KEGG   Gambusia affinis (western mosquitofish): 122829406
Entry
122829406         CDS       T07758                                 
Symbol
aptx
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122829406 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122829406 (aptx)
Enzymes [BR:gaf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     122829406 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     122829406 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     122829406 (aptx)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     122829406 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     122829406 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_6 FHA zf-C2H2_4 zf-C2H2 zf-met Copper-bind zf-C2H2_jaz
Other DBs
NCBI-GeneID: 122829406
NCBI-ProteinID: XP_043969870
LinkDB
Position
LG04:complement(14716346..14719109)
AA seq 333 aa
MPICWLVSEEGTHKPIPLPHLRAVVVGRGPETTIKDKKCSRQQVELKAECNKGYVKVKQL
GLNPTSVDCVVVGKGNEVRIKPGQKLHIVNQLYPYTIQFKEDLSGHHSSIKSPREKTSKN
SDGQKNVQTLKAPKQNTNGSPSVCRAENTKTNENVGHWSQGLKTSMQDPQMQVYKDDKVV
VITDKYPKARYHWLVLPWQSIPSLKALRGEHCDLLKHMQQVADRMIQQCPDSSTLRFRSG
YHAIPSMSHIHLHVISQDFDSPCLKNKKHWNSFTTEYFIDSDDVIQMLETCGKVTVKEGS
SELLKLPLRCHVCHKEFPTIPSLKDHLKSHFPR
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgcctatttgctggcttgtcagtgaagagggtacccataaaccaatcccgttacctcat
ttacgtgcggttgttgttgggcgaggcccagaaacgacaattaaagacaagaaatgctct
cggcagcaagttgaactgaaagctgaatgcaacaaaggttatgtcaaagttaaacaactg
ggcttaaaccccacctcagtagactgtgtggtggtggggaaaggcaatgaggtcagaata
aaacctggacagaagctccacattgtcaatcagctttacccctacaccatacagttcaaa
gaagatctctctgggcaccacagcagcatcaaaagtccaagagagaaaacatcgaagaac
agtgatggccagaaaaatgttcagactctaaaagctcctaaacagaacacaaatggctct
ccatcagtatgtcgtgcagaaaacacaaaaacaaatgaaaatgtcggacattggagccaa
ggtctgaaaacttcaatgcaagatcctcagatgcaggtttacaaggatgataaggttgtt
gtgattacagacaagtaccccaaagctcgctaccactggctagtccttccatggcagtcg
attcccagcctgaaggctttacgtggagagcactgtgatcttctcaaacacatgcagcag
gttgctgaccgcatgatccagcaatgtccagattccagcacactgcggttccggtcaggt
taccacgctatcccaagtatgagtcacatccatctccatgtgatcagccaggactttgac
tctccttgcttgaagaacaagaagcactggaactctttcacaacagagtatttcattgat
tctgatgatgttattcagatgcttgagacatgtggaaaagtcactgttaaagaaggttcc
agtgaattgttgaaactacctctccgctgccatgtgtgccacaaagagtttcctacaata
ccttctctgaaggaccacttgaaatctcactttcccagataa

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