Gambusia affinis (western mosquitofish): 122829652
Help
Entry
122829652 CDS
T07758
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122829652 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122829652 (exosc1)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122829652 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122829652 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
122829652
NCBI-ProteinID:
XP_043970336
LinkDB
All DBs
Position
LG04:complement(21663833..21672406)
Genome browser
AA seq
204 aa
AA seq
DB search
MRRLSALPENMSPMRLCVPGEKLCSVEDCNQGTGVYQRHGYIYSSLAGYVMRKNEGEELP
VISVVRETEALLLPDVGAIVTCKVTGINSRFAKVHILYVGSTPLKDRFRGTIRKEDVRES
EKDKVDIYKSFRPGDIVLAKVISLGDVQSTYLLTTAENELGVVVAHSEAGAQMIPISWRE
MQCPQTNIKEFRKVARVQPEYLEA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggctctctgctcttcccgaaaacatgtcgcccatgagattgtgtgtcccaggt
gagaaactgtgcagtgtagaagactgtaatcaaggcactggagtgtatcagcgacatggc
tacatctactcctcccttgctggctacgtaatgaggaagaacgagggagaggagctaccg
gtgatctcagtggtgagggaaactgaagcactgctgctgccagatgttggagccatcgtc
acctgcaaggtgactggcatcaactccaggtttgcgaaggtccacatcctctacgtgggg
tccacgccgctgaaagaccgcttcagagggaccatcagaaaggaagacgtgagagagtcg
gagaaagacaaggtggacatatacaaaagcttcagacctggtgacattgtcctggcaaaa
gtgatttcgctcggggacgttcagtctacctacctgttgacaacagctgagaacgaactg
ggcgtggtggtggctcacagcgaagcaggtgcccagatgattcccatcagctggcgtgag
atgcagtgcccgcagaccaacattaaggagtttcgtaaagtggcccgagttcagcctgag
tatctggaggcctga
DBGET
integrated database retrieval system
