KEGG   Gambusia affinis (western mosquitofish): 122829486
Entry
122829486         CDS       T07758                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gaf03036]
    122829486 (kdm4c)
Enzymes [BR:gaf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122829486 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122829486 (kdm4c)
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122829486 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5 LBR_tudor
Other DBs
NCBI-GeneID: 122829486
NCBI-ProteinID: XP_043970003
LinkDB
Position
LG04:complement(10186565..10218483)
AA seq 1579 aa
MAGAEVSAPANPTCKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRQT
YDDIDDLMIDAPIQQMVAGQSGLFTQYNIQKKPLSVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGSLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTTFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKGCEAFL
RHKMTLISPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWID
YGKVATQCTCSKDMVKISMEPFVKRFQPDRYASWMLGKDSTLIDHMVPTPSTTPELQSWL
QRRRKTKSANKGGHSRMRSKRLRTTEEPVDLDGSLALSSSKRKPLGGQSGPKARRSAAGT
SYKELEKGKKKQAEPKHNQNQNLPQLSACKQMCVVKVNRVESKNLEFSKKETSQSNPQTL
LVEDKLKAAESEPQDLSGVTNWSPEGPRESHGAPQPHLEVSDSRFSSAQQDLDSPSRMNL
SAENLMDTCLSEPQAHVSASSTSALTLSIDTDRSMDTGTRNYTNDTVKAENMDVDVDPKH
VNQHSDMKALYEPAEGDGCTPSGSFAASQHTPSVGKGSTEESLLPPLLQRNAADMPQLTP
EPAGKVGASPLPPVLTQEMPSLTPADDDFTHFHKSGALSHQVAPVLQRETPTGSPSSQEA
REEGTHHDNRWHLEGSVNCEETTETNTDHLTASGLCKRTSGDVHEMLIKSATEGDHATLE
SFIPEQSDTTQSQLVQRSAHLNSLNPNKDNYRTQRDGACSPNVMLSSANASDVPLTPDSS
LHPQHENHSAFSIKHSALKPSYHTMYSNCSSQHTEPKTSSCSIWKNFTSQSPAVLIQNLH
PDLPSDFSHDSLPYTMWTEPQCKEVTDLEDTAKDLCRSENQEDEGGGLTWAQLEPTSLLS
VGAIEPLGLCEDYELQKVEENGAESVSRQSEADACLYPERVASLHRTEQDETDMEDVEAS
DREDEEQQHSLKGRCSSDSSEEEEENDPNNYKCNEPGLEPGEVSAYTALSSKRTTKSWRH
PLRKPTARAVPTAVKQQTASDEEPPEASLAEEEEDEEGENEMEGWAKPLIYLWQNRKSCF
SVEREYNAHAATMEPHCAVCTLFMPYYQADDKTEDSKSVTAKDPSKASSPMETPPTPGCG
GLRRSKPLVPEICFSFREQNCPPTPTNPLLQEDGTSPLLYCQSCCLQVHASCYGVAAEDI
SEQWLCDRCLEGGFAAECCLCNLRGGALKKTQNNKWAHVMCAVALPEARFGDEAKRSPID
TSRIPMQRFKLKCIYCRSRCAGKRQAGACIQCSCGRCPTSFHVTCAHAAGVTMEPDDWPY
VVSVTCHRHQSRSSSANQRLYQPPISLGQTVISKHKNLRYYSSKVTEITSQTFYEVMFDD
GSFSNDTYPEDIVSRDCVNFGSPEVGETVQVKWPDGLFYGAKYLGSNVSYMYQVEFEDGS
QVLAKREDIYTLNEDLPKKVKRRLSTASSMRFQDAFFTTQGERKRQRTPNSRFQNDYVAL
PGLRTTAKSTWEHRSHKGK
NT seq 4740 nt   +upstreamnt  +downstreamnt
atggcgggagcagaggtatccgcccctgcaaaccccacctgcaagattatgaccttcagg
cccacgatggaagaattcaaagacttcaaccagtacctggtgtacatggagtctcagggt
gcacaccgggcaggcttggctaaggtgatcccccctaaaggctggaagccgcgtcaaacc
tacgacgatattgatgatttaatgatcgacgctcccattcagcagatggtcgcgggccag
tctggactcttcactcagtacaacatccagaagaaacctcttagtgtgcaggagttcagg
cggttagcaaacagtgacatgtactgtacacctcgctacctgaattatgaagatcttgag
aggaaatactggaaaaacctcacttttgtctcacccatatatggtgcagatgtcagtggc
agcctctatgatgaggacgtagaagagtggaacattggacatctgaactccatcctggat
gttatcgaggaggactgtggtgtgtccatacagggggtcaacacgccgtatctctacttt
gggatgtggaagaccaccttctcctggcacacagaggatatggatctgtatagcatcaac
tacctccactttggagagcccaaatcctggtatgccatccccccggagcacgggaaacga
ctggagcgcctggctacaggttttttccccaacagcttcaagggctgcgaagcttttctg
cgccacaagatgaccctcatctctccctctatactgaagaagtatggcattccctttgat
aagattactcaggaagccggagagttcatgatcaccttcccgtatggttaccatgccgga
ttcaatcatggcttcaactgtgcggagtccaccaactttgccactttgcgctggatagac
tacggaaaggtggccacacagtgcacatgtagtaaggatatggtgaagatatccatggaa
ccctttgtgaagcgtttccaacctgaccgttatgctagctggatgctgggcaaggactcg
acgctcatcgaccacatggttcccactcccagtacaacaccggagctgcagagttggtta
cagaggcgccgtaagaccaagtctgctaacaaaggcggtcactctcgtatgcgctccaaa
cgcctcaggaccacagaggagccggttgatctggatggcagcttggcactgagcagcagc
aagagaaaacctctgggtgggcagtctgggcccaaggcgaggcggtccgcagcagggacc
tcctacaaggagctggaaaaagggaagaaaaaacaggctgagcccaaacacaaccagaat
cagaacttgcctcaactttctgcttgcaaacaaatgtgtgttgtcaaggtaaaccgtgtt
gagagtaaaaatttggagttttctaaaaaggagacatctcagtcaaacccccagacttta
ctggtggaggacaagctaaaagcagccgagtctgaaccgcaggacctctcaggggtcaca
aactggagcccagaaggacccagggagagtcacggggctccacagccgcatctggaagtc
agcgattcgaggttttcttctgctcagcaagacctcgactcaccttcccgcatgaacttg
tctgcagagaatctaatggacacgtgtctctctgaacctcaggctcacgtatcagcttcc
tctacttcagcattaactttgagcattgacactgacaggagcatggatacgggtaccagg
aattacactaacgacactgtaaaagcagagaacatggacgtcgatgttgatcctaaacat
gttaatcaacactctgacatgaaagcactttatgagccagcagagggcgatggttgcaca
ccaagcggctcttttgctgcctcacaacacactccgagtgtgggaaaaggcagcacagag
gaaagccttttgcctcctctgttgcagaggaatgcagcggatatgccacaactcacaccg
gagccggccgggaaggtgggcgcttccccgctgccacctgtgttgacccaggagatgccc
tccctcacccctgccgacgatgacttcactcatttccacaaatccggagcattaagccac
caggtcgcacctgtgcttcagagggagacgccaactggctcgccgtcctcacaggaagct
agggaggaagggactcaccatgacaaccgctggcatttagagggttcagttaattgtgag
gagacaacagaaacaaacacagatcatttaactgccagtggtttgtgcaagagaacatct
ggcgacgtccatgaaatgttaataaaatctgctacagaaggagatcacgcaacgctggaa
agtttcatccctgagcaaagtgatacaactcagagccagctagttcagagaagcgcacat
ctcaactcgcttaatccaaataaagacaactacagaactcagagagacggtgcctgcagt
ccaaatgtcatgctatcatctgctaacgctagtgatgttcctctaacccctgattcttca
ctacacccccagcatgagaaccactcagcattcagcattaagcactcagcattaaaaccc
agctaccacactatgtactctaactgttcttcccaacacactgagcctaaaacctcctcc
tgtagtatctggaagaacttcacttcccagagtcctgcagttctcatccagaatctgcac
ccagatctcccgtctgatttctcccatgattctctgccttacaccatgtggaccgaacct
cagtgcaaagaagttacggacctggaggacactgcgaaggacctatgcagatcagagaac
caggaggatgaaggtggcggtctcacctgggcccagctggagcccacctcactcctttca
gtcggtgctatcgaacctctgggactctgtgaggattacgagttgcagaaagtcgaagag
aacggagctgaatctgtgtcgagacagagcgaggccgatgcgtgtttataccccgagagg
gtagcatcgcttcaccggaccgaacaagacgagacagacatggaagatgtagaagcatct
gatcgtgaagatgaagagcagcagcatagtttgaaaggacgctgcagcagtgattcatca
gaggaagaagaggagaatgacccaaataactacaaatgtaatgagcctggccttgaacct
ggggaagttagtgcttacacagccctgtcatccaagaggaccactaagagctggcgtcac
cctctcaggaaacccaccgcaagagccgtccccaccgctgtgaaacaacagactgccagt
gacgaggagcctcctgaagcaagcctggcagaagaggaagaggatgaggagggggagaat
gagatggaaggatgggcaaagcctctcatctacctttggcaaaacagaaagagctgcttc
tctgtggagagggagtacaatgctcatgcagccaccatggagccacactgtgctgtttgc
acactcttcatgccatattatcaggctgacgacaaaactgaggacagcaaatctgtcaca
gcaaaggacccctccaaagcttcgtctccaatggagacaccccccacgcctggctgcggc
gggttgaggaggtccaagcccctggtccctgagatctgcttttctttccgagaacagaac
tgccccccaactcctacgaaccctctgctgcaagaagatggcacttcccctctcctgtac
tgccagagctgttgtctgcaagttcacgcaagctgctacggtgtagctgcagaagacatc
agcgaacaatggttgtgtgatcgctgtttggaaggaggctttgcagctgagtgctgtctc
tgtaacctcagaggtggagcactgaagaaaacccaaaacaacaaatgggcccacgtgatg
tgcgccgtcgcacttccagaggcgagatttggtgatgaagccaagaggagtcccattgac
accagtaggatccccatgcagcgttttaaactgaaatgcatctattgtcgcagccgctgt
gcagggaagcgtcaggcgggcgcctgtatccagtgctcatgtggccgctgtcccacctcc
ttccatgtgacctgtgcccatgctgctggtgtcaccatggagccagacgattggccgtat
gtggtatcagtcacctgccacagacaccagtcacggagttcgtctgctaaccagcgattg
tatcaacctcccatctcactgggccagacggtgatctccaaacacaaaaacctgcgttac
tacagctccaaagtgaccgagatcacatcgcagaccttctatgaggtcatgtttgacgac
ggctctttctctaatgacacctacccagaggacattgtgagtagagactgtgtgaacttt
ggttctcctgaagtcggggaaactgttcaagtgaagtggcctgatgggcttttctatggc
gctaaatacctgggatccaacgtttcctacatgtaccaggtggaatttgaagatggatct
caggtgctggccaaaagagaagatatctacactttaaatgaagatcttcctaaaaaggtg
aagcgtagactttcgacagcctcaagtatgcgctttcaggatgccttcttcaccacgcag
ggggagcggaaaagacagaggacaccgaactcacgcttccagaatgactatgtggccctg
ccaggcctccgtacgactgccaaaagcacatgggagcaccgcagccacaaagggaaatga

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