Gambusia affinis (western mosquitofish): 122829489
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Entry
122829489 CDS
T07758
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122829489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122829489
03036 Chromosome and associated proteins [BR:
gaf03036
]
122829489
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122829489
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122829489
Chromatin remodeling factors
BAF complex
122829489
PBAF complex
122829489
GBAF(ncBAF) complex
122829489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
122829489
NCBI-ProteinID:
XP_043970013
LinkDB
All DBs
Position
LG04:complement(11409767..11427659)
Genome browser
AA seq
1666 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPNAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPVPS
GYGPENMHSLHKPMEGMHEKSLCDDSRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVASNGPPSGPLMPSTSSSSSSAGSGSASASLDGPNVDQHSLGPNNRSGPP
GNSGPGPSPGPSLGSSVPSLGSGLDGSGPGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQ
PLPDHLQMAVQGKRPMPGMQQQQPMSSLVSGATAGPGGGPTGPGSGPAPMGSSYSRPHGM
MGPNMPPPGPSGTPVGMQGPNPNGPSKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAP
PSVPPAASPVMPPQTQSPGQPAQPPPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQ
ARIAHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALD
AKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTG
KIQKLTKAVSTYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQ
QTDEYVANLTELVRAHKAAQALKEKKKKEKKKKKLESAEGQTPALGPDGEPLDETSQMSD
LPVKVIHVDSGNILTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQ
PSSAPVEEKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAVT
EKVEKQSTLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH
KRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTT
YEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLP
ELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRR
LKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTI
MQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKV
LLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPGSEYFIFLLSTRAG
GLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAK
YKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQELVNEEDEVPDDETVNQ
MIARSEEEFEQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEE
KMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEMEEEVRHKKTTRKRKRDRDLDLPGP
SSSSGSRGRGDRDDDGKRQRKRGRPPAEKLSPNPPGFTKKMRKIVDAVIKYKDSSSGRQL
SEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQNAQTFNL
EGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESDEEEEEQEDGSESESRSVKVKIRLSR
KDKGGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEEHSASGTDEEA
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacctgatcctcccatggggggtaccccccgtccaggtccatcacccggtcct
ggcccctcccccaatgctatgctgggccccagcccaggtccttcccctggctcctctcac
agcatgatggggcccagccctggtcctccttcctctggacactcccagccagtaccctct
ggatatggccctgaaaatatgcactctttgcacaaacccatggaaggcatgcatgagaag
agcttgtgtgatgacagtcgcttcagtcagatgaagggactttcgatgagacagggcggg
cacagtggcatgggccctccacccagccctctggaccaacattcacaaggctaccactct
ccacttggtggctctgaccactctagccctgtcgcttcaaatggccccccatccggtcct
cttatgccatcaacctcctcctcatcatcttctgcaggttctggatctgcttcagcctct
cttgatggccccaatgtagatcaacattctttggggcctaataaccggtccggaccgccg
gggaattctggaccaggccccagccctgggcctagcctgggctccagtgttcccagcctc
ggttctggccttgatggtagtggccctggaggtcctggtgggccgactccctttaaccaa
aaccagcttcaccaactcagagcccagatcatggcgtataagatgctcgcccgaggacag
cccctgccagatcatctccaaatggctgttcaaggaaagaggccgatgccagggatgcag
cagcagcagcccatgtccagtctggtttctggagctactgcaggaccaggaggtggtcca
acaggacccggatcagggcctgcacctatgggctcaagctatagccggcctcatggcatg
atgggtcccaacatgcctccccctggtccttcagggaccccagttggcatgcaaggaccg
aatcccaacggaccctccaagtcatggcctgaaggccccatggtgaatgcagcggccccc
tccaacgcaccccaaaaattgatcccccctcagcccacaggcaggccttctcctgctccc
ccatccgttcccccggctgcttcccctgtaatgcccccacagacccagtcccctggtcag
cctgcccagcctcctcccatgatgccttaccacgccaagcagaaccgcattacccccatc
cagaaaccctgcggtctcgaccctgtggagattctgcaagagagggagtacaggttgcag
gctcgtattgctcatcgcattgctgaattggagaacctgcctggttctttggccggtgat
ctacgtaccaaagctacaatagagctcaaagctcttcgtttgctgaacttccagagacag
ctgcgtcaagaagtagtggtgtgcatgcgacgtgacacagctctcgagactgctctggat
gccaaagcctacaagaggagcaagcgccagtctctgcgggaggcccgcatcacagagaaa
ctggagaaacagcaaaagattgagcaagagcgcaaacgcagacaaaaacatcaggagtac
ctcaacagcattctccagcatgccaaagacttcaaggagtatcaccgctcagtcacggga
aagattcagaagctgaccaaagccgtgtccacctaccacgccaacactgagcgtgagcag
aagaaggagaatgagcgcattgagaaagaacggatgaggaggcttatggctgaagatgaa
gagggctaccgtaaactgattgaccagaagaaggataagcgcctggcctatttgctgcag
caaactgacgagtatgtcgctaacctcactgagctggtaagagcccacaaagctgcacag
gccctcaaggagaagaagaagaaggaaaagaaaaagaagaagttagagagcgcagagggt
caaactcctgctcttgggccggacggagagcccctggatgaaacgagccagatgagcgac
ctgcctgtaaaggtcatccatgtggacagcgggaatatcttgacgggtgtggatgctccg
aaggctggacagttggaaacatggctggagatgaaccctggttatgaagtcgctccccgc
tcagacagtgaagacagtgaggaggaggaagaagaagaggaagaagaagaggagcctcaa
ccttcatcagctccagtggaagaaaagaagaagattacggacccagacagcgaagacgtg
tcagaagtggatgtccgacatattattgaaaatgctaaacaggatgtggacgacgagtac
agtggtgcagcgttcgctcgaggactccagtcgtattattctgtggcccatgccgtcaca
gagaaggtggagaaacagtctactttactgataaatggacagcttaaacaatatcagatt
aaaggtctggaatggttagtttctctttacaataataatctgaatgggatcctggctgat
gagatgggtttgggaaaaaccatccagacgattgctcttatcacctacctcatggagcac
aagcggctcaacggaccctacctcatcattgtccccctctcaactttgtccaactgggtg
tatgagtttgacaagtgggcaccatcggtcgttaaagtgtcctacaaagggtctcctgct
gctagaagagccttcgtcccccagctgcgaagcggcaagtttaatgttttactcaccact
tacgagtacatcatcaaggacaaacaagtactggccaagattcgatggaagtacatgatt
gtggatgaaggccaccgcatgaagaaccaccactgtaagctgacccaggttctaaacacc
cactacctcgctccaaggcgagtgttgctgaccgggacgccattgcagaacaaactacct
gaactgtgggcgctcctcaacttcctgctgcccaccattttcaagagctgcagcacattc
gagcagtggttcaacgccccgtttgcaatgactggagagaaggtggatcttaatgaagag
gagacaatcttgattattcgtcgcctgcacaaagtgctgcgccccttcctgttgcgaagg
ttaaagaaagaagtggaggctcagcttccagaaaaggtggaatatgtcatcaagtgcgac
atgtcggctcttcagagggtcctgtaccgacacatgcaggccaaaggggtcctgctcact
gacggatccgagaaagacaagaagggtaaaggaggcacaaaaactctgatgaacaccatc
atgcagctgaggaagatctgtaatcatccctatatgttccagcaaattgaggaatctttc
tctgagcatttaggattctctggtggaatagtccaaggtcctgacctttatcgagcttca
ggaaagtttgaggtgctggatcgcatcctgccaaagctgagggccacaaaccacaaagtg
ctgctcttctgccagatgaccacactcatgaccatcatggaggattacttcgcctaccgc
aacttcaagtatctgcgtctggacggcacaacaaaggctgaagaccgaggaatgctgctg
aagacatttaatgacccggggtcagagtactttatttttctgctgagcacaagagctgga
ggtctcggcctcaacctgcagtctgcagacactgtgattatttttgactctgattggaac
ccacatcaggacttacaggctcaagacagagcccatcgcatcggccagcagaacgaggtg
cgagtgctgcgcctctgcaccgtcaacagcgtggaagagaaaattctggcagctgccaag
tataaattgaatgtggaccagaaagtcatccaggccggcatgttcgatcagaaatcctcc
agccacgagcggcgggccttcctgcaggccatcctggagcacgaggagcaagacgaggtc
tggggtcaagagcttgtgaatgaggaggacgaggtgccggacgatgagaccgtcaaccaa
atgatcgccaggagcgaagaggagtttgagcagttcatgcgcatggacctggacaggcgt
cgcgaggaggctcgtaatcctcggcgaaaacctcgtctgatggaagaggacgagcttccc
acctggatcatgaaggacgatgctgaagttgagcgtctgacctgcgaagaagaggaggaa
aaaatgtttgggcgaggttcccgacagcgcaaggaggtggactacagcgattcactgaca
gagaaacagtggctgaaggcaattgaggaaggcacactcgaagaaatggaggaagaagta
cgtcacaaaaagacaacccgaaagaggaagagggaccgtgatctggatctcccaggaccc
tcgtcttcctctgggagccggggacgcggcgacagggacgatgatgggaagagacaacgg
aagaggggaagaccgccagctgagaaactctcccccaaccctccgggcttcacaaagaaa
atgaggaaaatagtggatgctgtcatcaaatataaagacagctccagcgggcgtcagctc
agcgaggttttcatccagctgccatcccgaaaggagctgcccgagtactacgagctgatc
cgcaagccagtggacttcaggaagatcaaggagaggattcgaagccaccgctaccgcagt
ctgggtgacctggagagagacgtcatgctgctcttccaaaacgctcagaccttcaacctg
gagggttccctgatatacgaagactccatcgtgctgcagtcagtgttcaccagcttgagg
cagaagatcgagaaggaagaggagagcgagggagaggagagcgatgaggaggaggaagag
caggaggacggatcggagtcagaatctcgctcagtcaaagtgaaaatccgcctgagtcga
aaggataaaggtggagatcgaggaaaggggcgcagcaggcgaacaggacgcacccgcgcc
aaaccggtcgtcagtgatgatgactccgaggatgaacaggaggaggagcactcagccagc
ggcactgatgaagaggcttga
DBGET
integrated database retrieval system
