Gambusia affinis (western mosquitofish): 122829516
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Entry
122829516 CDS
T07758
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122829516 (rhbdl3)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122829516 (rhbdl3)
Peptidases and inhibitors [BR:
gaf01002
]
Serine peptidases
Family S54: Rhomboid family
122829516 (rhbdl3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
AIF-1
EH
EF-hand_11
EF-hand_9
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
122829516
NCBI-ProteinID:
XP_043970053
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Position
LG04:11644923..11699054
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AA seq
415 aa
AA seq
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MEESSPRMTGGTREAPVNISPAVAAHAEGEEIEVLESTDVLPVAPEEVQWKSLFDQYDPE
NSGFISTERFRDLLATHGSELDPHKLEVLLALADGNSDGKICYQDFVNLMSNKRSNSFRR
AILQGSRQLKGCSLRDEVGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYCPPPWFILAI
TIAEVAVFMYYGIQLDRLVLQVSSSSFLKSPLPYHPQLRAQAWRYFSYVFMHTGIEHLSL
NMAMQLLVGVPLEMVHGALRIGLIYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHL
ANVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVLV
GLTLGVVVLQNYEQRLQEQSLFWIFFCVYTLFVLCAVFWNVFAYSLLDVRIPPAP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcagcccgaggatgaccggcggaacccgggaggctccggtgaacatctcc
ccggcggtggctgcccacgcagagggcgaggagattgaggttttggagagtaccgacgtc
cttcccgtagctccagaagaagtacaatggaaatctctgtttgaccagtacgacccagag
aattcaggcttcatcagcacagagcgctttagggacctgctggcgacccacggctctgaa
cttgacccccacaaactggaagtgttgctggctctcgctgatggcaactctgatggaaaa
atctgctaccaggactttgtcaacttgatgagcaacaagcgctccaacagtttccggagg
gccattctgcagggcagcaggcagctgaagggctgcagtctcagagatgaggtgggcttg
gggctgtcccagcggctggttcgccatgttgcctatgaaacgttaccccgcgaggttgac
cgcaagtggtactttgacagctacacatactgcccccctccttggttcatcctggctatc
accatcgcagaggttgcagtgttcatgtattatggaatccagttggatcgtttggtcctg
caagtatccagttcgtccttcctaaaaagccccctaccctaccatccccagctccgagcc
caagcctggaggtacttcagctacgtctttatgcatactgggattgaacatctgagcctg
aacatggccatgcagctgctggtgggagtgcctcttgaaatggtccatggtgccctgagg
atcggactgatctacgtgtgtggtgtgctggcagggtctctggcggtgtcggtcactgac
atgacggctccagtggtcggatcgtctggaggagtgtacgcccttgtctcagcacatttg
gccaatgttgtaatgaactggtcgggaatgaagtgtcagtttaagttattccgaatggcc
atggccctggtttgcatgagcgtagagtttggtcgggctgtgtggctgcggttctaccct
ccagccttccccccgtgccccaaccccagctttgtagctcacctggggggagtcctggtg
ggtctcaccctaggcgtggtggtcctgcagaactacgagcaacggcttcaggagcagtcg
ctgttttggatatttttctgcgtctacaccttgtttgtgctctgtgctgtgttctggaac
gtttttgcctacagcctgctcgatgtgcgaatacccccggcaccatga
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