLSCDLGNPMKAGTNLWAGLRFTVPRLKDTHKTVQFYLQIRSKNENNSQSEVVY
YNPEVVVQADVILQGVSRPDKVFFPPANWKVPKSYGVEQDVGPAVEHIYELVNNGPSRIS
DTLLELHCPLRIQGHDLLYPLEFYTEGPINCTADKNLNHRNLKLQRSSTESPVLALKADE
HHVERRDVHKNSLAHLTNLSCSNADCWMLQCNVGLLEKGTTAILKMRSRVWAETFTEKAY
KQYIMECLGRFNVKKMPYSILPKHYPSGQKKVVTPVVWNKPDIENSVPLWIIVLAILAGL
LLLALLIYVLYRLGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgaagcgatcacgcgtaaagacgccggggaccgcaacctttgtcgtccgctcg
tccctctgtatcatcgggcttttggccactttctctcggcctgcgtgcgaggcgttcaac
ctggacgtggagaacccagttgtttatagcggacctgaggggagctacttcggatatgcc
gttgacttttatttgtctgaatcagccagtgcaagtgtggttattggagccccgaaggcc
aacacgagccagactaacattactgagggagggtctgtgttctactgtccatggagcgtt
ggccaatcgaactgtcacaccattgaattcgatccagaaggagatcgcagttccctgatc
aatggcacaattcagcaggttgatttcaaatcccaccagtggtttggcgccacagtgcgt
tctcacggtgacacaattttggcttgcgcccctctttattactggcggactgaaaaggag
gaagcctattctgatgccacaggaacctgctacctctcgattcagaacttcaccaaattt
gtggagtatgctccctgtcggacagaacttagcgatcggggaggacaaggttactgtcag
ggaggattcagtgctgactttacaaaggatggcagagtggttctgggaggacctggcagc
tactactggcagggccaggtgatctctgcagctaagaaagacatcatcaaagcctactat
ccaggctattttatgcaggcagtaaagggtcaagtacagaccagacagattcaggcttca
catgatgacagctaccaaggttactctgttgctgttggggaatttagtggtgatcaggtg
gaagattttgttactgggattccgaaggggcatcttctttatggtttggtgtccattttg
aacggttcagatctgaacaccttgggaaacttcactggggagcagatgggctcatatttt
ggctatgcactggcaacgactgacatcaacagtgatgggatgattgatctgttggtggga
gcgcccatgttcatggtccggacctctggtggtcgtctggaagagatgggtcgggtctac
atttacctgcaacgcagtccgttacacctggagatcaccaaacccagcctgacaggcaag
gaggtgtttgggagatttggcagcaccatcgcaccactgggagacttgaaccaggatggt
tttaatgatgtggctgtaagttgtccattcggaggtgatgatcgccggggactggtctac
atctacaacggatactctgaaggcctcagggaaaagccttctcaggtgattgcaggccaa
tgggctgctggtgctcttcctgctagctttgggttttccctcagaggagctcaagacctg
gacatgaatggataccctgacctcattgttggagcttttggtgtaaataaggcagttctc
tataggtcgcggccaattgtcagcactgtcgcctcccttgtagtttccccaacgatgatc
aaccctgaggagaagagctgtgtgatcaccagtggaaactccagcatccttgtttcctgc
gtcaatctgagttactgcatatctgctgaagggaaacacctaccggccaatctagacttc
caggtggaggtgcagctcgacagccagaagcacaagcagaaaggtgctgtgaggagggct
ctgttcctggattcccagcagcctttgctccagaaacgtgtcagggttcgccatggggat
cgtgtgtgtgaccaaacaagaatctacctaagagatgagaaagaattcagggataaactc
tcctccatttttgtggccttgaacttcagcttggacccagaagctgcctctgactcccat
ggcctgcggcccatcctcaactaccagaccaccaatgttatagagcagaaggctcagatt
ctgttggactgcggagaggacaacatttgcgttcctgatttgaagctggcagtccacagc
gacaggaaggaagtctacctcggcgatgacaactcgctgaccttaactttcaacgccagg
aacgaaggagagggaggggcgtacgaggcagagctgtatgtggcattgcccccggacgca
gattacagcggcattgcccgtaataatgagagcctcacccaactcacctgcagctacgac
accgagaaccagacccgatacctcagctgtgatctgggaaacccaatgaaggccggtacc
aatctttgggcgggtctgcgatttacagtacctcgtctgaaggacacacacaaaactgtc
cagttttacctccagatacgcagtaaaaatgaaaataactcccaaagtgaggttgtttac
tacaaccccgaggtggtggtccaggctgatgtcatcctgcagggtgtgtctcggccagat
aaggtcttctttcccccggccaactggaaagtgcccaaaagctacggggtggaacaggac
gtcgggccggccgtggaacacatttatgagctcgtcaacaacggccccagtcggattagc
gacaccctgctggagctgcactgccctcttcgcatccagggtcacgatctcctttaccct
ctcgagttctacacagaaggtcccatcaactgcacggcggacaaaaacctgaaccaccgt
aatctcaaactccagcgctcatcgacagagtctcctgttctggcactgaaggctgatgag
catcatgttgagaggagagacgtccacaagaactcgcttgctcatctgaccaacctgtct
tgctctaatgcggattgctggatgctccagtgcaacgttggactgctggagaagggaacc
actgcgatcctgaaaatgcgctcgcgcgtctgggccgagaccttcactgagaaagcttac
aagcaatacataatggagtgtctgggcagattcaacgtaaagaagatgccgtattccatc
ctacctaaacactatccgagtggtcagaaaaaggtggtgaccccagtggtttggaacaag
ccagatattgagaactcggtccctctgtggatcatcgtcttggccatcctggccggttta
ctgctgctggctcttcttatctacgtcctttacaggcttggcttcttcaagcgttctcta
ccttacggcacagccatggaaaaagctcaactcaaaccacaggctgcctctgaggcctaa
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integrated database retrieval system
