Gambusia affinis (western mosquitofish): 122829838 Help Entry 122829838         CDS       T07758                                  Symbol prpf6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf03040   Spliceosome Brite KEGG Orthology (KO) [BR:gaf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     122829838 (prpf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:gaf03041]     122829838 (prpf6) Spliceosome [BR:gaf03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     122829838 (prpf6)  Complex C    U5 SnRNP specific factors     122829838 (prpf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf TPR_16 HAT_PRP39_C HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N TPR_17 TPR_2 TPR_8 TPR_1 TPR_CcmH_CycH ARM_TT21_N ARM_TT21_5th ARM_TT21_C Mt_ATP-synt_B Motif Other DBs NCBI-GeneID:  122829838 NCBI-ProteinID:  XP_043970644 LinkDB All DBs Position LG01:complement(28892533..28906628) Genome browser AA seq 969 aa AA seqDB search MASNAAKQGTKIVSKTAAAGTAAAGASGGPPIMPLASPLMGKKKKPFLGMPAPLGYVPGL GRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQDDDDEDLNDTNYDEFNG YAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELREKEEIEKYRMERPKIQQQFS DLKRKLAEVSEEEWLSIPEVGDARNKRQRNPRHEKLTPVPDSFFSKHLQSGENHTSVDPL QGLGGLNTPYPGSMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKG YLTDLNSMIPTYGGDISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI MKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRV LRKALENVSKSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARRV LNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEE CDKAGSVATCQAVIRAVIGIGIEEEDRKHTWMEDADSCVAHGALECARAIYAHALQVFPS KKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLANDVPAARSILA LAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIE AAQELCTEALKHYEDFPKLWMMRGQIEEQCENMDKAREAYNQGLKKCPHSVPLWLLLSHL EERVGQLTRARAILEKARLKNPQSPDLWLESVRLEYRAGLKNIANTLMAKALQECPNSGI LWAEAVFLEARPQRKTKSVDALKKCEHDPQVLLAVAKLFWSERKITKSREWFLRTVKIEP DLGDAWALFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCAESKHVLNWQRKTGEILAL VASKIKNTF NT seq 2910 nt NT seq  +upstreamnt  +downstreamnt atggctagcaatgctgcaaagcaaggcactaaaattgtctccaaaacagcagcggcgggc actgccgctgctggggccagtggaggaccccctataatgccccttgcctctccgctcatg gggaaaaagaagaaaccatttttgggcatgcctgctccgctgggctacgttcccggtcta ggcagaggcgctactggtttcaccacacggtcggatatcggtcctgctcgtgatgccaat gatcccgttgatgaccgtcacgcgcccccggggaaaaggacggttggggaccagatgaaa aagaaccaggatgatgatgatgaagacctgaacgacaccaactatgatgagtttaatggg tatgcagggagcttgttctccagcgggccttatgagaaagacgacgaagaagcagacgct atatatgcagctctggacaagaggatggatgaaagacgcaaagaaagaagagaactgaga gaaaaggaagaaattgaaaaatatcgtatggagcgaccaaaaatccagcagcagttctca gatctgaagagaaaactggcagaggtgtcagaggaggagtggctgagcatccctgaagtc ggagatgcacggaacaagcgtcagaggaatccccggcatgagaagctgacccccgtccct gacagcttcttctctaaacacctgcagagcggagagaatcacacctctgtcgatccgttg caggggctgggaggtctgaacacaccgtatccaggaagcatgaccccgggtctgatgact cctgggacaggagagctggatatgaggaagattggccaggccaggaacacgcttatggat atgaggctcagtcaggtttctgattcagtcagtggacagactgttgttgatcctaagggt taccttacagatctcaactccatgattcccacctatggaggagacatcagtgacattaaa aaggctcggctgctgctgaagtcagtgagagagaccaacccccaccatccacctgcttgg attgcttctgccaggctggaggaggtgacaggcaagctgcaggtggctagaaacctgatc atgaagggcacagagatgtgtccaaagagtgaagacgtgtggctggaggctgcaaggctc caacctggtgacacagctaaagccgtggttgctcaggctgtccgccacctaccgcagtcc gtccgcatctacatcagagcagctgagctcgagacagacatcagagccaagaagcgagtc ctcaggaaggctttggagaacgtgtcaaagtcagttcgactatggaaggcagctgttgag cttgaggagccagaagatgccaggattatgctcagcagagctgttgaatgttgccctaca agtgtagagctgtggctggctctggcccgtctagaaacctatgagaacgcccgccgtgtc ttgaataaagccagagagaatatccccaccgatcgccacatctggatcactgctgccaag ctggaagaggccaatggcaacactcagatggtggaaaagatcattgacagagccatcact tctctgcgggctaatggtgtggaaatcaacagagagcagtggatacaggatgcagaggag tgtgacaaagcaggcagtgtggccacctgccaagcggtgatcagggctgtcataggaatt ggcatcgaggaggaggatcgcaagcatacgtggatggaggatgcagacagttgtgtggcc catggagcattggagtgtgccagggccatttatgcccacgccctgcaggtgtttcccagc aagaaaagcgtttggctacgagccgcctactttgagaagaaccacggcaccagggagtct ctggaagcccttctgcagagagctgtagctcactgtcccaaagcggaggtgctgtggctt atgggcgccaagtccaaatggctggccaatgacgttccagctgcaagaagtatcctagcg cttgcttttcaggcgaatcccaacagtgaagaaatctggctggctgccgtcaaactggag tctgaaaacaatgaatacgaaagagcccgtcgactgctggccaaggctcgcagcagcgca ccaacagcccgggtattcatgaaatcagtgaaactagaatgggtgttgggaaacatcgaa gctgcgcaggagttgtgcactgaagctctgaaacattatgaggatttcccgaagctgtgg atgatgcgaggccagatagaggagcagtgtgaaaacatggacaaggccagagaggcttat aaccaagggttgaaaaaatgtccccactcggttcctctgtggctgctgctgtctcatctc gaggaaagagtcggccagctgaccagagccagagcgatcctggagaaagcacgactgaag aacccgcagtcccctgacctgtggcttgagtctgtcaggttggagtacagggctggattg aaaaacatagccaacacattaatggccaaagccttgcaggagtgcccaaattcaggcatc ctgtgggctgaggccgtattcttggaagccagaccccagaggaagacaaagagtgtggac gccctgaagaagtgtgaacatgatcctcaagtcttgctcgctgtggcaaagttgttctgg agtgagcgtaaaatcaccaaatccagagagtggttcctcaggacagtaaagattgaacca gacttgggagacgcttgggctctcttctacaagtttgagctgcagcacggcacagaggag caacaggaagaggtacggaaacgatgtgagaatgcagagccccgccacggagagctgtgg tgcgccgagtccaaacacgtcctgaactggcagaggaagacaggagagattttagcactg gtcgccagcaagattaagaatacattctga

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