Gambusia affinis (western mosquitofish): 122829597
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Entry
122829597 CDS
T07758
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04115
p53 signaling pathway
gaf04140
Autophagy - animal
gaf04150
mTOR signaling pathway
gaf04218
Cellular senescence
gaf04910
Insulin signaling pathway
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122829597 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122829597 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
122829597 (tsc2)
04218 Cellular senescence
122829597 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
122829597 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122829597 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gaf01009
]
122829597 (tsc2)
Protein phosphatases and associated proteins [BR:
gaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122829597 (tsc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
122829597
NCBI-ProteinID:
XP_043970218
LinkDB
All DBs
Position
LG04:21480478..21507693
Genome browser
AA seq
1872 aa
AA seq
DB search
MNKQQSKETLKEKVKGIFGLGTQRQQTKQCDSKLPEFIITADIIKELHPDCGLSNRIRMM
NQICDLAKIKKFEENAVEAVWKAVEDMLSPEQPPEARHAVLQLLRAIIQGQGEWLGPLRA
YFFKVIRDYQPCNEDLSERLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKYNSCYLDQNVSSMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSESLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQMIGSAELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKRPD
ASVLTLVSYRAQSIQPAKDGWIQSLHCLMEKFFRNETRSGIRIKVLHILSFVLSTNRQLY
EDELIEKVVILQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVASRSLV
CSGSLEASDPTADSPMEDVKTAVLGLLEILQSKLYSLPASHASRVYELLISHLQLHYKNK
YCSAIASAVRLQVFDFFLMMRADSLHRVGVPNKDGMMRFSPYCYCDAGEPEKRVCDKKPS
GSISPPAGGPAAAAAAPPASAASIRSACLPYAPAFSVLLQCLKMETDWKVMKLVLDKLPW
MLQYKVLLLTSSCSLDQLCSTLCTMVTDRQISERLRKMPEGFSRTDVQLAVVPVLTAITS
YHSYLDQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTHISA
TVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIAM
WFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSPFRARSTSLNERPKSLRAGKVAKP
AASVANSSSSPVKELRDLSAMEAFRSRSISVSEHAVRRMHTSTTTCSLGSADENAVTQAD
EGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITTS
GGVRTQALLGMDMSERLGGGGAGGGEMTRSDPSLHTRMTKEAPAKLESQSSQQQNRTTRT
RVRSRSGGHALRAGPIPSLSPLVSPSEGELASPLSPSSGPTLDGVGPPSSTAAALSAPPP
LKDNPSLAEFVPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSTVLM
AMEGVKEPPTQTASAPTSTAAPAPTSASEPLTQTHSSAGGKANPFHRSSTDSVVVPEEGS
GVTAESAPLDWVEGEEFEPIPTEPIFMSDKAPLPGPLSRSSSTSSQDDEKSTLEEVSEGA
IPIDQPSVGPSTPGSQGPDLPFQSHSQSQGHGLNKSSSSPELQTLPEAFTKAALESEKSQ
GDAAARPRAPSDGKPQALQQPCSDKVKVEGSTGADFNGPGGPAQGGEGSGLPSQSGGAAM
KLAFPAAPALPGPISPGGGHRPRGHTISVSAPSSRRERKTERDSYHSRPGPSNTEKISGL
SPSFVFLQLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVGAGQVN
NEVAILSNEYGSNRYAGFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQ
AIFHIATLMPNRESDKGCCNKKRHIGNDFVMVVYNDSGEDYKLGTIKGQFNFVEVVIKPL
DYECNLVSLQCRKDLEGLVDTTVAKIVSDRNLPLLVRQMALHANMASLVHQYRANPSDAY
ASKWLARLRHIKRIRTRAQEDIQSRSTPGISLTQGHTQQNKAFQQGASGPTPETSGQRKR
LVSTVDDFTDFV
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcagcaaagcaaagaaacgctcaaagaaaaagtgaaggggatctttgggctc
gggacgcaacggcagcaaacgaagcagtgcgactcaaagctgccagagtttataatcaca
gccgacataataaaggaactgcatcctgattgtggcctgagcaaccgcatccggatgatg
aaccaaatctgcgatctggctaaaatcaaaaaattcgaagagaatgcagtggaggctgtg
tggaaagccgtggaggacatgctgtccccggagcagccgccagaggcccgacacgcggtc
ctgcagctcctcagggccatcatacaaggacagggtgagtggctcggtcctctgagggcg
tacttttttaaggtgatcagagactaccaaccctgcaacgaggacctttcagaaagactg
gaggtgttcaaggctttgactgaaaacgggaaggatatcacatacttggaggaggacata
gcacggtttgtcctcctgtggatggacataggtctcacctcagactttctccatgttctt
gtgaatttggtcaagtacaacagctgctatctggatcagaacgtctccagcatggtgcag
aaaatctgtcttctgtgcaacagaacaacgtcatccactgacatagaggtggcgctgcag
gtcctggatgccgtcgtgtgctacaactgcctgccctccgagtccctcaccgtcttcatc
ataacactctgccgtacggttaacgtgaaggagttctgtgaatcctgctggaagctgatg
aggaaggttctggggacgcatctgggccacagcgctatttacaccatgtgccgcatcatg
gaggagagggtgtacatggaggacgctccactgctgagaggagccgtgttctttgtggga
atggctctgtggggcgcccacagactgcctgctctaaaaaacacaccaacactagtgctg
ccgtctttctacaaggccatgtcatgtgccaacgaggtggtgtcgtatgagatcgtcctc
tccatcaccaggctgattaagaaatacggcaaggagctccaggttgtcacatgggacatc
ctgctgggcatcatagagcggctgctgcagcagattcagatgataggcagcgcagagttg
aaggccatcgtttatgagcttctgaccacagtggaagagctgtatgagcagaacggctac
cacggctccacggagaagttcttcagtctggtggagaaatgtgcagacaagagacccgac
gcctcggtgctgaccctcgtctcgtacagagcacagtccattcagcccgcgaaggatggc
tggattcagagcctccactgcctgatggagaaattcttcagaaacgagacgcgcagtggc
atcaggatcaaagttcttcacatcctgtcgttcgttctgagtactaatcgccagctctac
gaggacgagctaattgagaaggtggtgatccttcagctcagtgggattgctgaagaccgg
gacctggcggtcagaaagcaggccacccagctgctggtggacctcgctgagggctgcaac
acgcatcacttcaccagcctcctggacatcatcgagcgggtggccagtcgctctctggtt
tgctctggatccctggaggcttctgaccccacagctgactctcccatggaggatgtcaag
actgcagtgctggggctgctggagatcctgcagagcaaactttacagcctgccagccagc
catgccagtcgtgtttatgagctgcttatcagccacttgcagctccactacaagaacaag
tactgctcagctatcgcttctgctgttaggctgcaggtgtttgacttcttcctgatgatg
cgtgccgactctctgcaccgcgtcggggtgcccaacaaggacggaatgatgaggttcagc
ccttactgctactgtgatgctggggagccagagaagcgggtttgcgataagaagccgtct
ggttccatatcgccccctgctggcggtccggcggcggctgctgcggctcctcctgcttca
gcagcctccatccggtcagcctgtcttccctacgcgcctgccttcagcgtcctgctgcag
tgcctcaagatggaaactgactggaaggtgatgaaacttgttctggacaaactgccttgg
atgctgcagtacaaagtgctgctgctcacctcgtcatgcagcttggaccagctctgttcc
acactctgcaccatggtgacggaccgtcagatctcggagcgtttgagaaagatgcccgag
ggtttttcccgcacagacgtccagctggctgtggttcccgttctcacggcgataacctct
taccatagctacctggaccagtccagacagagagagttggttcagtgtctggagaccggc
ctcatctatcgctgtgccaagcagtgtgtggtggctctgacgatgtgcacagtggagatg
cctgacatcatgatcaagcttctcccggctcttatagtcaagctcacccacatctctgct
accgttgccatggcgtctcccatgctggagtttctctccactctggtgcgcttgccccat
ctgtacgccaactttgtagccgagcagtacgtaagcgtgttcgccatctcgctgccctac
actaatccgtccaaattcaatcaatacatcgtatccctggcccatcatgtgatcgccatg
tggttcatacgctgcagactccccttccgcaaggactttgttcagtacatcaccaagggc
ttgcgctccaacgccttgcttccgtttgacgacggacacgagcaaagccctttccgcgcg
cggagcaccagcctcaacgagagacccaaaagcctgcgggctggaaaagtggcaaagccg
gcagcatctgtagccaatagcagcagctctccagttaaagagctgagggacctttcggcc
atggaggctttccgctcccgcagcatcagcgtctccgaacacgcggttcgcaggatgcac
acttctaccacgacctgcagtctgggctctgccgatgaaaatgcagtgactcaggccgat
gagggactcaagaccgtccacctggagctcacggagacgtgtctggacatgatggcgcga
tacgtgttctcaaacttctctgctctgccaaagaggtctccgatcgctgagtttctatta
gccggaggtcgcagcatgacctggttggtgggcaacaagcttgtcaccatcacaacgagt
ggcggtgtcagaacgcaagcgttgctgggaatggatatgtcggagcgtctgggaggagga
ggagcaggaggaggagaaatgaccaggtcagatccgtctcttcacacccgaatgactaaa
gaggctccggccaaactggagtcgcagtccagtcagcaacagaacagaacaacccggacc
cgagtccgctccaggtcgggtggtcacgctctgcgtgccggtcctattccgagtctcagt
cctctggtttccccctctgagggagagttggcctctcctctgtctccttcctctggcccc
accctggatggcgtcggtcctccctcctccacagctgccgctctgtccgcccctcctccg
ctcaaagacaaccccagcctcgccgagtttgttccaatgctcactcagggctgggcagag
atcttcatacggaggccctcaggtaacaccagctggctgatgtgtctggagaacccaccc
agccccttctcctctgagctgggcaacatgccgctgcaggagctctccaccgtcctgatg
gcgatggagggagtgaaggagcctcccactcagacagccagcgctccgaccagcacggcc
gccccagcgccaacgtctgcctccgaaccgctcactcaaacacacagcagtgccggagga
aaggccaacccttttcatcgctccagcaccgactcggtggtggttcccgaggagggttca
ggggtcacagcagagagcgcccctctcgactgggtagagggtgaagagtttgagccgatt
cccaccgagcccatattcatgtccgacaaggctccgcttcccggaccgctcagcaggtcc
tcctccacctccagtcaggatgatgaaaaatccactctggaggaggtgagcgaaggagcg
attcccatcgatcagcccagcgttggcccctccaccccgggcagccagggccccgatctt
ccttttcagagccactctcagtcccagggtcacggactgaacaagtcgagctcctccccg
gagctgcagacgctgccggaggccttcaccaaggcagcgctggagtctgagaaaagtcag
ggagacgccgccgctcggcccagagcgccctcagatggcaagcctcaggcactgcagcag
ccctgctcagacaaggtcaaagtagaggggagcaccggggcggactttaatggaccagga
ggtccggcccagggtggtgagggctccggcttgccgtctcagagtggaggagctgccatg
aagttggcttttcctgcagcgccagctctgcctggacccatctctcccggcggaggccac
cgaccccgaggtcacaccatctccgtctccgccccgtcctccaggagagagaggaagacc
gagagggactcgtatcacagccgacccgggcccagcaacacagagaagatctccggactg
agtcccagctttgtcttccttcagctctatcactctcctttctttgggaatgaagccaat
aagccgctgctgctgcccaaaactcaggtgattgaccgggctgtgaaggttctggaccag
atgcctccttatgatacccataagattggagttgtgtttgttggagctggccaggttaac
aatgaagttgccatcctgtccaacgaatacgggtcgaaccgctacgccggcttcctcaca
ggcctcggcaaactaatccacctgaaggactgcgaccccgaccagatcttcctgggcggg
ctggatcagtacggggacgacggagagttcacctactgttggcacgacgacatcatgcag
gccatcttccacatagccacgctgatgccgaacagagagagcgacaagggctgctgcaac
aagaagcgacacatcggcaacgactttgtcatggtggtctacaacgactcgggagaagat
tacaaactgggcaccataaagggtcaatttaatttcgtcgaagttgttattaagccactg
gactatgaatgtaaccttgtgtctctgcagtgtcggaaagacctggagggcctggttgac
accactgtcgcaaaaatcgtatctgaccgcaacttgccactcttagttcgacagatggct
ctgcatgcaaatatggcttctttggtgcatcagtacagagcgaatccctcggatgcttac
gcttccaagtggctggccagattacgacacataaagaggatcaggaccagagctcaggaa
gacatccagtcccgttcgactccaggaatctcgctcacccaaggacacactcagcaaaat
aaagcatttcaacaaggagcttcaggtccgactcctgagacgtcgggacagagaaaaaga
cttgtttcaacggtggacgactttactgattttgtttga
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integrated database retrieval system