Gambusia affinis (western mosquitofish): 122829812
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Entry
122829812 CDS
T07758
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122829812
09123 Folding, sorting and degradation
03018 RNA degradation
122829812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122829812
03041 Spliceosome [BR:
gaf03041
]
122829812
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122829812
mRNA degradation factors
5'-3' decay
Lsm complex
122829812
Spliceosome [BR:
gaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122829812
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
122829812
NCBI-ProteinID:
XP_043970603
LinkDB
All DBs
Position
LG04:3949050..3949967
Genome browser
AA seq
91 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAIEQTEEYVNGQLKNKY
GDAFLRGNNGKEVYIFFINKTVYSDFCKWCQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcagaaaacaaacccccagtgactttctgaagcagattatcggcagacccgtg
gtggtcaagctcaactcgggcgttgattacagaggtgttctggcctgtctggatggttac
atgaacatcgctattgagcagacagaagagtacgtcaacgggcagctcaagaacaagtat
ggagatgcctttttgagaggaaacaatggtaaggaagtatatatattttttataaataaa
actgtatacagcgacttttgtaagtggtgtcaatga
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integrated database retrieval system
