Gambusia affinis (western mosquitofish): 122829374
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Entry
122829374 CDS
T07758
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
gaf04137
Mitophagy - animal
gaf04144
Endocytosis
gaf04340
Hedgehog signaling pathway
gaf04350
TGF-beta signaling pathway
gaf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122829374
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122829374
04350 TGF-beta signaling pathway
122829374
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122829374
04137 Mitophagy - animal
122829374
09144 Cellular community - eukaryotes
04520 Adherens junction
122829374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122829374
04121 Ubiquitin system [BR:
gaf04121
]
122829374
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122829374
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122829374
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122829374
Autophagy
Mitophagy
Other mitophagy associated proteins
122829374
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
HECT type E3
122829374
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122829374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
122829374
NCBI-ProteinID:
XP_043969799
LinkDB
All DBs
Position
LG04:complement(25289049..25346479)
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNRL
GPNDNDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVVTPVNGAVASGPPGEQRVQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNSPSSNGSREAPDSQNTNL
SHPPQLKDQGGPGVPPQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIP
VTEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKI
DIADWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagtaaggagaaatggcccagtaaagctgcggttgacagtcctctgt
gcaaaaaacctggcaaagaaagacttctttcggttgccggatccttttgctaaagtggta
gtggacggttctggacaatgccactcaacagatactgtgagaaatactcttgatccaaag
tggaatcaacattatgatctctacatcggaaagtcagactccattaccatcagtgtctgg
aatcacaagaagatccacaaaaagcagggcgcgggattcctcggctgcgtccggctcctg
tccaacgccatcaacagactcaaagacacgggctatcagagactggacctgaataggctg
ggccccaacgacaacgacaccgtaagaggacagatagtagtgagtcttcagtccagagat
cgaatcggatccgggggaccagtggtagactgcagccgcctgtttgacaacgatttgccc
gacggctgggaagagaggaggacagcatctgggaggatacagtacctgaaccacatcacc
cgcaccacgcaatgggagagacccaccaggccggcgtcggagtactccagcccatcgggg
cgtccgctgagctgcgtggtggacgaaaacacgccggtggtgactcctgtcaacggggcc
gtggccagcggacctccgggcgaacagcgcgtccaggagcggcgggttcgatcgcagcgg
catcggaactacatgagtcggacacacctgcatacgccgcccgatctgcctgagggctac
gaacaaagaaccacccagcagggccaggtgtatttcctccacacacagaccggagtcagc
acctggcacgacccccgagtgcccagggacttaagcaatgtgaactgtgaggagctgggg
ccactgcctccaggctgggagatcaggaacaccgccaccggccgcgtctactttgttgac
cacaacaatcgaacgacacagttcacagatccacgactgtctgccaacctgcatctagtg
ctcaacagcccgagttcaaatggttcccgcgaggccccggacagccaaaacactaacctc
agtcatccaccacagctaaaggaccagggtggtcccggagtccctccgcaggctctgtct
cctgctcagctgccggaagaggcggagtgtctgacggtgcccaagtacaagagagacctg
gtgcagaagctgaagatcctccggcaggagctctcacagcagcagccgcaagccggccac
tgccgcatcgaggtcagccgggaggagatcttcgaggagtcgtatcgacaagtgatgaag
atgcgtccgaaggatctttggaaaagactgatgataaaattcagaggagaagagggactg
gactatggaggagtcgctcgggaatggttatacctgctgtcgcacgagatgttgaaccca
tattacggcttgttccagtactccagagacgacatctacaccctacagattaacccagac
tctgctgtcaacccagaacacctgtcgtacttccactttgtgggccgcatcatgggcatg
gcggtgtttcacggccactacatcgacggaggcttcacgttgccgttttacaaacagctg
cttgggaaaccaatcacgctggacgacatggagtctgtcgaccccgacctccacaacagc
ctcgtctggatcctggacaatgacatcactggggtcctggaccacaccttctgcgtggag
cacaacgcttacggagaaatcatcccgcatgagctgaagcccaacgggaagagcatcccg
gtgacggaggacaccaagaaggagtatgtcaggctctacgtgaactggcgtttcctccat
ggcatcgaggctcagtttctggctctccagaagggcttcaacgaggtcatcccacagcac
ctgctcaaggccttcgacgagaaggaattggagctgatcgtgtgcggcctggggaagatc
gacatcgccgactggaagtccaacactcggctgaagcactgcaccccagacagcaacatc
gtcaagtggttctggaaagccgtggagtcgttcgacgaggagaggagggcccggctgctg
cagtttgttactggctcgtccagagtcccgctgcagggcttcaaggctttacagggtgca
gcaggacccagactcttcaccattcatcagattgatgccaacgccaataatctgcccaaa
gcgcacacctgcttcaaccggatcgacattcctccctacgagagctacgacaaactgtac
gacaagctactgacggcgatcgaggagacgtgcggcttcgcggtggagtga
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