Gambusia affinis (western mosquitofish): 122829481
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Entry
122829481 CDS
T07758
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
122829481 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
122829481
NCBI-ProteinID:
XP_043969996
LinkDB
All DBs
Position
LG04:complement(3593254..3630500)
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AA seq
3138 aa
AA seq
DB search
MAGCMQSSQLCKKWAFLRCLLLTLCLSSCLISVFSEPFDPSHLYYHKSGPNEDDIIIANN
GIRVPFGRSVFLDPVKDLITEVQPGDRCQITVLDNDPLTQKPGMLTPKRFPCSFGANEVK
YTHFGSRSPSKDRVKMQLRYDSHTDTVIVPFMLEVEVVFQQLEILLRNMPLNVEKLNGDS
SLIDKKALEFSFEDGVTQCKITTLVGAGGLPRYGMLLNSPPNGQLVDCNEFVNLGIHYKH
TAKTKSPNRDYIPMMVELQDIEGNTIMQEHFQTMVRIKEGAENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDVESDPDNLIFNITSPLSPQQGYIISTDDQNLPITSFNQRDIRNLK
IAYKPPSEDSDQERIFQLEFEIVDTDGAVSDPFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSSQNLEISDEDNLEDVRITVVDGLKHGDLTVLGVRRKFFTPSDLEAGIVVYQHD
GSDTYSDNIILRMTDGRNEVEFLFPITIVPTDDEPPIINANTGLVLFKKEMMQISPFILS
ATDIDSEDSFIRFILEAPYSTVGELLLRQVEPPADPSQWKFSETDEMFEQVVTEWSQKDI
LDGKLFYQHIGPHSTTTVTDLLVFRVQDDNDPPNQSGEHTFTIKILPVDDLPPVLFPGTT
LHMTVQEYELTFFRKKFLCFTDLDSDDRDLKYTITKVPTDTDENNLAPLGKIVLTDSPDT
VITEFTQAQVNHHKVAYKPPDQELGITPKVAQFTFIVEDTAGNSADGLFTIFLQPVDNKP
PEIINTGFTVKETSTFIISSKELYATDTDTDDENIIFTLIQAPKYGQLQYLGIYMSNGET
FNLEDIANGLLTYLHGGEESLSDVIKLSLSDGFHEVPITLRVTIEPVDDETPTIMLPAGV
LGAAIDVLENGATEITSNVIQGRDKDTDDLMLAFIVEEPPRLGEIIVNGAPAERFTQEDI
INGVVVYAHTSGEIGPVKVHDSFNLTLSDMSDQWVVGGNKVQGVTVHVTILPVDSIPPVV
SVGGQFVVMEGEKNVITISHIQAEDVDTNNDDILCTIIVQPTSGYVENISPATGSEKSRA
GTAITAFTIKDILLGHIYYVQSIHKGVEPVEDQFTFRCSDGINFSERHFLNIVIIPANDE
KPEIFTREFVVMEGMNLVIDTPFLNAADADIPEDELFFEIIKNPKHGAIIQQLNTGTVPV
ERFSLEQIKEAANIVYEHDDSETKEDSFDIRLSDGKHVVEKTVLIIVIPVDDETPRMAVN
DGLDVEIGETKVISNRALKATDLDSEDRELTYVLKYGPGQGYLQRINKFGNVLGNITLGM
NFTQDEIDKHRILYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGKVTLTTDLLSTSDINSPDEYLSFSITRAPSRGHLECTDLPGVPISTFTQLQLA
GNKIYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVVTVHKLVVEEGET
KLITPFELTAEDRDTPNNLLRFTVTQVPVHGQLLFNNSRPITSFTKQDLNENLISYKHDG
TETNEDSFSFIVTDGTHTDFYVFPDTVYATRKPQMMTIHINTVDNGVPQIVVNKAAASLR
VLQTGHLGFVFTSKVLRSEDRDSPQKVLKYSVSEEPLHGFIMNVELGNHSINTFTQAEIN
DMKICYVLLDGSNATSDIFYFTVEDNGGNKLKPQPFRLNWAWISLEREYYVVDEDAKFLE
VTLKRRGFLGETSFVSIGTKDGSAEKDKDFRGKAQKQVQFNPGQTTASWRVKIFTDQEFE
TSETFEIQLSDPVMAVLEYPDAATVEIVDPGDESTVFIPQAEFKIEEDIGELLVPVMRSG
DASQELMVVCFTQQGTATGTIPTTVLSYSDYITRAEDHTSVLRFDKDEREKVCRIIIIDD
SLYEEEESFNVSLSMPMGGQLGASFPSAKVTILADSDDEPSLYFEEPEYVVEESSGYVEV
KVWRTGTDLSKIATVTVRSRKSDPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPKLEGPETFDLVLRMPMNAVLGEPSKTTITINDTVTDLPKVQFKEGSYKVDESDGEVTA
MVYRSGDISLRSTVRCYTRQGSAQVMMDYSERPNTDASIITFLPGESEKPCVVGLMDDSV
HEEDEEFRLVLGSPKSKSPYGASIGEQKDALVTITDEKDKPIIRFSEIKYSVREPQVKGE
VARVKIPILRFGDASKLSVVRVHTKDGSATSGEDYNPLSEDVEFKEGEKEHFVEIEILYD
GHREMREAFTVHMKPDDNMVAEIQMNKAIVYIEEMDSVADVTFPAVPHVVSLLMYDDTAK
TRDRPSPPNGYPVVCVTACNPKYQDFDKTGSICSAENINDTLTQYRWLISAPTGPDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRVQCAARAFNTNGDAGLELSSPIFVISTEEGM
CQPRIPGTVGAEPFSAKIRYTGPNDPDFPNLIKLTINMPHMDGMLPVISTRPLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGYGFITDATKNPEIIGETSPYQYSTAMRSANSLRFYR
NLNLEACLWEFTSYYDMSELLNDCGGSIGTDGQVLNLVQSFVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHPGTSVSSMVMCADIPGLTFTLALVRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKLVPCIASPNGEFSIPPVCHPREPLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
KELWLSDGSMGFGEGTDAAFSEGSTIYGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTNREYGCLADAPSLLYRFKILDKAQPETQASAFGDVAFKAKLAHDAPGAQTLVTQP
GSDGFMLSSSPLFQVAAGREWFIHTIYTLRSRENANRHIGKRSVEYLQHSVSSVAQPQVS
NGRQRRAAPALSGPALVQDIGIKNNRGTNIQHIALDRSDRMVVSQRQPWSPSGDRLLERP
LLESSGREPADTSFLPMLVGIVGLILLICLIAIVVILLLRRKRKEKEAQFPPYTTSSSSA
YSGYRPTGMWSSSDSSEV
NT seq
9417 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtatgcaaagttcccaactttgcaaaaagtgggcatttcttagatgcctg
cttttgactctgtgtctcagttcatgtcttatttcagtattttctgagccctttgatccc
agtcacctctattaccacaagtctggacctaatgaagacgacatcatcatcgctaataat
gggatcagggtgccgttcgggagatcagtgtttttggaccctgtgaaagacctgattaca
gaagtgcagcccggcgaccgctgccaaataacagttttggacaatgacccactgacccag
aaacctgggatgctgaccccgaaaaggtttccctgttcatttggagcaaacgaagtgaaa
tacactcactttggatctcggagccccagcaaggaccgtgtaaagatgcagcttcgctat
gattcccacacagatacggttatcgtcccattcatgttagaagtggaggtggttttccag
cagctcgagatcctcctcaggaatatgcctcttaatgtggagaaactcaatggggacagc
agcctgattgacaaaaaggctctggagttttcctttgaggatggggtcacgcagtgtaag
atcaccacgctggttggcgccggaggcctccccaggtatggcatgcttttgaatagcccc
cccaatggccaactggttgattgtaatgagtttgtaaatctgggtattcattacaaacac
actgctaaaaccaaatcaccaaacagagactatattccaatgatggtagagctgcaggat
attgagggcaacacaataatgcaggagcacttccaaacaatggtcaggatcaaagaaggt
gcagaaaacactgctcctaaacccagctttgtagcaatgatgatgatggaggttgatcag
tttgtgatgacggctattacaagcgacatgctggcagctgaagatgttgaatctgaccca
gacaatttgattttcaacattacttcacctctgagccctcagcagggttacataatcagc
acagatgatcagaatctccccatcacttccttcaaccagagggacatcagaaatttgaaa
atagcatacaagcctccctcagaggactcagatcaagagaggattttccaattagagttt
gaaattgtagatactgatggcgcagtgtctgacccatttgcttttatgatagtggtgaaa
cctatgaacaccttagctccggttgcaaccaaaaatacaggtcagctactgtttgaaggc
caatcccgagctctttccagctcccagaatttggaaatcagtgatgaggataacctggaa
gatgtaaggattaccgttgttgatggtctgaaacacggagacctgaccgtgctcggtgtg
cgcaggaaattttttacaccgtctgatctggaagctggcattgttgtgtaccagcatgac
ggcagcgacacctacagcgataacattattttaagaatgacagatggaaggaatgaagtg
gaatttttgtttcccatcactattgttcctactgatgacgagcccccaataattaacgcc
aacaccggcctggtgctgtttaagaaagaaatgatgcagatctctcccttcattctgagt
gccacagatattgactcagaagactcctttataaggttcattcttgaagcaccatactct
actgtgggggagctcttactcaggcaagttgagccacccgctgacccttctcagtggaag
ttcagtgagacagatgagatgtttgagcaggtggtaactgagtggtctcagaaggatatt
ctcgatggaaagctgttctatcaacacatcggacctcacagcaccaccacagtgacggat
ttgcttgtgtttcgtgtccaggatgacaacgacccccctaatcagtcaggtgagcacacg
ttcaccattaaaatcctccctgtcgatgaccttcccccagtgctgttcccaggcaccacg
cttcatatgactgtccaggaatatgagctcactttcttcaggaagaaattcttgtgtttt
actgatctagattcagatgacagagacctgaagtacacaatcactaaagtaccaaccgat
actgatgagaacaatctagcccccttgggtaagattgtactgacagacagccctgacact
gtaattacagagtttacacaagcccaggttaatcaccacaaagtagcttacaagcctcca
gaccaggaactgggcatcactccaaaagtcgctcagttcacattcattgtggaggacaca
gctggtaactcagcagatggcttattcacaattttcctccagccagttgacaacaaaccc
ccagaaattatcaacacaggatttactgtcaaagaaacaagtacttttataattagcagc
aaggagttgtacgccactgacacagatacagatgatgaaaatatcatcttcactttgatc
caagctcctaaatatggacagctgcaatacttgggcatttatatgtcaaatggtgaaacg
ttcaatcttgaagatattgcaaacggcctcttgacttacctccatggtggagaagaatct
ctcagcgatgtaatcaaactttctctgagtgatggtttccatgaggtccccataactctg
agggtaactatagagccagttgatgacgagaccccgactatcatgctcccagctggcgtg
ttgggggccgccatagatgtgttggagaacggagcaacagagatcaccagtaacgtcatt
caaggacgtgataaagacacggatgacctcatgctggctttcattgttgaggaacctcca
aggctgggtgaaattatagttaatggagctccagctgagaggttcacccaggaggacatc
atcaacggagtggtggtgtatgctcacacttctggtgaaatcggtccagtcaaagtacac
gattccttcaacctaactctttctgatatgtctgatcagtgggttgtaggtggcaacaaa
gtccagggtgtgactgttcatgtgaccatccttcctgttgatagcattccacctgttgtc
agtgttgggggacaatttgttgtgatggaaggagagaagaatgtcattaccataagtcac
attcaagctgaggatgttgacaccaacaatgatgacatcctatgcaccattattgtccaa
ccaacatctggttatgtagaaaacatctccccagccacaggatctgagaagtcaagagct
ggtactgccatcactgcctttaccattaaagatattttgcttggtcacatctactacgtc
caaagcatccacaaaggagttgaacctgtggaggatcagttcacattccgctgttccgat
ggcatcaacttctctgaacgccactttctcaacattgtcatcattccggccaatgacgag
aaaccagagatcttcacacgtgagtttgtggtaatggaaggcatgaacttagtgattgac
actccttttctgaacgcagctgatgctgacatccccgaggacgagctgttttttgagatc
atcaaaaatcccaagcatggggcgataatccaacagctaaacacaggcaccgtccctgta
gaaaggttcagcttagaacagatcaaagaagcggccaacattgtctatgaacatgatgac
tctgagaccaaagaggacagctttgacatcaggctttccgacggaaaacatgtagtagag
aaaacagttctcatcattgttattcctgttgatgatgagacaccaagaatggctgtaaat
gacggccttgatgttgagattggggagacgaaggtaatcagcaacagggctttaaaagca
acagaccttgactctgaagatagagaactaacatatgttctgaaatatggtcccgggcaa
ggctaccttcagcgtataaacaaatttggtaatgttttgggaaacataactctggggatg
aacttcacacaggatgaaatagacaagcatcgcattctgtatgtacacacaggccaggag
ggcatccgagacctgctgaaatttgatgtcacagatggcatcaatcctcttattgatcgc
tacttttacatcaacattgggagcattgacatggttttcccagatgtaatcaacaaaggt
gtgacactcaaagaagggggaaaagtaacacttaccactgacctccttagcacatctgac
atcaacagtcctgatgagtatctcagctttagcatcacaagagcacccagccgggggcat
ttagagtgcactgacctcccaggtgttcccatttccaccttcacccaactgcagctggct
ggtaacaagatctactacatccacacatcagacgacgaggtcaaaatggacagctttgag
tttgaggtgacagatggttacaatcctgtcttccgaactttcagagtgtccatcactgat
gtagataacaaaaaacctgttgtcactgtgcacaagctggttgtggaggagggagaaacc
aaactcattacaccatttgagctgacggctgaggatcgggacacgcctaacaacctgctc
cgcttcacagtcacgcaggtacccgtgcacggccagctgctcttcaacaacagccgccca
attacatccttcaccaagcaggacctgaatgagaaccttatcagctacaaacatgatggc
acagagaccaacgaggacagcttttccttcatagtcacggacggcactcacacagacttt
tacgtttttcctgatacggtgtacgcgactcgcaagcctcaaatgatgaccatccacatc
aacacggtggataatggtgtgccccagattgtggtcaacaaagctgctgcttcattgaga
gtgctccaaacaggacacctgggctttgtttttacaagcaaggtccttagatcagaggac
agagacagcccccagaaggtcctgaagtacagcgtgtctgaggagccgctgcatggcttc
atcatgaacgtggagctgggcaatcatagcatcaacaccttcacacaagctgaaatcaac
gacatgaagatctgttatgtgctgttggatggtagcaacgccacaagtgatatcttctat
ttcacagtcgaggacaatggtggaaacaaactcaagcctcagccgttccgccttaactgg
gcctggatctctctggagcgggaatactacgtagtggatgaagacgccaaattcctggag
gtgacactgaaacgcagaggcttcctgggggaaacctcttttgtcagtatcggaacaaaa
gatggctccgctgagaaggacaaagatttccgtggcaaagcccagaagcaagtccagttc
aacccaggccagacgacagcgagctggagggtgaagatcttcactgaccaggagtttgag
acctcagagacctttgagattcagctgtcggacccggtcatggcggtgctggagtaccct
gatgctgcaacggtggagattgtagatcctggagatgaatcaacagttttcattccacaa
gcagaattcaaaatagaagaggatattggggagcttctagtgccagtcatgcgatcaggt
gatgccagccaggaacttatggttgtctgtttcactcagcaaggtaccgccactggcacc
atacccaccactgtcctctcctactccgactacatcacccgggctgaggaccacaccagc
gtgctgcgcttcgacaaggacgagagagaaaaggtttgccgaatcatcattatagatgac
tccctttatgaggaagaggagagctttaacgtcagcctcagtatgccgatgggcggtcag
ctgggcgccagtttcccatccgccaaagtcacgattttggcagacagcgatgatgagccc
tcgctgtactttgaggagcctgaatatgttgtggaggagagttcaggctatgtggaggtg
aaggtctggaggacgggtactgacctgtccaagatcgccacggttacggttcgctccaga
aagagcgatcctgtttctgcagaagctggactcgactatgtcggcattagtcgcaacctg
gactttgctccaggagtcaccatgcagacattcagggtgaccatcttggatgacctgggt
cagccaaaactggagggaccagagacctttgaccttgtgctgaggatgcccatgaatgct
gtattaggagaaccgagcaagacgaccatcaccatcaacgacactgtcactgacttgcca
aaggttcagtttaaggaggggagctacaaggtggatgaatctgacggcgaagtgaccgcg
atggtgtaccgcagcggagacatcagcctcagatccacagtgcgctgctacacccggcag
ggatccgctcaggttatgatggactacagcgagaggcccaacactgacgcctccatcatc
acctttctgccaggcgagtcggagaagccgtgcgtggtcggcctgatggacgactcggtc
catgaggaagatgaggagttccgcttggtgctggggagtccgaagagcaaatccccgtac
ggagcctcaattggggagcagaaggatgcgctggtcaccatcacagacgagaaagacaag
cccatcatccgtttttctgagatcaaatacagcgtgcgagaacctcaggtcaaaggtgag
gtggccagagtgaagatccccatcttgcgttttggagacgcatcaaaactgtcagtggtg
cgggtgcacacgaaggatggctctgccacgtctggagaggattacaacccgctgtctgag
gatgtggagttcaaggaaggtgagaaggaacattttgttgaaatcgagatcctgtatgac
ggtcacagagagatgagagaggccttcacggtccacatgaagcctgacgacaacatggtg
gctgaaatacagatgaacaaggcgatagtgtacattgaggagatggacagtgtcgcagat
gtcacgttccctgcagtgcctcatgtggtgtctctcctcatgtacgacgacacggccaaa
acccgagaccggcccagcccacccaacggataccctgttgtgtgtgtgacggcctgcaac
ccaaagtaccaggactttgataaaacgggttccatctgctctgcagagaacatcaacgac
actttgacccagtaccgctggttgatcagcgcgccaaccggaccagacggagtgaccagt
cccatgagggaggtggataccaacaccttcttcaccaataccaaatccatcaccttggac
tcaatctactttcaagctggttccagagttcaatgcgcagcaagagccttcaacaccaac
ggagacgctggcttagaactgtccagtcccatctttgttatcagtacagaggaaggaatg
tgtcagcctcgcatcccgggaactgtcggagcagaacctttctctgcgaagatccgctac
acgggtccaaatgatccggacttccccaaccttatcaaactgaccatcaacatgccgcac
atggatggaatgctcccggtgatctccaccaggcctttgtctaactttgagctcacgctg
agcccggacggcacacgtgtggggaaccaccgctgctccaacctgctggactttaacgag
atccaaactggttacggcttcatcacagacgcaacaaagaaccctgaaatcatcggggag
acgtcgccgtaccagtacagcaccgccatgcgttcagccaattcactgcgcttctacagg
aacctgaacctggaagcctgcctctgggagttcaccagctactacgacatgtctgagctg
ctcaacgactgcggcggttccatcggcactgacggacaggtgttgaacctggtccagtcc
ttcgtcactttgcgggttcctctgtttgtgtcctacgttttccactcccctgtcgctgtc
ggaggctggcagcactttgacctgcagtcggagcttaagctcacctttgtttatgatacg
gccattctgtggcaggacggcatcggcagcccgcctgaagctgaactccaaggagccatg
tatcccaccagcatgcgcataaatgaggagggtcgcctggtggtcaacttcaagaccgaa
gctcgcttcaggggacagtttgttatgtctcatccaggaaccagtgtatcatccatggta
atgtgtgctgacattcccggactgacctttaccctcgctttggtcagaactgaaccgaca
tacaaccagcccatgcagcagtggagtttcgtctcagattttgcagtgcgggactactct
gggacctacacagtgaagctggttccctgcatcgcttcgcccaatggggagttcagcatc
cctcccgtctgccacccgagagagccgctcacttttgacatggacattcgcttccagcag
gtgagcgacccagtggcggctgaatttagtctaaacactcagatgttcctgctgtctaag
aaagagctctggttgtctgacggctccatgggctttggagaaggaactgatgctgctttt
tcagaaggctccacgatttacggccgtgtaatggtagaccctgtccagaacctgggcgac
tccttctcctgcagcattgagaaggtcttcctctgcactggggcggacggatacgtcccc
aagtacaaccctaccaacagggagtatggctgcctggcagacgctccctctctgctctac
agattcaagatcttggacaaagcccagccagagactcaagcttcagcatttggggacgtt
gcttttaaggccaaactggcccatgatgctcctggagctcaaacgttggtcacacaacca
gggtcagacggtttcatgctctcttcttcgccactttttcaggtggctgctggtcgggaa
tggttcatccacactatctacaccctccgctccagagagaatgcaaaccgtcacattggc
aaacgcagcgtggagtacctccaacacagcgtctcttcggtcgcgcagcctcaggtctcg
aacggtcgccaacgcagggccgccccggcgctctccggtcccgcactggtccaggacatt
ggcatcaaaaacaaccggggcaccaacatccagcacatcgccctggaccgatccgaccgc
atggtggtgagccagcggcaaccctggtcgcccagcggtgaccgccttctggagcgcccc
ctgctggagagctcgggcagagagccggctgacacctccttcctgcccatgctggtggga
atcgtaggtctgatcttgctcatctgcctcatcgccatcgttgtcattctgctgctgagg
cgcaagaggaaggaaaaggaagctcagttccctccgtacaccacttcctcctcatctgcc
tactcaggctacaggcctacaggcatgtggagcagttcagacagctctgaggtctaa
DBGET
integrated database retrieval system
