Gambusia affinis (western mosquitofish): 122829502
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Entry
122829502 CDS
T07758
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122829502
Membrane trafficking [BR:
gaf04131
]
Protein recycling
Others
Others
122829502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
122829502
NCBI-ProteinID:
XP_043970030
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Position
LG04:1084183..1224571
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AA seq
1276 aa
AA seq
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MQLLPLRARGFISSNPSTWTTWAQSHFGLHRIWLQRRNLQQFLFHIELRTSSRRGSEDSQ
HPLHPVLPPAMETEVRFCPKWHGALRFGLFLLLSGLLGVAEAEITCRSCRDGNLWSGAQE
LLLRVETSGPAAGVMGEVLGSGDRTGRVPCEPGPAGCAPDRGQHAQLRRDRITDSGKVSQ
HRDGVGSTPRRFRRDSGGDAVSSAPAEGAAAAAGRRAARWSGEERRAAGARQEELKLNSS
TFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDK
VGAKTILSYLYVSPNNKRKIMLLTDPEIESSLLISSDEGATYQKYRLNFYILSLLFHPEQ
EDWILAYSHDQKLYSSVEFGRRWQLVHEKVAPNRFYWSKMGLDKEPGLIHLETSISEGQA
LYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTAGRPVYYVSAKRDVFTPMK
LPKYTLPKELHVISTDENRVVAAVQEWNQNETYNLYVSDTSGVFYTLALENVVSSMGLEG
NVMVDLYEVAGIKGMFLANKKTENQVKTYITYNRGRDWRLLQAPSRDLRGNSINCVLPYC
SLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGSELTTSNVSAFITSDAGNTWRQIFD
EEYAVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRQWNKYSFSNTPLFVDGVLGEPGEET
LIMTIFGHFSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKP
TSRCVMGKTYSVAMTLAPCDCTEADFECDYGYERRTDGKCSPAFWFHPSSMSRSCTTGMT
FLNSTGYRKVVSNNCTAGVIAEYTARRQHCPIQAPKGLHLVTSEGRLTATLGANVTFLVF
LEEGDGARTSVTVDFGDGHALTYSNVSSIEDGIKHIYKSVGIYRVTATGENSLGSETATL
FLHVTCQLEHIHLSAPFVAVRNKEVNLTAVLHPSQVGTVTYIWWIGNNTEQPVITLEGSV
ACTFSREGINTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDEHNPDVAEWRQDV
SRVIRNALIQATGVREDLLLVTVLPGLPTAAEFFLLPDKQLTEGKAEKSSAHLDQLSDLL
LNALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVAGLAVFVIY
KFKRKIPGLNVYAQMQNDKEPEMMSPANPSEATPSSPQDLVPSLEILDTELNSRPIGCMK
PHVHVKFSTELPTFIV
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcctccctctgcgcgcgcggggcttcatttcatcaaatccttcaacttggacc
acttgggctcagtcgcactttggactccaccgcatttggctccaacgccgcaacttgcag
cagtttctcttccacatcgagctcagaacctcgtcccggagaggcagcgaagactcccag
catccgctgcatcctgttcttcccccagcgatggagacggaggtcaggttctgcccaaag
tggcacggtgcgctccggttcgggctcttcctgctcctgtccggcttgcttggcgtcgcc
gaggctgagataacctgcaggtcatgccgggatgggaatttgtggtccggagcgcaggaa
ttactgctgagggtcgaaacaagtggtcccgctgccggggtaatgggggaagttttgggg
agcggagaccggaccgggagggtcccctgcgagccgggccccgctggatgcgctccagac
cggggccagcacgcgcagctgaggcgggaccggattacagacagcgggaaagtttcccaa
cacagggacggtgttggttcgactccacggcgcttcaggagggacagtggcggggatgca
gtcagctcagccccggcagagggagcggcggcggcggcggggcgcagagcggcgcgctgg
agcggagaggagcgcagagcggccggcgcgcggcaggaggagttgaagctcaacagctcc
acgttcgccctgaccggggactcatcccacaaccaggccatggtgcactggtccggccag
aacagcagcgtcattctgatgctaaccaaactctttgacttcaacctgaacagtgtgaca
gagagttcattatggaggtcaactgactatggagcaacgtaccagaagctgaacgacaaa
gtgggagcgaagacgatcctcagctacctgtatgtgagccccaacaacaagagaaagatt
atgctgctgacggatccggagatagagagcagcctcctgatcagctccgatgaaggagcc
acataccagaagtaccgactcaacttctacatcctgagcctcctgtttcaccccgaacag
gaggactggatcctggcatacagccacgaccaaaagctttacagttctgttgagtttgga
agaagatggcagctggtgcacgagaaagtggctcctaatcgtttctattggtccaagatg
ggtttggacaaagagccgggcttaattcacctggaaaccagcatctctgaaggacaggcg
ctgtacgtcacctgcaagctgcagaactgcacagacgccaacaagggcaaaccattcccc
ggatacattgaccccaattccctggtggtgcaggatgagtatgtgtttgtccaggtgtcc
actgcagggaggccggtctactatgtttctgcaaaacgagacgtctttaccccgatgaag
ctgccaaagtacaccttgcccaaggagctgcatgtgatcagtacagatgaaaaccgcgtg
gtggctgctgttcaggagtggaaccagaatgaaacctacaacctgtacgtgtcggacact
tcgggcgtcttctacactctggccctggagaacgtggtcagcagcatgggtctggagggc
aacgtcatggtggacctctatgaggtggcaggaataaagggcatgttcctcgccaacaaa
aagactgagaaccaagtaaagacgtacatcacttataaccgcggcagagactggaggtta
ctgcaggctccgagcagagacctgagaggcaacagcatcaactgcgtgctgccgtactgc
tcattacatctccatcttcacgtgtctgccaacccctacacatctggaaacatcgccagc
cgggagtcggcgccggggatcatcgtggcctcaggctccatcggttcagaactgaccacc
agcaatgtgagtgcgttcatcacctctgatgcaggaaacacgtggagacagatctttgat
gaggagtacgccgtgctttacctcgaccaaggtggagccttggtggcaataagacacact
ccacttcccatccgacacctgtggttgagcttcgatgaaggacggcagtggaacaagtac
agcttctccaacacgcctctgtttgtggacggggtgctgggcgagccgggcgaggagacg
ctcatcatgacgatcttcgggcacttcagtcatcgctctgagtggcagctggtgaaaata
gatttcaggtccatcttcaacaggagatgcacggaggcggactaccagacgtggcaccta
cacaaccagggtgagccgtgtctgatgggcgtgaagagaatctaccggaagctgaagccg
acctccaggtgcgtcatgggaaagacgtactccgtggcgatgaccttggctccctgcgac
tgcacggaggcggacttcgagtgtgattatggctacgaaaggcggactgatgggaagtgc
agcccggccttctggttccatccgtcctccatgtcccgcagctgcaccacgggaatgact
tttctcaacagcacgggctacaggaaggtggtgtccaataactgcacagcaggagtgata
gcagagtacacggcccggcggcagcactgccccatccaggctcccaaaggcctccacctg
gtcaccagcgagggccggctgaccgccacgctgggcgccaacgtcaccttcctggtgttc
ctggaggagggagacggagcgaggaccagcgtcacggtggattttggagatggtcacgct
ctgacgtactccaacgtgagctccatcgaggacggcatcaagcacatctacaaatccgtg
ggaatctaccgggtgacggccaccggggagaacagcctgggttctgagaccgccacgctc
ttcctgcacgtcacatgtcagctggagcatatccatctctctgctccctttgtggcggtg
aggaacaaggaagtgaacctgaccgccgttctgcatcccagccaagtgggaacggtcacc
tacatctggtggatcggaaataacaccgagcagcctgttatcaccctggagggaagcgtg
gcgtgtacgttctccagggaagggatcaatacagtcacggtgcaggtgtctgctgggaac
gccatcctgcaggacaggaaaactatcgctgtccacgaatatttccgatcccacctgctg
gccttctcctccaacctggacgaacacaacccggacgtggccgagtggaggcaggatgtg
agccgggtgatccggaacgctctgatccaggcgacaggcgtacgggaggacctgctcctg
gtcaccgtcctgccaggtttaccaacagcagccgagtttttcctgctgcctgacaagcag
ctcaccgaggggaaagcagagaagagctcggctcatttagatcagctctctgacctcctg
ctgaacgccttgaatcagaacctggtccagttcacgctgcggccgggggtccaggtcacc
gtgtacgccgctcacctgtcggcagcgcccctggtggacaccagcgagaaccacagtggc
tccgccatgctaatgctgctctctgtagtggttgcgggtttagctgtgtttgtcatctac
aaatttaagaggaagatcccaggcctcaacgtctatgcgcagatgcagaacgacaaagaa
ccagaaatgatgagtccagccaatccctcagaggccacgcccagctcaccgcaggacttg
gtgccttctctggagattctggacaccgagttgaactcgcggcccatcggatgtatgaaa
cctcatgtacatgtgaaattctccacagaacttcccacattcatcgtctga
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