Gambusia affinis (western mosquitofish): 122829758
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Entry
122829758 CDS
T07758
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
122829758 (shoc2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
Motif
Other DBs
NCBI-GeneID:
122829758
NCBI-ProteinID:
XP_043970503
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Position
LG04:23630872..23648738
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AA seq
582 aa
AA seq
DB search
MSSTLGKDKDSKEKDPKGGPAGKEREKEAKTLSSLVKDGGKETKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAQGTRKKSSNAEVIKELNKCREENSTRLDLSKRSIHMLPTAIK
ELTQLTELYLYSNKLQSLPAELGCLSELVTLALSENSLTSLPDSLDSLKMLRMLDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
KSLAKCRELEELNLENNNISVLPEGLLSSLLNLTSLTLARNCFQSYPVGGPSQFSTIYTL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLNKIPED
ICGLMSLEVLILSNNLLKKLPHGIGSLRKLRELDLEENKLECLPHEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPHLHSLPFELALC
SKLSIMSIENCPLTHLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagacaaagattcaaaagaaaaggaccccaaaggcggtccg
gctggtaaagaaagggaaaaagaggccaagactttatccagcttagtcaaagatggtgga
aaagaaacaaagaccaaagggaaagacgccaaagaaggaaagaaggacacgagcagctcg
acgccgggtgttgccttctctgttgacaacacgataaagcggccaaacccagcacaaggt
acacgcaagaaatccagcaacgcggaggtcatcaaggagctcaataaatgtcgggaggag
aactctacgagactggacctgtccaagcggtccattcacatgctgcccactgctattaag
gagttgactcagttgacagaactctatttatacagcaacaagctgcagagcctaccggcg
gagctgggctgtctgtcggagctggtcactttagccctcagcgagaactccctgaccagt
ctgcccgactccctggactcgctgaagatgctccggatgctcgacctccggcacaacaag
ctccgagagataccgcccgtcgtctaccggctgacgtctttgaccacgctgtacctgcgc
ttcaaccgcatcaccacggtggagaaggacatccgcaacctgtccaagctcaccatgctg
agcatccgggagaacaagattaaacagctaccagcagaaataggggagctctgcaacctc
ataactctggatgttgcccataatcagttggaacatctaccgaaggagattggaaattgc
acacaaataaccaaccttgacctgcagcacaacgagctcttggacctcccagagactata
ggcaatttggcaagcataaatcgtttaggactgcgatataaccgattgtcagccatcccc
aagtcgttagccaaatgtcgagagctggaggagcttaacctcgaaaacaacaacatttca
gtattgccagagggcctgctgtcgagtttgctaaatttgacgagtctcacactggcgagg
aactgcttccagtcgtaccctgtgggcggaccctcccagttctccaccatttacaccctc
aacatggagcacaaccgtatcaacaagatcccattcggtatcttctccagggccaaagtg
ttgagcaagcttaacatgaaggacaaccagctaacggcgctgccgttggatttcggtaca
tggactagcatggttgaacttaacctcgccactaatcagctgaataaaatcccagaagac
atctgtgggcttatgtctctagaggtattaatactttccaataatcttctgaagaagcta
ccgcacggtattggaagtttgagaaagttacgagaacttgacttggaggaaaacaagcta
gagtgtctaccgcatgaaatcgcttaccttaaagatttacagaaattggtgttgactaat
aatcagctgactacgctaccaagaggcatcggtcacctcaccaacctgactcaccttggt
ttgggagagaacctgctgcaacaccttcctgaggagatcggcacactggagaatctggag
gaactgtacctcaacgacaacccccacctgcacagcctcccgtttgagctggctctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcacccacctgccggcccagatc
gttgcaggaggcccttctttcatcatccagttcctaaagatgcagggaccataccgtgcc
atggtctga
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