KEGG   Gambusia affinis (western mosquitofish): 122829700
Entry
122829700         CDS       T07758                                 
Symbol
samd1b
Name
(RefSeq) atherin
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gaf03036]
    122829700 (samd1b)
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     122829700 (samd1b)
SSDB
Motif
Pfam: SAMD1_SHD SAMD1_WH SAM_1 SAM_2 SAM_PNT
Other DBs
NCBI-GeneID: 122829700
NCBI-ProteinID: XP_043970390
LinkDB
Position
LG04:22523940..22540495
AA seq 645 aa
MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKRSEFGGGADAPRERTKPDHPNNNNGDSAHSFTDPEEGET
EPDPRAETSVSSRNKKLQPASSPGSGNGCLSCGATTSCAVGSGCEEEKASATRDKGLGQQ
GAGGCLPLGSGTGDRSEDVPSGGGKKPCLSGADSRSQTYSGSDSPAQTQRQTESGQPKLR
LGGGTTKAAHRHANSELRELAALSEKPLRAAGGGCGGSAAATRGHVKPLGLKEILGYLSS
QERLSEEKLTRGKVKVVMEREVERGRLRRTRCGNITLPLRGMEPDEPEPSDSSADRLAKS
ALQDKRAAKKSPPPARPESEPMETGGEGEEGQGGDEEEKDNDEDDNGPRSSDEDGGLSPV
AMTTEAGLAEKTGEDAGFQREVQEESPQRQREYGKGMCELDFPPESRSPPTDGASWSECN
GACSEEGAFSSDHLGYTHHDEINLTASSFHNLEYKTEIGTSSCMLTPTASPRDSSLPEEQ
GANDSSGGHMKFGSTRVSPMEWTVSDVVSYFTAVGFPEQAAAFRAQEIDGKSLLLMQRND
VLTGLSIKLGPALKIYERHIKVLQKTHFEDNDGYEDAKNTLRLLC
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgtccgagcccaacaagtaccgagagtggatcctggaaactatcgactctctccgttcg
aggaaagcccgtccggatctagaaaggatttgtcgaatggtccggaggcgacacggatca
gacccagaccgaaccaggacggagctggaaaaactcatccaggagcagacggtgctcaaa
gttagctacaagggatcgatatcgtaccgaaacgcggccaaggtgcagaggaaaagcaga
aaacggagcgagttcggcggcggcgcggatgcaccgagggagcggaccaaacccgatcat
ccgaacaacaacaacggcgacagcgcgcacagcttcaccgacccggaggagggcgagacg
gagccggatccccgcgccgaaacatcagtcagcagtcgaaacaaaaagctccagcctgcc
tccagccctggtagcggaaacgggtgcctcagttgtggcgcaacaacgagctgcgctgtc
gggagcggctgtgaagaggagaaagcaagtgcaacgagagacaagggattaggacagcag
ggagcggggggctgcctgccgctcggttcgggcaccggagaccggagtgaggatgttcca
tccggcggaggaaagaagccctgtctgtctggagctgacagccgaagccaaacttactcc
gggagcgacagcccagcccagacacagaggcagaccgagtctggccagcccaaacttcga
ctcggaggaggaaccaccaaagcagcgcaccgccacgccaactccgagctgcgcgaactg
gcagctctgtccgagaagcccctccgagcggcaggagggggatgtgggggctccgccgcc
gcgacccgaggccacgtgaagccgctgggcttgaaggagatcttgggctacctgagcagc
caggagcggctgtcggaggagaagctgacccgaggcaaagtcaaagtggtgatggagaga
gaggtggagaggggcaggctgcgcaggacgcgctgcgggaacatcactcttcctctgcgg
gggatggagccggacgagcccgagccgagtgattcgtctgccgacagacttgcgaaaagc
gcactgcaggacaagcgcgcagcgaaaaagtccccacctccagcccgtccggagagtgag
cccatggaaactggcggggagggagaggagggacagggaggagatgaggaagagaaagac
aatgatgaagatgataatggtcccaggagttctgatgaggatggaggactttccccggta
gccatgacaaccgaagctggacttgctgagaaaaccggagaagatgcgggctttcagagg
gaggtgcaggaggagagccctcagcggcagagggagtatggaaaagggatgtgtgagctt
gattttcctccagagtcccggtctccacctaccgacggagcctcgtggtccgagtgtaac
ggtgcctgctccgaggagggagctttctcctcagaccacctgggctacacacaccatgat
gaaataaacctcaccgcctcaagctttcacaacttggagtataaaacagagatcggcact
tcgtcctgcatgctcactcctaccgcatctccgagggactccagcctccccgaagaacaa
ggcgctaacgacagcagtggagggcacatgaagtttggcagcaccagagtaagcccaatg
gagtggaccgtgtctgacgtggtcagttatttcacagccgtgggtttccccgagcaggcg
gccgccttcagggcacaggaaatcgacgggaagtctctcctcctcatgcaacgcaacgac
gttttgaccggcctgtcgatcaaactcggacccgccctcaagatctacgagcgtcacatc
aaggttctgcagaaaacacactttgaggacaatgacggctacgaagatgcaaaaaataca
ctcagactgttatgttaa

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