Gambusia affinis (western mosquitofish): 122829792
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Entry
122829792 CDS
T07758
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf02010
ABC transporters
gaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122829792
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122829792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaf02000
]
122829792
Transporters [BR:
gaf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122829792
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
122829792
NCBI-ProteinID:
XP_043970574
LinkDB
All DBs
Position
LG04:complement(24156008..24191961)
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AA seq
2270 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRMYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGETPGIVGNFNDSIISRLFNDAKKILLYTQNDK
SYEGYRGMLGALRKLQKNPARFKLKDFLKDDETLSHFLHHNASLSHHTLKQILEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADRNVSHLTQEIICQSSSNWLNKAQNHFLSNLDF
LKPIWKDVSSDPKAVQDVSAATNNLLESLGALGVELASMKSWKDMRKEILYLTANSTGSP
KQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGYHGNDSDSEPMSTYDNSSTPYC
NNLMKNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPKFWSFMENSDEMDLVRSLLQSNTSAAFLDAQLSETEWSVSDVADFLTKASEDRR
PSGSAYTWRDAFNETDRAIKTISQFMECVNLDKLESVPNEERLVNKSMGLLNNQKFWAGI
VFPNIAPNSTDLPPNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSYL
QDVIEQGIIRAITGTVEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDSG
VVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
LVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENQNMNTPLSKKGNADAVCIEEDPSHI
DPGVYIENLVKIYSHGNKLAVDGLTLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQI
VNDVGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRQARTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDYD
LSLQSCRNSASTVSYVKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISSVIFKHVSE
ARLVEDLGHEITYVLPHQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAE
DSGVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDLDFNDSEGDPESRETDWLGGAD
GKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLALHPSMYGEQFTFISNDIPEEPHNNKLLGALMDKPGFGTRCMEGEPIPNTPCVEV
KDDWTLPQVSQSVSDIFDKGNWTMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQMMIS
DKDTLQNLTGRNVSDYLVKTYAQIIGKSLNNKIWVNEFRYGGFSLGARGSHALSHTGDID
EAIVQLRQLFQLEQGTAAYRFFSSLSDFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNA
ILRSSLKPGQDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVTKAKHMQFISGVQPLLYWLANFIWDMCNYIVPATLVIIIFVCFQQDAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAIEGVIFFCITVLIQYRFCFKARSSTGHLKPIGEEDEDVARERQRILSGSGQLDIL
ELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSDVTSGEAYL
AGKSVNTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKL
GLIKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDL
RLVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEALSIEDYSVSQTT
LDQVFVNFAKDQSDEDHLKDLHLSKRDAVVVDLSQLNSFLTDSKTRESCV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgggtctactgctatggaagaacttcacctacagacgaaga
caaaccatccagctgctgattgaaatcatttggcccttgtttatcttcttcatcctgata
tcagtccggatgtattatcctccctatgaacaacatgaatgccactttcctaacaaggcc
atgccctcagcaggtaccctgccctgggtacaaggcattatctgtaatgccaacaatccc
tgctttcgtaatccgacccctggagagactccagggatagttggaaattttaatgactcc
ataatttcccgtctgtttaacgatgccaagaagattcttctgtacacccagaatgacaag
agctatgaaggctaccggggaatgctgggagccctcagaaagcttcagaagaaccctgct
cggttcaagctgaaagacttcttgaaagacgacgaaacgctttctcacttcctgcaccac
aacgcatcgctctctcatcacacgttgaagcaaattttggaggctgacgtcaatttggag
aaggtgctcacgaaaggttttggattccatctcagagatctttgcaacacaacaccgctg
gaggagtttgtccacattgcagaccgtaacgtgtcccacttgacccaagagatcatctgc
caatcatccagtaactggctgaacaaggctcagaaccacttcctctccaatctggacttt
ctgaaaccgatttggaaggatgtgagttcagaccccaaagctgtccaagacgtctcggct
gcaaccaacaacctcctggagagcctcggcgcgcttggtgttgagcttgccagcatgaag
agctggaaagacatgagaaaggagatcctgtatctgactgcaaactcaacaggatctccg
aagcagatgtaccaggccgtgtcgcgtatcgtttgcggacatccagagggaggcggcctg
aagatcaaatccctcaactggtacgaagacaacaattacaaggctctgttcggataccac
ggcaacgacagcgacagtgagcccatgtccacatatgacaactcttcaactccttactgt
aacaacctgatgaagaacctggagtccagccccatttctaggatgatttggagagccctc
aaacctcttctaatggggaagatcctgtataccccagacactccagcaacacagaggatc
attcacgaggttaacaagaccttccaggagctgggggtgctgagagatctgggcggcatg
tgggaagaaatgaaaccaaaattttggagtttcatggagaacagcgacgagatggactta
gtcaggtccctgctccaaagcaacaccagcgctgctttcctggacgctcagctcagtgag
accgagtggagtgtgtccgacgtggcggacttcctcacaaaagcctcagaggaccgcaga
ccttcagggtcagcttacacatggagggacgcgttcaatgaaaccgatcgtgccataaag
actatttcacagtttatggagtgtgtgaacttggacaaactggagtcagtccccaacgag
gagcgcttggtcaacaagtctatgggtcttctgaataaccagaagttctgggcgggaatc
gtgtttcccaacatcgctcccaatagcaccgacctgcctcccaacatcaactacaaaatc
cgcatggacatcgataatgtggagaggacgaacaagatcaaagacggatactgggatcct
ggtcccagagcggacccctttgaggacctgcggtacgtctggggcggattttcttacctc
caggacgtcattgagcaaggaatcatccgagccatcactggtactgtggagaagacgggc
atttacatccagcagatgccctacccctgctatgttgatgatatattcctgcgagttatg
agccggtcgatgcctctcttcatgactttggcctggatgtactctgtggccatcatcatc
aaaggggtggtgtatgagaaagaggcgcgactgaaggagaccatgaggatcatgggactg
aacaacggcaccctgtggctgagctggttcatcagcagtttaatcccactgctgatcagt
gccggcttactggtgatgttgctgaagatgggaaacctattgccgtacagcgactctggc
gttgtgtttcttttcctgggatccttcggtgttgtaaccatcatgcagtgttttctgatc
agcactctgttttctcgtgccaacctggcggcggcctgcggaggaataatatacttcacc
ctctacctgccctacgttctctgtgttgcttggcaagattacgtgggatttggagcaaaa
cttgtagtgagtcttctgtcccctgtggcttttggcttcggctgtgagtactttgccctg
tttgaggaacaaggtgtgggaatccagtggtctaaccttctagcaagccccctggaggag
gacagctacaacctgaccacctctatatgcctcatgctgttcgacgcagtgctgtacgga
ataatgacttggtacatcgaagctgtttttcctggtcaatacgggatccccaggccttgg
tatttccctttcacaagaacatattggtgcggagagaaggagaatcaaaacatgaatact
cctctgtcaaagaagggcaacgctgacgctgtgtgcatcgaggaggacccaagccacatc
gacccgggtgtctacattgaaaacctggtgaagatctacagccatggaaacaagctggct
gtggacggattgacccttaaattctacgaaggccagatcacttccttcctgggccacaac
ggagctggcaagactacaaccatgtcaatcctgaccggactgttcccacccacctctggt
actgcctacatcctcggcaaggacatccgctccgagctcagcaccatcaggcagaacctg
ggggtctgcccccagcacaatgtgcttttcagcatgttgaccgtcgaggagcacatctgg
ttctacgctcgcctgaagggcctgtccgaagagaaagtgaaggctgaaatggaacagatc
gtcaacgatgtcggactgccacacaagcgaaagtctcgcactagcacgctgtcaggtgga
atgcagaggaagttgtctgtagcgctggcgtttgtcggaggttctaaggtcgtcattctg
gacgagcctactgctggtgttgatccgtacgcacgcaggggaatctgggatctgctcctc
aaatacagacaagcccgcaccatcatcctttccacccaccacatggatgaggctgacatc
ctgggcgaccgtattgctatcatttcccatggcaagctgtgctgcgtgggctcctctctc
ttcctgaagactcacctcggaaccggctactacctgacgctggtgaagagagactacgac
ctgtctctacagtcctgcaggaattctgccagcaccgtctcctacgtgaaaaagacagag
aaggaggacagcgtatcagagagcagttcagatgctggtcttggcagcgaacctgaaagt
gagactaccactattgacgtctccctcatctccagtgtgattttcaaacacgtctcagag
gctcgtctggtggaagatctcggccatgagatcacctacgtcttgccgcaccagtcggct
aaagacggtgcctttgttgagcttttccatgagcttgatgatcgacttactgacttagga
atctcaagttacgggatttctgacaccaccttggaagagattttcctgaaagtggcagaa
gatagcggtgttgattcggttgagctttcagatggagtcgtaccaaccagaacgcgacgg
cgacatgcttttggagaccaccagagctgcctgaagcccttcaccgaggatgacttggac
ttcaatgactctgaaggtgacccagaatctcgtgagactgactggcttggtggagcagat
ggcaaaggttcatatcaggtcaaaggctggagtctgaagagacagcagtttgttgcgctc
ctgtggaaacggttcctctacgctcgccgctctaggaaaggctttttcgctcagattgtt
ctgccagcagtgtttgtgtgtattgcactggtgttcagcctcattgttcctccgttcggg
aagtacccgagtctggctctgcatcccagcatgtatggagagcagttcaccttcatcagt
aatgacatacctgaagaaccccacaacaacaaactgctgggagctttgatggacaaacca
ggatttggaacccgatgcatggaaggagagcccataccgaacactccctgtgtggaggtg
aaggatgattggacgctccctcaagtttctcaaagtgtcagtgacatattcgacaaaggc
aactggaccatggagaacccgtctccactgtgtgagtgcagctgtgaaggccgtaagagg
atgctgcccgagtgtcccgctggggccggtggacttccaccgccacagatgatgatcagt
gacaaagacaccctgcagaatttgactggtagaaacgtgtcggactacctggtcaaaacc
tacgctcagatcatcggcaagagcttgaataacaagatctgggtcaacgagttcagatac
ggtggattctctctgggcgcccgaggttcccatgctttgtcccacacaggtgatattgat
gaagctattgtgcaactgaggcaactcttccaactcgaacagggaacggcagcctatcgt
tttttcagcagtctctctgattttatccaaggattggacacaaagaataacgttaagatt
tggtttaacaacaagggctggcacagcattggctccttcctcaatgtgatgaacaacgcc
attctgcggtcgagtctcaaacctggtcaagacccgacaaagtttggcatcaccgcttac
aaccatccactaaacctcaccaaggagcagctctcacaagtggcactgatgacgacatct
gtggacgtgttggtgtccatttgcgtcatcttcgccatgtcctttgtccctgccagtttt
gtggttttcctcatccaggagagagtaacaaaggccaaacatatgcagttcatcagtggc
gtgcagcccttgctctactggctggccaactttatttgggatatgtgtaactacatcgtt
ccagctacactagtgatcatcatatttgtctgtttccaacaagacgcctacgtttcttcc
accaatctaccagtactggctctgctgcttctcctctatgggtggtcaatcacccctctg
atgtacccagcctctttcttctttaagatccccagcactgcctacgtagttctaaccagt
gtcaacatactgattggaatcaatggcagtgtgtccacgtttgtcctggagttgtttgga
agcaatgagatcggtggtattaatgacatcttgaagaatgtattcctcatcttcccgcac
ttctgcctgggtagaggactgattgacatggtgaagaatcaagccatggctgatgctttg
gagagatttggtgaaaaccggtttcgctctcctctggcatgggacatggtgggaaagaac
ctgttcgccatggcaatagagggagttattttcttctgcatcaccgtcctcattcagtac
cgcttctgctttaaagccagatcctccaccggccatctgaaaccaattggagaagaggat
gaagacgttgccagagagcgacagaggatcctgagtggcagtggacagttagacattctt
gagctgaggcagctcaccaagatttacaagcggaaacagaagccggccgtggaccggctg
tgtgttggcatccctcccggagagtgttttggtttgcttggggtcaatggagcaggaaag
accagcaccttcaaaatgttgactggagactcggatgtgaccagcggtgaggcctactta
gctggcaagagcgtaaacacagaaataaacgaggtgcatcagaacatgggctattgtcct
cagtttgatgctatcaatgaccttctgactggaagagagcacctcgagttctatgccatc
ttgagaggagtacctgagaaggaagtctgcgaggtggcagagtgggggatacggaaactg
ggattgatcaagtatgtggacaaagcagcagggagctatagtggaggaaacatgaggaaa
ctctccactgccattgcactcataggaggaccccctgttgtgtttttggatgaaccaaca
acaggaatggaccctaaggcacgtcgggccctctggaacgccatcctgagcatcatcaaa
gagggacgatccgtggtcctcacctcccacagtatggaggagtgtgaagcactctgcacc
agaatggctatcatggtgaacggcaggttccgctgtctgggcagcgtgcagcaccttaaa
aatcggttcggagatggctacaccatcatcttgcgcgtggcagggccggacccggaccta
cggctggtgatggagttcatagagcgggaattgccggggagcacgttgaaggagaaacac
cgcaacatgctgcagtaccagctcccctcttcgctcacctccctcgcccgaatcttctcc
cttctctccaaaaacaaggaggcgctcagcatagaggactactctgtctctcagactaca
ttagaccaagtgtttgttaatttcgccaaggaccaaagtgacgaggaccacttgaaagac
ctccacctgagcaagcgggatgcagtcgtggtggacctttctcaattgaactctttcctc
acggacagcaaaacaagagagagctgcgtctga
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integrated database retrieval system
