Gambusia affinis (western mosquitofish): 122829700
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Entry
122829700 CDS
T07758
Symbol
samd1b
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122829700 (samd1b)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
122829700 (samd1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
122829700
NCBI-ProteinID:
XP_043970390
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Position
LG04:22523940..22540495
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AA seq
645 aa
AA seq
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MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKRSEFGGGADAPRERTKPDHPNNNNGDSAHSFTDPEEGET
EPDPRAETSVSSRNKKLQPASSPGSGNGCLSCGATTSCAVGSGCEEEKASATRDKGLGQQ
GAGGCLPLGSGTGDRSEDVPSGGGKKPCLSGADSRSQTYSGSDSPAQTQRQTESGQPKLR
LGGGTTKAAHRHANSELRELAALSEKPLRAAGGGCGGSAAATRGHVKPLGLKEILGYLSS
QERLSEEKLTRGKVKVVMEREVERGRLRRTRCGNITLPLRGMEPDEPEPSDSSADRLAKS
ALQDKRAAKKSPPPARPESEPMETGGEGEEGQGGDEEEKDNDEDDNGPRSSDEDGGLSPV
AMTTEAGLAEKTGEDAGFQREVQEESPQRQREYGKGMCELDFPPESRSPPTDGASWSECN
GACSEEGAFSSDHLGYTHHDEINLTASSFHNLEYKTEIGTSSCMLTPTASPRDSSLPEEQ
GANDSSGGHMKFGSTRVSPMEWTVSDVVSYFTAVGFPEQAAAFRAQEIDGKSLLLMQRND
VLTGLSIKLGPALKIYERHIKVLQKTHFEDNDGYEDAKNTLRLLC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaacaagtaccgagagtggatcctggaaactatcgactctctccgttcg
aggaaagcccgtccggatctagaaaggatttgtcgaatggtccggaggcgacacggatca
gacccagaccgaaccaggacggagctggaaaaactcatccaggagcagacggtgctcaaa
gttagctacaagggatcgatatcgtaccgaaacgcggccaaggtgcagaggaaaagcaga
aaacggagcgagttcggcggcggcgcggatgcaccgagggagcggaccaaacccgatcat
ccgaacaacaacaacggcgacagcgcgcacagcttcaccgacccggaggagggcgagacg
gagccggatccccgcgccgaaacatcagtcagcagtcgaaacaaaaagctccagcctgcc
tccagccctggtagcggaaacgggtgcctcagttgtggcgcaacaacgagctgcgctgtc
gggagcggctgtgaagaggagaaagcaagtgcaacgagagacaagggattaggacagcag
ggagcggggggctgcctgccgctcggttcgggcaccggagaccggagtgaggatgttcca
tccggcggaggaaagaagccctgtctgtctggagctgacagccgaagccaaacttactcc
gggagcgacagcccagcccagacacagaggcagaccgagtctggccagcccaaacttcga
ctcggaggaggaaccaccaaagcagcgcaccgccacgccaactccgagctgcgcgaactg
gcagctctgtccgagaagcccctccgagcggcaggagggggatgtgggggctccgccgcc
gcgacccgaggccacgtgaagccgctgggcttgaaggagatcttgggctacctgagcagc
caggagcggctgtcggaggagaagctgacccgaggcaaagtcaaagtggtgatggagaga
gaggtggagaggggcaggctgcgcaggacgcgctgcgggaacatcactcttcctctgcgg
gggatggagccggacgagcccgagccgagtgattcgtctgccgacagacttgcgaaaagc
gcactgcaggacaagcgcgcagcgaaaaagtccccacctccagcccgtccggagagtgag
cccatggaaactggcggggagggagaggagggacagggaggagatgaggaagagaaagac
aatgatgaagatgataatggtcccaggagttctgatgaggatggaggactttccccggta
gccatgacaaccgaagctggacttgctgagaaaaccggagaagatgcgggctttcagagg
gaggtgcaggaggagagccctcagcggcagagggagtatggaaaagggatgtgtgagctt
gattttcctccagagtcccggtctccacctaccgacggagcctcgtggtccgagtgtaac
ggtgcctgctccgaggagggagctttctcctcagaccacctgggctacacacaccatgat
gaaataaacctcaccgcctcaagctttcacaacttggagtataaaacagagatcggcact
tcgtcctgcatgctcactcctaccgcatctccgagggactccagcctccccgaagaacaa
ggcgctaacgacagcagtggagggcacatgaagtttggcagcaccagagtaagcccaatg
gagtggaccgtgtctgacgtggtcagttatttcacagccgtgggtttccccgagcaggcg
gccgccttcagggcacaggaaatcgacgggaagtctctcctcctcatgcaacgcaacgac
gttttgaccggcctgtcgatcaaactcggacccgccctcaagatctacgagcgtcacatc
aaggttctgcagaaaacacactttgaggacaatgacggctacgaagatgcaaaaaataca
ctcagactgttatgttaa
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